BDGP Sequence Production Resources |
Search the DGRC for LP13032
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 130 |
Well: | 32 |
Vector: | pOT2 |
Associated Gene/Transcript | CG12379-RB |
Protein status: | LP13032.pep: gold |
Sequenced Size: | 580 |
Gene | Date | Evidence |
---|---|---|
CG12379 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12379 | 2008-04-29 | Release 5.5 accounting |
CG12379 | 2008-08-15 | Release 5.9 accounting |
CG12379 | 2008-12-18 | 5.12 accounting |
580 bp (580 high quality bases) assembled on 2004-01-31
GenBank Submission: BT011539
> LP13032.complete CAGACAAAATCGAGGATATGTCCGCCCTAAAAAAATTTTATAAAATCAGC GCAGGTGTGAGAAGAGGCGCACTACTTACCAGTTCCCGAAGAACACAAAT TGATGCTTTAAATAGTCCACAATTGCAGTTGCAAGTGCATCACTTTGCAA CCAAAACACAAACAGCTGTTTTTAGCAGCAGCAACAACTACACGTGCATT TGCCGCAGTATACACTGCAGTAAGCCAGTGGACGATGCGGACAAGACGGT GGCCACGAATAGCATTCCTCTGGCGAAACTGGAGGCCAAGATGCAGCTGA TCTACACCTGCAAGGTGTGCCAGACCCGGAACATGAAGACCATTTCGAAG CTGGCATACCAACGCGGCGTTGTTATCGTGACCTGCGAGGGCTGCTCCAA TCACCACCTGATCGCCGACAATCTGAACTGGTTCACAGATCTGGACGGCA AGCGCAACATCGAGGAGATCCTGGCCGAGAAGGGCGAGAAGGTGGTTCGC CTGACCGATGGCAACTGCGAGTTTTTGCCGAAACATGATTAAACTCGTAG TGTAGTTAAGTGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6749..6866 | 117..229 | 127 | 60.2 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9156..9219 | 146..210 | 115 | 66.2 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 126..189 | 146..210 | 115 | 66.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2330..2405 | 147..223 | 112 | 62.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6770..6879 | 117..222 | 109 | 58.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 15623058..15623389 | 231..562 | 100 | <- | Minus |
chrX | 15623547..15623775 | 1..230 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12379-RB | 1..525 | 18..542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12379-RB | 1..525 | 18..542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12379-RB | 1..525 | 18..542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12379-RB | 1..525 | 18..542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12379-RB | 1..525 | 18..542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12379-RB | 1..561 | 1..562 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12379-RB | 1..561 | 1..562 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12379-RB | 58..618 | 1..562 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12379-RB | 1..561 | 1..562 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12379-RB | 58..618 | 1..562 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15733222..15733553 | 231..562 | 100 | <- | Minus |
X | 15733711..15733939 | 1..230 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15733222..15733553 | 231..562 | 100 | <- | Minus |
X | 15733711..15733939 | 1..230 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15733222..15733553 | 231..562 | 100 | <- | Minus |
X | 15733711..15733939 | 1..230 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 15627255..15627586 | 231..562 | 100 | <- | Minus |
arm_X | 15627744..15627972 | 1..230 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15741320..15741651 | 231..562 | 100 | <- | Minus |
X | 15741809..15742037 | 1..230 | 99 | Minus |
Translation from 0 to 541
> LP13032.hyp NKIEDMSALKKFYKISAGVRRGALLTSSRRTQIDALNSPQLQLQVHHFAT KTQTAVFSSSNNYTCICRSIHCSKPVDDADKTVATNSIPLAKLEAKMQLI YTCKVCQTRNMKTISKLAYQRGVVIVTCEGCSNHHLIADNLNWFTDLDGK RNIEEILAEKGEKVVRLTDGNCEFLPKHD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12379-PB | 174 | CG12379-PB | 1..174 | 6..179 | 909 | 100 | Plus |
CG8206-PB | 191 | CG8206-PB | 97..179 | 92..164 | 194 | 44.6 | Plus |
CG8206-PA | 191 | CG8206-PA | 97..179 | 92..164 | 194 | 44.6 | Plus |
Translation from 2 to 541
> LP13032.pep DKIEDMSALKKFYKISAGVRRGALLTSSRRTQIDALNSPQLQLQVHHFAT KTQTAVFSSSNNYTCICRSIHCSKPVDDADKTVATNSIPLAKLEAKMQLI YTCKVCQTRNMKTISKLAYQRGVVIVTCEGCSNHHLIADNLNWFTDLDGK RNIEEILAEKGEKVVRLTDGNCEFLPKHD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22240-PA | 169 | GF22240-PA | 1..168 | 6..179 | 603 | 68.6 | Plus |
Dana\GF19477-PA | 190 | GF19477-PA | 96..148 | 92..144 | 171 | 54.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19380-PA | 121 | GG19380-PA | 19..121 | 77..179 | 548 | 98.1 | Plus |
Dere\GG17905-PA | 191 | GG17905-PA | 95..179 | 90..164 | 184 | 43.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24435-PA | 164 | GH24435-PA | 1..163 | 6..177 | 414 | 51.4 | Plus |
Dgri\GH24157-PA | 181 | GH24157-PA | 100..169 | 92..164 | 185 | 45.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12379-PB | 174 | CG12379-PB | 1..174 | 6..179 | 909 | 100 | Plus |
CG8206-PB | 191 | CG8206-PB | 97..179 | 92..164 | 194 | 44.6 | Plus |
CG8206-PA | 191 | CG8206-PA | 97..179 | 92..164 | 194 | 44.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16194-PA | 108 | GI16194-PA | 7..106 | 77..176 | 422 | 76 | Plus |
Dmoj\GI14660-PA | 187 | GI14660-PA | 96..175 | 92..164 | 194 | 47.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16522-PA | 188 | GL16522-PA | 1..182 | 6..179 | 565 | 60.1 | Plus |
Dper\GL15020-PA | 187 | GL15020-PA | 95..175 | 90..164 | 206 | 44.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11595-PA | 178 | GA11595-PA | 1..172 | 6..179 | 559 | 61.6 | Plus |
Dpse\GA20897-PA | 187 | GA20897-PA | 97..175 | 92..164 | 199 | 44.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22535-PA | 119 | GM22535-PA | 17..119 | 77..179 | 555 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15783-PA | 119 | GD15783-PA | 17..119 | 77..179 | 557 | 100 | Plus |
Dsim\GD17233-PA | 191 | GD17233-PA | 95..179 | 90..164 | 184 | 43.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16534-PA | 165 | GJ16534-PA | 1..162 | 6..175 | 434 | 55.7 | Plus |
Dvir\GJ14731-PA | 181 | GJ14731-PA | 96..169 | 92..164 | 205 | 48.6 | Plus |