BDGP Sequence Production Resources |
Search the DGRC for LP13353
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 133 |
Well: | 53 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5910-RA |
Protein status: | LP13353.pep: gold |
Sequenced Size: | 1167 |
Gene | Date | Evidence |
---|---|---|
CG5910 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5910 | 2004-10-02 | Blastp of sequenced clone |
CG5910 | 2008-04-29 | Release 5.5 accounting |
CG5910 | 2008-08-15 | Release 5.9 accounting |
CG5910 | 2008-12-18 | 5.12 accounting |
1167 bp (1167 high quality bases) assembled on 2004-10-02
GenBank Submission: BT016064
> LP13353.complete GGAATCGGACGTGTGCCCGTCGATCTTGATGCGAAAACCATCGCGGCGTT GGGACAAATACCTACAAGTATCTGTGCACTCCGCCTCCTCACGTGCGTGT GTGATATTTGTAACTTTAATTTATGGGATGCGTTGAATTGTATCCGATCC GATTGCTGCGACCGCAACGAAATAAAACGCCAATGAAACCCAACTAATTG ATGTGATAATGCTGCACATGGAAATCATCCAATTCAGACAACGTCACACG ATGTGGAACTTTTTGGATCGCTTCGAACTGGACGCAGAGGATCGACAGTG CCTCGAGAGATTACAGCAGCCGGCGGAAAGATCCACCGATAAGAGCTTCA CACCAAAGGTCAGTTTGCGTTATCAGCCCGCGATCGTCCCATCATTCCTG TCTATTGGGATTGCGGTGACTATCTGCCTGGGATCTGCCCTCGCCGCTCC GCAATCCTCCTGCATCATGTGCGACAAGGAGGACCTGCGACCACGACTTC CTCCCTACAGCGACAGCTACGAGGAGTACACCTTCGACCACCAGGTGACC CAGCAAGCGGCCCTGGAGTCCATTCAGAAATTTAACGGCTCAAGAGGTCA GAACAATGCCTGCAGTTCAATCAAGTGCCCACCGAATACACCAAAGTATT GCCTAGGCGGTCAGTTTATCAACGACCATTGCTGGTGCGAACTGCAACAC AGAGAAGAGGGCCTGCCCTATGTGCCTCACGTGTGCTTCGCGGATCAGAA GGTGCACACATCATCCGTGGAATCCTGCTTCACATTCGTCCAGGTCAAGG AGTGCTGCTGTGCTGAGATCTGGATCAAGAAGTGGCGTCACATTTCCGGC AGTTCTCGTGGCCAGCACGTGCCAAATGTGTTAGTGCTACTAATATTGAA CCTGCTTTCTGCATTCAGTATACTCACCTGCCGAAGAAGGAGACGAATAT TTTGGCAAAGCTAAGATTTCGAGGGGAAGTCATGATGTGAGAAAACTTGT TGTACAGCGTGAAGTCAGTCATAGAGAAGTAGGATCTAGTCGTAGTAGCA TTCAAATAAGTGTACTTAGTTCAACAAATGTCCAGTGGTAATCAAACTTA CTTGCTAAGCATATATTTAAGCGTTAATAAATACACGTTTATAATGCTAA AAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5910-RB | 1254 | CG5910-RB | 62..1211 | 1..1150 | 5750 | 100 | Plus |
CG5910.b | 1121 | CG5910.b | 69..1083 | 136..1150 | 5075 | 100 | Plus |
CG5910.d | 1194 | CG5910.d | 138..1151 | 137..1150 | 5070 | 100 | Plus |
CG5910.d | 1194 | CG5910.d | 46..137 | 1..92 | 460 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 20434975..20435428 | 137..590 | 2270 | 100 | Plus |
chr3L | 24539361 | chr3L | 20439273..20439587 | 834..1148 | 1575 | 100 | Plus |
chr3L | 24539361 | chr3L | 20434185..20434320 | 1..136 | 680 | 100 | Plus |
chr3L | 24539361 | chr3L | 20438516..20438644 | 706..834 | 645 | 100 | Plus |
chr3L | 24539361 | chr3L | 20435773..20435846 | 591..664 | 370 | 100 | Plus |
chr3L | 24539361 | chr3L | 20435910..20435955 | 662..707 | 230 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 20445948..20446401 | 137..590 | 2270 | 100 | Plus |
3L | 28110227 | 3L | 20450266..20450582 | 834..1150 | 1585 | 100 | Plus |
3L | 28110227 | 3L | 20445158..20445293 | 1..136 | 680 | 100 | Plus |
3L | 28110227 | 3L | 20449508..20449636 | 706..834 | 645 | 100 | Plus |
3L | 28110227 | 3L | 20446746..20446819 | 591..664 | 370 | 100 | Plus |
3L | 28110227 | 3L | 20446877..20446922 | 662..707 | 230 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 20439048..20439501 | 137..590 | 2270 | 100 | Plus |
3L | 28103327 | 3L | 20443366..20443682 | 834..1150 | 1585 | 100 | Plus |
3L | 28103327 | 3L | 20438258..20438393 | 1..136 | 680 | 100 | Plus |
3L | 28103327 | 3L | 20442608..20442736 | 706..834 | 645 | 100 | Plus |
3L | 28103327 | 3L | 20439846..20439919 | 591..664 | 370 | 100 | Plus |
3L | 28103327 | 3L | 20439977..20440022 | 662..707 | 230 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 20438518..20438643 | 708..833 | 100 | -> | Plus |
chr3L | 20439273..20439587 | 834..1148 | 100 | Plus | |
chr3L | 20434185..20434320 | 1..136 | 100 | -> | Plus |
chr3L | 20434975..20435428 | 137..590 | 100 | -> | Plus |
chr3L | 20435773..20435846 | 591..664 | 100 | -> | Plus |
chr3L | 20435913..20435955 | 665..707 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5910-RB | 1..756 | 209..964 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5910-RB | 1..756 | 209..964 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5910-RA | 1..756 | 209..964 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5910-RA | 1..756 | 209..964 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5910-RA | 1..756 | 209..964 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5910-RB | 1..1148 | 1..1148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5910-RB | 1..1148 | 1..1148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5910-RB | 1..1148 | 1..1148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5910-RA | 51..1063 | 136..1148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5910-RB | 1..1148 | 1..1148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20446746..20446819 | 591..664 | 100 | -> | Plus |
3L | 20446880..20446922 | 665..707 | 100 | -> | Plus |
3L | 20449510..20449635 | 708..833 | 100 | -> | Plus |
3L | 20445158..20445293 | 1..136 | 100 | -> | Plus |
3L | 20445948..20446401 | 137..590 | 100 | -> | Plus |
3L | 20450266..20450580 | 834..1148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20446746..20446819 | 591..664 | 100 | -> | Plus |
3L | 20446880..20446922 | 665..707 | 100 | -> | Plus |
3L | 20449510..20449635 | 708..833 | 100 | -> | Plus |
3L | 20445158..20445293 | 1..136 | 100 | -> | Plus |
3L | 20445948..20446401 | 137..590 | 100 | -> | Plus |
3L | 20450266..20450580 | 834..1148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20446746..20446819 | 591..664 | 100 | -> | Plus |
3L | 20446880..20446922 | 665..707 | 100 | -> | Plus |
3L | 20449510..20449635 | 708..833 | 100 | -> | Plus |
3L | 20445158..20445293 | 1..136 | 100 | -> | Plus |
3L | 20445948..20446401 | 137..590 | 100 | -> | Plus |
3L | 20450266..20450580 | 834..1148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 20438258..20438393 | 1..136 | 100 | -> | Plus |
arm_3L | 20439048..20439501 | 137..590 | 100 | -> | Plus |
arm_3L | 20439846..20439919 | 591..664 | 100 | -> | Plus |
arm_3L | 20439980..20440022 | 665..707 | 100 | -> | Plus |
arm_3L | 20442610..20442735 | 708..833 | 100 | -> | Plus |
arm_3L | 20443366..20443680 | 834..1148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20439048..20439501 | 137..590 | 100 | -> | Plus |
3L | 20439846..20439919 | 591..664 | 100 | -> | Plus |
3L | 20439980..20440022 | 665..707 | 100 | -> | Plus |
3L | 20442610..20442735 | 708..833 | 100 | -> | Plus |
3L | 20443366..20443680 | 834..1148 | 100 | Plus | |
3L | 20438258..20438393 | 1..136 | 100 | -> | Plus |
Translation from 208 to 963
> LP13353.hyp MLHMEIIQFRQRHTMWNFLDRFELDAEDRQCLERLQQPAERSTDKSFTPK VSLRYQPAIVPSFLSIGIAVTICLGSALAAPQSSCIMCDKEDLRPRLPPY SDSYEEYTFDHQVTQQAALESIQKFNGSRGQNNACSSIKCPPNTPKYCLG GQFINDHCWCELQHREEGLPYVPHVCFADQKVHTSSVESCFTFVQVKECC CAEIWIKKWRHISGSSRGQHVPNVLVLLILNLLSAFSILTCRRRRRIFWQ S*
Translation from 208 to 963
> LP13353.pep MLHMEIIQFRQRHTMWNFLDRFELDAEDRQCLERLQQPAERSTDKSFTPK VSLRYQPAIVPSFLSIGIAVTICLGSALAAPQSSCIMCDKEDLRPRLPPY SDSYEEYTFDHQVTQQAALESIQKFNGSRGQNNACSSIKCPPNTPKYCLG GQFINDHCWCELQHREEGLPYVPHVCFADQKVHTSSVESCFTFVQVKECC CAEIWIKKWRHISGSSRGQHVPNVLVLLILNLLSAFSILTCRRRRRIFWQ S*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10342-PA | 213 | GF10342-PA | 1..200 | 6..211 | 484 | 46.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16115-PA | 237 | GG16115-PA | 1..236 | 15..250 | 1094 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14548-PA | 201 | GH14548-PA | 66..199 | 79..210 | 455 | 61.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5910-PB | 251 | CG5910-PB | 1..251 | 1..251 | 1365 | 100 | Plus |
CG5910-PA | 251 | CG5910-PA | 1..251 | 1..251 | 1365 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13396-PA | 205 | GI13396-PA | 55..198 | 91..233 | 333 | 47.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12788-PA | 239 | GL12788-PA | 97..235 | 103..245 | 505 | 63.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19221-PA | 229 | GA19221-PA | 1..225 | 15..245 | 669 | 56.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22293-PA | 220 | GM22293-PA | 1..212 | 1..211 | 1079 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14887-PA | 252 | GD14887-PA | 1..249 | 1..248 | 1221 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11521-PA | 232 | GJ11521-PA | 69..232 | 79..246 | 514 | 57.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12290-PA | 235 | GK12290-PA | 71..234 | 79..243 | 525 | 57.6 | Plus |