BDGP Sequence Production Resources |
Search the DGRC for LP14077
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 140 |
Well: | 77 |
Vector: | pOT2 |
Associated Gene/Transcript | RpL3-RA |
Protein status: | LP14077.pep: gold |
Sequenced Size: | 1385 |
Gene | Date | Evidence |
---|---|---|
RpL3-RA | 2008-12-09 | Manual selection by Sue Celniker |
1385 bp assembled on 2009-07-24
GenBank Submission: BT088948.1
> LP14077.complete GAACAGACATGTCTCATCGTAAGTTCTCGGCACCCCGCCATGGCTCCATG GCCTTCTACCCCAAGAAGCGCTCAGCTCGCCATCGCGGTAAGGTTAAGGC CTTCCCCAAGGATGACGCCAGCAAGCCAGTCCATCTGACCTGCTTCATCG GCTACAAGGCCGGCATGACCCACATTGTGCGCGAGGCCGATCGTCCTGGC TCCAAGATCAACAAGAAGGAGGTGGTCGAGGCCGTCACCGTTCTGGAGAC CCCGCCCATGATTGTGGTCGGTGCTGTCGGCTACATCGAGACTCCCTTCG GTCTGCGTGCCCTGGTCAACGTTTGGGCCCAGCATCTCTCCGAGGAGTGC CGTCGTCGCTTCTACAAGAACTGGTACAAGAGCAAGAAGAAGGCATTCAC CAAGGCCAGCAAGAAGTGGACCGATGATCTCGGCAAGAAGAGCATCGAGA ATGACTTCCGCAAGATGCTGCGCTACTGCAAGGTGATCCGTGTGATTGCC CACTCGCAGATCCGCTTGATCAAGCAGCGCCAAAAGAAGGCCCATGTCAT GGAGATCCAGCTGAACGGCGGCTCCATCGAGGACAAGGTCAAGTGGGCTC GCGAGCATTTGGAGAAGCCCATCCAGGTCAGCAACGTCTTCGGCCAGGAC GAGATGATCGACTGCGTTGGTGTGACCAAGGGTAAGGGTTTCAAGGGTGT CACCTCGCGTTGGCACACCAAGAAGCTGCCCCGCAAGACGCACAAGGGTC TGCGCAAGGTGGCCTGTATTGGTGCCTGGCATCCGTCGCGTGTGTCCACC ACCGTGGCCCGTGCCGGTCAGAAGGGTTACCACCACCGTACCGAGATCAA CAAGAAGATCTACCGCATCGGCGCTGGCATCCACACCAAGGACGGCAAGG TCATCAAGAACAACGCCTCCACCGAGTACGATCTGACCGACAAGAGCATC ACGCCCATGGGTGGCTTCCCCCACTACGGTGAGGTCAACAACGACTTCGT CATGATCAAGGGCTGCTGCATCGGCTCCAAGAAGCGCATCATCACCCTGC GCAAGTCCCTGCTGAAGCACACCAAGCGCTCTGCCCTGGAGCAGATCAAG CTCAAGTTCATCGACACCTCGTCCAAGATGGGTCACGGTCGCTTCCAGAC CCCTGCCGACAAGCTGGCCTTCATGGGACCGCTCAAGAAGGATCGTCTCA AGGAGGAGGCTGCCGCTACCACCGCTGCTGCTGCCGCCGCCACCACCACC AGTGCTTAAACAAAATGTCGTGTCCGCGTTCAATTGTCTGCTCGCTTCTA CCACCAACTGCTGCGGTAGGGCAGCGATCAATAAACAGATTTTGGCTAAG CTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 7050080..7050535 | 898..1353 | 2235 | 99.3 | Plus |
chr3R | 27901430 | chr3R | 7049447..7049840 | 508..901 | 1955 | 99.7 | Plus |
chr3R | 27901430 | chr3R | 7047761..7047954 | 11..204 | 970 | 100 | Plus |
chr3R | 27901430 | chr3R | 7048151..7048322 | 205..376 | 800 | 97.7 | Plus |
chr3R | 27901430 | chr3R | 7048985..7049121 | 373..509 | 685 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 11224489..11224945 | 898..1354 | 2285 | 100 | Plus |
3R | 32079331 | 3R | 11223856..11224249 | 508..901 | 1970 | 100 | Plus |
3R | 32079331 | 3R | 11222174..11222367 | 11..204 | 970 | 100 | Plus |
3R | 32079331 | 3R | 11222561..11222732 | 205..376 | 860 | 100 | Plus |
3R | 32079331 | 3R | 11223394..11223530 | 373..509 | 685 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 10965320..10965776 | 898..1354 | 2285 | 100 | Plus |
3R | 31820162 | 3R | 10964687..10965080 | 508..901 | 1970 | 100 | Plus |
3R | 31820162 | 3R | 10963005..10963198 | 11..204 | 970 | 100 | Plus |
3R | 31820162 | 3R | 10963392..10963563 | 205..376 | 860 | 100 | Plus |
3R | 31820162 | 3R | 10964225..10964361 | 373..509 | 685 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 7048986..7049121 | 374..509 | 100 | -> | Plus |
chr3R | 7047759..7047954 | 8..204 | 99 | -> | Plus |
chr3R | 7048151..7048319 | 205..373 | 97 | -> | Plus |
chr3R | 7049449..7049838 | 510..899 | 99 | -> | Plus |
chr3R | 7050082..7050535 | 900..1353 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL3-RA | 1..1251 | 9..1259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL3-RA | 1..1251 | 9..1259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL3-RA | 1..1251 | 9..1259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL3-RA | 1..1251 | 9..1259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL3-RA | 27..1379 | 1..1353 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL3-RA | 29..1381 | 1..1353 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL3-RA | 29..1381 | 1..1353 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL3-RA | 29..1381 | 1..1353 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11224491..11224944 | 900..1353 | 100 | Plus | |
3R | 11222172..11222367 | 8..204 | 99 | -> | Plus |
3R | 11222561..11222729 | 205..373 | 100 | -> | Plus |
3R | 11223395..11223530 | 374..509 | 100 | -> | Plus |
3R | 11223858..11224247 | 510..899 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11224491..11224944 | 900..1353 | 100 | Plus | |
3R | 11222172..11222367 | 8..204 | 99 | -> | Plus |
3R | 11222561..11222729 | 205..373 | 100 | -> | Plus |
3R | 11223395..11223530 | 374..509 | 100 | -> | Plus |
3R | 11223858..11224247 | 510..899 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11224491..11224944 | 900..1353 | 100 | Plus | |
3R | 11222172..11222367 | 8..204 | 99 | -> | Plus |
3R | 11222561..11222729 | 205..373 | 100 | -> | Plus |
3R | 11223395..11223530 | 374..509 | 100 | -> | Plus |
3R | 11223858..11224247 | 510..899 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 7047894..7048089 | 8..204 | 99 | -> | Plus |
arm_3R | 7048283..7048451 | 205..373 | 100 | -> | Plus |
arm_3R | 7049117..7049252 | 374..509 | 100 | -> | Plus |
arm_3R | 7049580..7049969 | 510..899 | 100 | -> | Plus |
arm_3R | 7050213..7050666 | 900..1353 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10964689..10965078 | 510..899 | 100 | -> | Plus |
3R | 10965322..10965775 | 900..1353 | 100 | Plus | |
3R | 10963003..10963198 | 8..204 | 99 | -> | Plus |
3R | 10963392..10963560 | 205..373 | 100 | -> | Plus |
3R | 10964226..10964361 | 374..509 | 100 | -> | Plus |
Translation from 2 to 1258
> LP14077.pep TDMSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIG YKAGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFG LRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIEN DFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAR EHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGL RKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKV IKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLR KSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLK EEAAATTAAAAAATTTSA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16740-PA | 415 | GF16740-PA | 1..415 | 3..417 | 2185 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17978-PA | 416 | GG17978-PA | 1..416 | 3..418 | 2201 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14923-PA | 417 | GH14923-PA | 1..417 | 3..418 | 2169 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL3-PH | 416 | CG4863-PH | 1..416 | 3..418 | 2187 | 100 | Plus |
RpL3-PA | 416 | CG4863-PA | 1..416 | 3..418 | 2187 | 100 | Plus |
RpL3-PD | 161 | CG4863-PD | 1..126 | 3..128 | 662 | 98.4 | Plus |
RpL3-PG | 138 | CG4863-PG | 1..121 | 3..123 | 641 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23698-PA | 415 | GI23698-PA | 1..414 | 3..415 | 2168 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12566-PA | 415 | GL12566-PA | 1..415 | 3..417 | 2192 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18487-PA | 412 | GA18487-PA | 1..397 | 3..402 | 2047 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23925-PA | 611 | GM23925-PA | 1..298 | 3..300 | 1601 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18739-PA | 416 | GD18739-PA | 1..416 | 3..418 | 2222 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23255-PA | 415 | GJ23255-PA | 1..415 | 3..417 | 2165 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14309-PA | 414 | GK14309-PA | 1..413 | 3..415 | 2187 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26079-PA | 416 | GE26079-PA | 1..416 | 3..418 | 2221 | 99.8 | Plus |
Translation from 8 to 1258
> LP14077.hyp QSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYK AGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLR ALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDF RKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREH LEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRK VACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIK NNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKS LLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE AAATTAAAAAATTTSA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL3-PH | 416 | CG4863-PH | 2..416 | 2..416 | 2182 | 100 | Plus |
RpL3-PA | 416 | CG4863-PA | 2..416 | 2..416 | 2182 | 100 | Plus |
RpL3-PD | 161 | CG4863-PD | 2..126 | 2..126 | 657 | 98.4 | Plus |
RpL3-PG | 138 | CG4863-PG | 2..121 | 2..121 | 636 | 100 | Plus |