Clone LP14266 Report

Search the DGRC for LP14266

Clone and Library Details

Library:LP
Tissue Source:Drosophila melanogaster larval-early pupal
Created by:Ling Hong
Date Registered:1998-06-11
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:142
Well:66
Vector:pOT2
Associated Gene/TranscriptCG30286-RC
Protein status:LP14266.pep: gold
Sequenced Size:1352

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG30286-RC 2011-02-22 Manual selection by Sue Celniker

Clone Sequence Records

LP14266.complete Sequence

1352 bp assembled on 2011-03-25

GenBank Submission: BT126274.1

> LP14266.complete
GCTTCATACGCAATGTACTGGATTTTGCTGTTGACGTCTCTCTTGCCATG
GCATCCCCATGCAACTGCCCAATTTCTGGAACCCGATTGTGGATATATGT
CACCGGAGGCACTCCAAAATGAGGAGCACCAGGCGCACATATCCGAGAGT
CCTTGGATGGCTTACTTGCACAAATCTGGCGAGCTTGTATGTGGCGGAAC
TCTCGTAAATCATCGATTCATCCTGACAGCAGCACATTGCATACGAGAGG
ATGAAAACTTGACTGTGCGACTGGGCGAGTTCAACAGCTTAACTAGTATC
GACTGCAACGGCTCCGATTGCCTGCCACCTTCCGAGGATTTTGAAATAGA
TGTGGCCTTCAGGCATGGGGGCTATTCCAGAACCAATAGGATCCACGACA
TTGGACTTCTCCGGCTGGCCAAGTCGGTGGAGTATAAAGGTTCAAGATAC
ATAGATGGCACACATGTATAGATGGCAATGCAAAAGTTTCTCCTTCCCAT
AGTTCACATTAAGCCCATTTGCCTGATCACAAATACGACCCTTCAGCCGA
AGATTGAAAGACTCCACAGGCTGGTAGCCACTGGCTGGGGCCGCAGCCCA
TCGGAAGCTGCAAACCACATCCTAAAGTCCATTCGCGTAACCAGAGTGAA
TTGGGGTGTGTGCAGCAAAACATACTGGGTTGACCGTCGTAGGGATCAGA
TCTGCGTGAGTCACGAGTCCGGAGTGTCGTGCAGCGGCGACTCCGGCGGA
CCCATGGGCCAAGCCATTCGGCTCGACGGTCGAGTGCTCTTCGTTCAGGT
CGGAATCGTTAGCTATGGCAACGCTGAGTGCCTCAGTCCCAGTGTTTTCA
CAAACGTGATGGAACATATTGATTGGATAATGGCGGCGTTGAGCACAACT
CACATTTGAAGAATGCATTCTTTTATCAGCAAAAAATAAAAGTAAAATAA
TTAATTTTAAATCTCATTACAAGAATGTAAAAATTTTGTTCACATGAAAA
TTTTGAAGCGACATCTACCGTTTGTTTGATAAGCGCTATATGTAATTTTT
TACATCTTACACAGTCCTGCCAAGCGCCACCTAGCGTAAATACCGATCAC
CAACTAACACATAACTCACCACTAGCTTAGCGCAGACTCAAACCTATGAC
TGCATTTGTTGAATTTCTAAAATTTTGAATTTTCTAAAAGTATGATAAAA
TTTTTATACAAAAATTGGTCGTCAGTGCAAGTTGCCCAAAGGTATGCTTC
AAATTTAAGCACTACGATTTCAGATAATTTTTCTACATTTCTAGTGTCAA
ATAGAGCAAAACTAGCTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AA

LP14266.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:59:49
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 17421824..17422882 1319..261 5265 99.8 Minus
chr2R 21145070 chr2R 17423041..17423255 215..1 1075 100 Minus
chr2R 21145070 chr2R 17422940..17422986 261..215 235 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:59:47
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21535349..21536423 1335..261 5345 99.8 Minus
2R 25286936 2R 21536582..21536796 215..1 1075 100 Minus
2R 25286936 2R 21536481..21536527 261..215 235 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:09:27
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 21536548..21537622 1335..261 5345 99.8 Minus
2R 25260384 2R 21537781..21537995 215..1 1075 100 Minus
2R 25260384 2R 21537680..21537726 261..215 235 100 Minus
Blast to na_te.dros performed on 2019-03-16 22:59:48 has no hits.

LP14266.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:00:56 Download gff for LP14266.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 17421824..17422882 261..1319 96 <- Minus
chr2R 17422941..17422986 215..260 100 <- Minus
chr2R 17423042..17423255 1..214 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-04-11 16:14:40 Download gff for LP14266.complete
Subject Subject Range Query Range Percent Splice Strand
CG30286-RC 1..459 13..471 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:02:36 Download gff for LP14266.complete
Subject Subject Range Query Range Percent Splice Strand
CG30286-RC 1..459 13..471 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:34:30 Download gff for LP14266.complete
Subject Subject Range Query Range Percent Splice Strand
CG30286-RC 1..459 13..471 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-04-11 16:14:39 Download gff for LP14266.complete
Subject Subject Range Query Range Percent Splice Strand
CG30286-RC 1..649 2..650 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:02:36 Download gff for LP14266.complete
Subject Subject Range Query Range Percent Splice Strand
CG30286-RC 1..967 2..968 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:34:30 Download gff for LP14266.complete
Subject Subject Range Query Range Percent Splice Strand
CG30286-RC 1..967 2..968 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:00:56 Download gff for LP14266.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21535365..21536423 261..1319 100 <- Minus
2R 21536482..21536527 215..260 100 <- Minus
2R 21536583..21536796 1..214 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:00:56 Download gff for LP14266.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21535365..21536423 261..1319 100 <- Minus
2R 21536482..21536527 215..260 100 <- Minus
2R 21536583..21536796 1..214 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:00:56 Download gff for LP14266.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21535365..21536423 261..1319 100 <- Minus
2R 21536482..21536527 215..260 100 <- Minus
2R 21536583..21536796 1..214 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:02:36 Download gff for LP14266.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17422870..17423928 261..1319 100 <- Minus
arm_2R 17423987..17424032 215..260 100 <- Minus
arm_2R 17424088..17424301 1..214 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:02:52 Download gff for LP14266.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21536564..21537622 261..1319 100 <- Minus
2R 21537681..21537726 215..260 100 <- Minus
2R 21537782..21537995 1..214 100   Minus

LP14266.pep Sequence

Translation from 0 to 470

> LP14266.pep
ASYAMYWILLLTSLLPWHPHATAQFLEPDCGYMSPEALQNEEHQAHISES
PWMAYLHKSGELVCGGTLVNHRFILTAAHCIREDENLTVRLGEFNSLTSI
DCNGSDCLPPSEDFEIDVAFRHGGYSRTNRIHDIGLLRLAKSVEYKGSRY
IDGTHV*

LP14266.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 18:43:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13370-PA 505 GF13370-PA 5..134 21..145 197 33.8 Plus
Dana\GF16188-PA 418 GF16188-PA 151..287 28..148 188 37.2 Plus
Dana\GF17682-PA 394 GF17682-PA 129..257 28..143 184 37.9 Plus
Dana\GF23198-PA 392 GF23198-PA 103..252 16..145 180 35.1 Plus
Dana\GF19774-PA 272 GF19774-PA 8..129 8..146 177 32.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:43:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20771-PA 275 GG20771-PA 1..142 5..146 629 78.9 Plus
Dere\GG20540-PA 291 GG20540-PA 20..147 21..146 300 43 Plus
Dere\GG16935-PA 279 GG16935-PA 17..147 21..148 258 40.9 Plus
Dere\GG20542-PA 281 GG20542-PA 10..150 6..147 241 36.1 Plus
Dere\GG16934-PA 251 GG16934-PA 6..145 8..146 238 37.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 18:43:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20292-PA 242 GH20292-PA 4..105 51..144 197 43.1 Plus
Dgri\GH20624-PA 374 GH20624-PA 107..232 30..146 193 37.8 Plus
Dgri\GH17524-PA 374 GH17524-PA 107..232 30..146 193 37.8 Plus
Dgri\GH20291-PA 237 GH20291-PA 13..100 61..144 179 44.3 Plus
Dgri\GH18659-PA 371 GH18659-PA 102..242 25..145 178 33.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:50:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG30286-PC 152 CG30286-PC 1..152 5..156 830 100 Plus
CG30286-PB 277 CG30286-PB 1..142 5..146 775 100 Plus
CG30090-PA 291 CG30090-PA 23..147 24..146 313 45.6 Plus
CG33462-PA 300 CG33462-PA 25..142 26..145 299 44.2 Plus
CG30082-PB 280 CR30082-PB 5..148 7..146 287 41.7 Plus
CG30087-PA 277 CG30087-PA 7..146 7..145 248 39.4 Plus
CG33461-PB 287 CG33461-PB 23..148 21..145 248 38.1 Plus
CG43335-PA 281 CG43335-PA 7..145 9..145 232 35.9 Plus
CG30088-PB 281 CG30088-PB 6..148 1..145 231 37.8 Plus
CG30083-PB 279 CG30083-PB 1..131 5..145 230 37.8 Plus
CG18636-PA 349 CG18636-PA 26..152 23..146 230 37.5 Plus
CG33458-PA 281 CG33458-PA 25..147 26..148 219 39.5 Plus
CG18420-PA 299 CG18420-PA 11..144 8..148 214 35.9 Plus
CG43336-PA 279 CG43336-PA 18..144 22..145 202 36.7 Plus
CG4650-PB 299 CG4650-PB 20..132 22..145 190 35.2 Plus
CG30091-PA 526 CG30091-PA 5..146 7..146 190 32 Plus
CG33459-PA 284 CG33459-PA 5..142 2..145 188 33.1 Plus
CG9733-PB 417 CG9733-PB 150..283 28..145 188 35.1 Plus
CG9733-PA 418 CG9733-PA 151..284 28..145 188 35.1 Plus
Sp7-PF 391 CG3066-PF 126..254 28..143 187 38.6 Plus
Sp7-PE 391 CG3066-PE 126..254 28..143 187 38.6 Plus
Sp7-PA 391 CG3066-PA 126..254 28..143 187 38.6 Plus
CG30288-PC 282 CG30288-PC 23..148 22..151 185 35.8 Plus
CG30287-PA 284 CG30287-PA 8..148 8..145 185 32.2 Plus
CG3505-PA 360 CG3505-PA 92..226 22..140 185 37.2 Plus
CG30098-PA 264 CG30098-PA 46..133 50..145 182 39.6 Plus
CG1773-PA 317 CG1773-PA 9..179 4..146 182 31.6 Plus
CG30289-PA 316 CG30289-PA 47..146 44..145 180 36.9 Plus
MP1-PA 390 CG1102-PA 138..250 49..145 180 43.4 Plus
MP1-PC 399 CG1102-PC 147..259 49..145 180 43.4 Plus
MP1-PE 400 CG1102-PE 148..260 49..145 180 43.4 Plus
grass-PA 335 CG5896-PA 68..194 29..146 179 34.4 Plus
grass-PB 377 CG5896-PB 110..236 29..146 179 34.4 Plus
CG30283-PB 273 CG30283-PB 11..135 8..145 175 35.3 Plus
ea-PA 392 CG4920-PA 103..252 16..145 175 34.2 Plus
CG33465-PC 488 CG33465-PC 19..135 23..145 174 34.1 Plus
ea-PB 261 CG4920-PB 5..121 47..145 172 38.1 Plus
CG14227-PB 286 CG14227-PB 9..152 8..145 172 30.3 Plus
CG33226-PC 292 CG33226-PC 8..152 3..145 167 31.8 Plus
CG11313-PC 367 CG11313-PC 124..237 47..148 162 33.3 Plus
CG30187-PE 489 CG30187-PE 40..130 43..143 162 37.3 Plus
CG30187-PF 500 CG30187-PF 40..130 43..143 162 37.3 Plus
CG30414-PC 305 CG30414-PC 21..167 21..145 161 32.5 Plus
CG30414-PB 305 CG30414-PB 21..167 21..145 161 32.5 Plus
CG16710-PB 372 CG16710-PB 97..231 30..145 158 34.1 Plus
CG43125-PA 258 CG43125-PA 19..129 22..146 156 36.2 Plus
Ser7-PA 397 CG2045-PA 103..250 10..145 155 35.6 Plus
CG31220-PB 363 CG31220-PB 93..233 28..150 154 31.9 Plus
CG10232-PD 509 CG10232-PD 244..378 26..145 153 33.3 Plus
CG10764-PA 523 CG10764-PA 24..133 24..145 153 32 Plus
CG43124-PA 245 CG43124-PA 6..125 7..146 152 30 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 18:43:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22268-PA 380 GI22268-PA 119..244 29..146 192 37 Plus
Dmoj\GI23202-PA 376 GI23202-PA 109..234 29..145 187 36.2 Plus
Dmoj\GI24319-PA 436 GI24319-PA 169..305 28..148 182 36.5 Plus
Dmoj\GI24127-PA 389 GI24127-PA 126..255 28..144 174 36.8 Plus
Dmoj\GI24877-PA 392 GI24877-PA 133..252 44..145 173 37.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 18:43:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11858-PA 345 GL11858-PA 8..152 8..146 337 45.3 Plus
Dper\GL11857-PA 283 GL11857-PA 8..147 8..146 317 45.8 Plus
Dper\GL17488-PA 282 GL17488-PA 10..147 10..145 298 42 Plus
Dper\GL10743-PA 279 GL10743-PA 1..147 9..148 274 39.2 Plus
Dper\GL11321-PA 284 GL11321-PA 3..142 6..143 270 40.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 18:43:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25145-PA 345 GA25145-PA 8..152 8..146 333 44.6 Plus
Dpse\GA15642-PA 283 GA15642-PA 8..147 8..146 316 46.5 Plus
Dpse\GA24176-PA 282 GA24176-PA 10..147 10..145 303 42.8 Plus
Dpse\GA24468-PA 278 GA24468-PA 1..146 8..148 287 38.8 Plus
Dpse\GA24685-PA 284 GA24685-PA 2..142 2..143 261 40.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:43:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15715-PA 277 GM15715-PA 1..142 5..146 684 88.7 Plus
Dsec\GM21631-PA 291 GM21631-PA 20..147 21..146 315 43.4 Plus
Dsec\GM21635-PA 302 GM21635-PA 24..142 25..145 305 46.3 Plus
Dsec\GM21633-PA 279 GM21633-PA 7..147 7..146 253 37.8 Plus
Dsec\GM14686-PA 346 GM14686-PA 14..152 8..146 240 38.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:43:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11133-PA 295 GD11133-PA 20..147 21..146 313 43.8 Plus
Dsim\GD11137-PA 302 GD11137-PA 24..142 25..145 302 45.5 Plus
Dsim\GD25192-PA 240 GD25192-PA 50..108 88..146 301 94.9 Plus
Dsim\GD25604-PA 280 GD25604-PA 17..148 19..146 287 44.7 Plus
Dsim\GD11135-PA 278 GD11135-PA 7..147 7..146 248 37.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 18:43:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21978-PA 296 GJ21978-PA 49..160 43..146 212 38.4 Plus
Dvir\GJ21212-PA 268 GJ21212-PA 2..133 23..146 208 35.6 Plus
Dvir\GJ21214-PA 280 GJ21214-PA 18..145 27..146 207 39.8 Plus
Dvir\GJ24059-PA 397 GJ24059-PA 138..262 29..147 188 37.5 Plus
Dvir\GJ24520-PA 877 GJ24520-PA 618..737 44..145 183 38.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 18:43:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11130-PA 392 GK11130-PA 100..252 13..145 188 35 Plus
Dwil\GK13136-PA 412 GK13136-PA 145..278 28..145 185 37.3 Plus
Dwil\GK12018-PA 384 GK12018-PA 117..247 26..143 176 34.3 Plus
Dwil\GK11884-PA 375 GK11884-PA 121..233 43..145 174 38.1 Plus
Dwil\GK22647-PA 279 GK22647-PA 8..143 10..144 165 33.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:43:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13707-PA 275 GE13707-PA 1..142 5..146 614 76.1 Plus
Dyak\GE11725-PA 296 GE11725-PA 20..144 21..146 304 46.8 Plus
Dyak\GE11730-PA 306 GE11730-PA 24..142 25..145 279 43 Plus
Dyak\GE11727-PA 280 GE11727-PA 7..148 7..146 266 41.7 Plus
Dyak\GE24321-PA 309 GE24321-PA 34..174 8..146 243 36.1 Plus

LP14266.hyp Sequence

Translation from 0 to 470

> LP14266.hyp
ASYAMYWILLLTSLLPWHPHATAQFLEPDCGYMSPEALQNEEHQAHISES
PWMAYLHKSGELVCGGTLVNHRFILTAAHCIREDENLTVRLGEFNSLTSI
DCNGSDCLPPSEDFEIDVAFRHGGYSRTNRIHDIGLLRLAKSVEYKGSRY
IDGTHV*

LP14266.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:22:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG30286-PC 152 CG30286-PC 1..152 5..156 830 100 Plus
CG30286-PB 277 CG30286-PB 1..142 5..146 775 100 Plus
CG30090-PA 291 CG30090-PA 23..147 24..146 313 45.6 Plus
CG33462-PA 300 CG33462-PA 25..142 26..145 299 44.2 Plus
CG30082-PB 280 CR30082-PB 5..148 7..146 287 41.7 Plus