BDGP Sequence Production Resources |
Search the DGRC for LP14411
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 144 |
Well: | 11 |
Vector: | pOT2 |
Associated Gene/Transcript | CG11378-RA |
Protein status: | LP14411.pep: gold |
Sequenced Size: | 1722 |
Gene | Date | Evidence |
---|---|---|
CG11378 | 2010-06-24 | Manual selection by Sue Celniker |
1722 bp assembled on 2011-01-10
GenBank Submission: BT125894.1
> LP14411.complete TTCTGGAGCTCGTTTCCACGCTACCTTCTTCATGATTGGTACCGGAGAGG GATCGGCCCACCACTTGACGAGAAATCATCACTCGCGTTTATCTAGGATT TGTAATTGCCGGAAAAGAATCAGACCCTGGAAAAACTTTGTACTTTGGCC GCAGTGGCCGAAGTGTGAATGATGTCACTGTCGTTTGATTGAACAAAGCC GAAACGCAATCGCACAGTGAGTCAAAGTGCGCACTCACAAGATGAAATAA TGAGCTTTAGAAATACATTAAATGTTTTAACCGTTGTCAGTGATAATCAT TGATATCTGTATCCTATTTCTGCATTATTCGGTTATATATTTAGAAAGAA TTATTATCAGGAAAGACAAAAAGACGAAGTTTACTAGCGATAAGATTGTC GAAATCGGGTTTGGAATGGATTACGACTGAGCCCACTGTGCGGCGTCATC GACGCTTGGTTTCGCTGTGCCATGTCGCTTCGTGCCCTGTAGAAGTCGTT CTCATTCAGTCACGGGCAGCACTTAACCACAGTCGGATCTACAGACGCAC ACCACCGCCACCAACACCACCACATCGACCTATCCATCCATCGCCAGCAT GAACAAGTACGGGATGGTCGGCGTCTGCCTACTGGCTGCTCTGGGCGCTC TGCTCCTGGAGGTCACTGCCTCTCCTTCGTCCGCCGCCTCGTCTAAGGTG GATCCTAGCCAACTTGGCGGACTTTCAGCTCAGTTCTTGCCACCCGAGTA CCGCAACACGAACGTTAGCATCGAGGATATAAAAAGAATATATCGTGAAA AATGCAAGAAGGTAAATGGAGCGGACAACGCAACCTTCTACGAAGAAATC GAGCGGGCGGCAGCCAAGATGAGCACCTGCATCAGCGGGGTGGTCAATCT GACGGCTCTGCAGGAGGAGATGGATGTGGCGAGGCCGAACGGCGACTTGG ACACCGTGTTTAGCAAATACTGTCTCAAGGCACCGGAGGCAGAGGCCTGC GTCAAGGAGTTCAACGACAAGGCGCAGCATTGCTTGACCCCCGAGGAGAA GCGCCACCAGGAGACGGTTACCCGAATTGGAGCGTCCGTTTTGGGATTCG CCTGTTCGCGTGGCGGCGATCAGATTGCCCTCTTCATTGCCGAGCAGGGA CCCGAGTGCCTGGAGGCCAACAAGGAAGCCATTAGCAATTGCCTCAATCA ATCCTTTCATCAGTACATTCCCAAGGATGGCCAAGTTCCGGACCTGATGA GCCGCCCAGAGCTCCTTTTCTCACCCACCCACTGCGTGGACCTGCAGCGC TTCGAGGCCTGTGTCATCCATCATTTGGAGCAGTGCACGCAGATCACCAC CGCTAATATCGTTCAGTCCGTCTTCCGTTTCGTGAAGAACGAGACCGACT GCCAGGCTTGGATGCAGGCACGTGCGAACGAGAAGCCCATTCTGATGGCC GCCTCCAGCAACAACACAGCCCCTGGACTCGCCTACTCCCTGGCCGGCAC TCTTTTGGGCGCCACAATACTCCTGATACTCCCCTGAATGAAAAGCATAG TGAGGTAATCTTTTTTTTTTTTCGATAACAAACGCCTGTGTATTGCGGAC ATTTTTTTTGTTTGTGTGTGTATAGTGGGCACCGAGTATCGGTGCCGTAG TATTTAATGTCTCCTAAGGAATTGCCAATAATAAACGTGATTACGATGAA AAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 1065779..1066704 | 773..1698 | 4615 | 99.9 | Plus |
chrX | 22417052 | chrX | 1065232..1065662 | 343..773 | 2140 | 99.8 | Plus |
chrX | 22417052 | chrX | 1064792..1065135 | 1..344 | 1720 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 1064792..1065135 | 1..344 | 100 | -> | Plus |
chrX | 1065234..1065662 | 345..773 | 99 | -> | Plus |
chrX | 1065780..1066704 | 774..1698 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11378-RA | 1..939 | 599..1537 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11378-RA | 1..939 | 599..1537 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11378-RA | 1..939 | 599..1537 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11378-RA | 1..1195 | 504..1698 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11378-RB | 1..1698 | 1..1698 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11378-RB | 1..1698 | 1..1698 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1170828..1171171 | 1..344 | 100 | -> | Plus |
X | 1171270..1171698 | 345..773 | 100 | -> | Plus |
X | 1171816..1172740 | 774..1698 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1170828..1171171 | 1..344 | 100 | -> | Plus |
X | 1171270..1171698 | 345..773 | 100 | -> | Plus |
X | 1171816..1172740 | 774..1698 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1170828..1171171 | 1..344 | 100 | -> | Plus |
X | 1171270..1171698 | 345..773 | 100 | -> | Plus |
X | 1171816..1172740 | 774..1698 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 1064861..1065204 | 1..344 | 100 | -> | Plus |
arm_X | 1065303..1065731 | 345..773 | 100 | -> | Plus |
arm_X | 1065849..1066773 | 774..1698 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1178926..1179269 | 1..344 | 100 | -> | Plus |
X | 1179368..1179796 | 345..773 | 100 | -> | Plus |
X | 1179914..1180838 | 774..1698 | 100 | Plus |
Translation from 598 to 1536
> LP14411.pep MNKYGMVGVCLLAALGALLLEVTASPSSAASSKVDPSQLGGLSAQFLPPE YRNTNVSIEDIKRIYREKCKKVNGADNATFYEEIERAAAKMSTCISGVVN LTALQEEMDVARPNGDLDTVFSKYCLKAPEAEACVKEFNDKAQHCLTPEE KRHQETVTRIGASVLGFACSRGGDQIALFIAEQGPECLEANKEAISNCLN QSFHQYIPKDGQVPDLMSRPELLFSPTHCVDLQRFEACVIHHLEQCTQIT TANIVQSVFRFVKNETDCQAWMQARANEKPILMAASSNNTAPGLAYSLAG TLLGATILLILP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22134-PA | 321 | GF22134-PA | 1..318 | 1..311 | 1311 | 76.1 | Plus |
Dana\GF22129-PA | 323 | GF22129-PA | 1..280 | 1..270 | 581 | 40.4 | Plus |
Dana\GF19082-PA | 323 | GF19082-PA | 24..257 | 44..274 | 404 | 37.7 | Plus |
Dana\GF22135-PA | 239 | GF22135-PA | 26..212 | 67..270 | 291 | 38.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12830-PA | 309 | GG12830-PA | 1..309 | 1..312 | 1472 | 91 | Plus |
Dere\GG12829-PA | 322 | GG12829-PA | 20..276 | 13..270 | 581 | 43.9 | Plus |
Dere\GG19331-PA | 302 | GG19331-PA | 10..274 | 14..288 | 498 | 38.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11997-PA | 312 | GH11997-PA | 1..289 | 1..293 | 1109 | 71.3 | Plus |
Dgri\GH11994-PA | 322 | GH11994-PA | 15..279 | 6..269 | 550 | 39.3 | Plus |
Dgri\GH12279-PA | 301 | GH12279-PA | 43..294 | 54..303 | 491 | 39.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11378-PC | 312 | CG11378-PC | 1..312 | 1..312 | 1614 | 100 | Plus |
CG11378-PB | 312 | CG11378-PB | 1..312 | 1..312 | 1614 | 100 | Plus |
CG11378-PA | 312 | CG11378-PA | 1..312 | 1..312 | 1614 | 100 | Plus |
CG14629-PA | 319 | CG14629-PA | 17..315 | 13..308 | 571 | 40.2 | Plus |
CG9917-PB | 301 | CG9917-PB | 9..273 | 14..288 | 506 | 38.6 | Plus |
CG9917-PA | 301 | CG9917-PA | 9..273 | 14..288 | 506 | 38.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15624-PA | 312 | GI15624-PA | 1..289 | 1..293 | 1137 | 74.1 | Plus |
Dmoj\GI15617-PA | 322 | GI15617-PA | 37..278 | 30..269 | 561 | 43.9 | Plus |
Dmoj\GI10977-PA | 300 | GI10977-PA | 27..264 | 39..273 | 454 | 40.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14224-PA | 323 | GL14224-PA | 31..289 | 33..279 | 607 | 45.6 | Plus |
Dper\GL14229-PA | 146 | GL14229-PA | 1..142 | 1..141 | 585 | 75.4 | Plus |
Dper\GL21344-PA | 192 | GL21344-PA | 38..187 | 47..195 | 355 | 46.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10959-PA | 319 | GA10959-PA | 1..310 | 1..308 | 1311 | 76.8 | Plus |
Dpse\GA13127-PA | 323 | GA13127-PA | 31..289 | 33..279 | 607 | 45.6 | Plus |
Dpse\GA22121-PA | 303 | GA22121-PA | 38..280 | 47..294 | 529 | 42.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19115-PA | 312 | GM19115-PA | 1..312 | 1..312 | 1643 | 97.8 | Plus |
Dsec\GM19113-PA | 317 | GM19113-PA | 17..313 | 13..308 | 583 | 39.5 | Plus |
Dsec\GM13409-PA | 301 | GM13409-PA | 9..268 | 14..283 | 491 | 38.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16544-PA | 312 | GD16544-PA | 1..312 | 1..312 | 1644 | 98.1 | Plus |
Dsim\GD16543-PA | 317 | GD16543-PA | 17..313 | 13..308 | 583 | 39.5 | Plus |
Dsim\GD15756-PA | 301 | GD15756-PA | 36..268 | 47..283 | 480 | 40.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16336-PA | 314 | GJ16336-PA | 1..307 | 1..311 | 1142 | 72 | Plus |
Dvir\GJ15221-PA | 312 | GJ15221-PA | 7..305 | 8..311 | 599 | 40.6 | Plus |
Dvir\GJ19442-PA | 300 | GJ19442-PA | 36..265 | 47..273 | 504 | 41.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16360-PA | 312 | GK16360-PA | 1..310 | 1..308 | 1244 | 72.8 | Plus |
Dwil\GK16357-PA | 317 | GK16357-PA | 12..293 | 9..279 | 620 | 42.6 | Plus |
Dwil\GK10066-PA | 249 | GK10066-PA | 23..246 | 47..268 | 488 | 41.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16663-PA | 307 | GE16663-PA | 1..307 | 1..312 | 1465 | 91.1 | Plus |
Dyak\GE16661-PA | 322 | GE16661-PA | 1..317 | 1..308 | 597 | 39.4 | Plus |
Dyak\GE15978-PA | 302 | GE15978-PA | 9..268 | 14..283 | 483 | 38.2 | Plus |
Translation from 598 to 1536
> LP14411.hyp MNKYGMVGVCLLAALGALLLEVTASPSSAASSKVDPSQLGGLSAQFLPPE YRNTNVSIEDIKRIYREKCKKVNGADNATFYEEIERAAAKMSTCISGVVN LTALQEEMDVARPNGDLDTVFSKYCLKAPEAEACVKEFNDKAQHCLTPEE KRHQETVTRIGASVLGFACSRGGDQIALFIAEQGPECLEANKEAISNCLN QSFHQYIPKDGQVPDLMSRPELLFSPTHCVDLQRFEACVIHHLEQCTQIT TANIVQSVFRFVKNETDCQAWMQARANEKPILMAASSNNTAPGLAYSLAG TLLGATILLILP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11378-PC | 312 | CG11378-PC | 1..312 | 1..312 | 1614 | 100 | Plus |
CG11378-PB | 312 | CG11378-PB | 1..312 | 1..312 | 1614 | 100 | Plus |
CG11378-PA | 312 | CG11378-PA | 1..312 | 1..312 | 1614 | 100 | Plus |
CG14629-PA | 319 | CG14629-PA | 17..315 | 13..308 | 571 | 40.2 | Plus |
CG9917-PB | 301 | CG9917-PB | 9..273 | 14..288 | 506 | 38.6 | Plus |