Clone LP14756 Report

Search the DGRC for LP14756

Clone and Library Details

Library:LP
Tissue Source:Drosophila melanogaster larval-early pupal
Created by:Ling Hong
Date Registered:1998-06-11
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:147
Well:56
Vector:pOT2
Associated Gene/TranscriptCG14439-RA
Protein status:LP14756.pep: gold
Sequenced Size:2093

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14439 2003-01-01 Sim4 clustering to Release 3
CG14439 2004-10-05 Blastp of sequenced clone
CG14439 2008-04-29 Release 5.5 accounting
CG14439 2008-08-15 Release 5.9 accounting
CG14439 2008-12-18 5.12 accounting

Clone Sequence Records

LP14756.complete Sequence

2093 bp (2093 high quality bases) assembled on 2004-10-05

GenBank Submission: BT016060

> LP14756.complete
CGCAGCCAACTGGACGTGTCCCAAAAAAAAAAAAACAAGCGGCGTTTTTC
GAAGTCCAGGGCAACACATTTCCACGGTTCGGACTGAACAGAATTGTGTG
TTCCTCACCATTTTTTTTTTTTTCCATCGAATTGTTTGTTCTGTTCATCG
GCCCCAATATGATACCTATTCTGGAGAAACTCAGCGGGTTCTACAACACC
TACGTCTTGGCCGTACTCACCATTGGTTATATCCTGGGCGAATTGGGTCA
CTATCTGATCGGAGTGACCTCCAAGCAGACGGCCATTGAGTTGGACTACG
GTGATCATGCCTGCCAGCAGAACACCTCGATGTTCAATCGCCACGAGTTG
CCCACCCAGTGCTCGGCGGTTATGAATGAGACCAGCTGCTATGCCCTTGA
TTTCAACGGCACTGGCTATTGCGAGTGGAACTACAATGGACTGGGCATCG
ACTACCAGATCCTGGCCGGACCCACCTTCATCCTGATTTTCACCATCGCC
GGCGTATTTATGGGCTTCGCAGCGGACAAGTACAATCGCGTCAACATGCT
GACTGTGTGCACAGTGATCTTCGGCATTGCCATGATTCTGCAGGGCACCG
TTAAGGAATACTGGCAGCTGGTAATTTTGCGTATGATCATGGCAGCCGGC
GAGTCGGGTTGCAATCCCTTGGCCACGGGCATTATGTCCGATATCTTTCC
GGAGGATAAGAGAGCACTAGTCATGGCCATCTTCAACTGGGGAATTTATG
GAGGATATGGAATCGCCTTCCCCGTGGGTCGCTACATCACCAAGCTGAAT
TTCTGGAATCTGGGATGGCGCGTTTGCTACTTGGGCGCCGGTGTCCTTAC
CGTAATTATGGCCGCACTGACCGGAACCACTTTGCGGGAGCCGGAGCGCA
AGGCCATCGGTGAGGGTGACCGCCAGACGTCTAGCGGCAAACCAGTGAGC
CTGTGGCAAGTTATCAAGAATCCGGCAATGATCATGTTGATGATTGCCGC
GTCCATCCGTCACTGCGGTGGCATGACCTTTGCCTACAACGCCGATCTCT
ACTACAACACGTACTTCCCCGACGTGGACTTGGGCTGGTGGCTCTTTGGG
GTCACCATTGGCATTGGCAGCGTGGGTGTGGTCGTCGGTGGCATTGTGTC
GGACAAGATTGTCGCCAAGATGGGCATTCGATCACGCGCCTTTGTATTGG
CTGTTAGCCAGCTAATTGCCACACTACCAGCCTTCGGATCGGTCTACTTT
GACCCGCTGTGGGCCATGATCACGCTGGGCCTGAGTTATTTCTTCGCCGA
GATGTGGTTCGGTATTGTCTTTGCCATTGTTGTGGAGATTGTTCCGCTGC
GCGTTCGCTCCTCGACCATTGGCGTCTTTCTGTTTGTGATGAACAACATT
GGCGGCAACCTGCCCATCCTGGTGGATCCGGTGGCCAAGATCCTGGGCTA
TCGCGGTTCGATCATGATCTTCTACGCTGGATTCTACGGCATCAGTTCTA
TTCTCTTCTTCATCACCTGTTTCCTGCTGGAAGGCAAGCCTGATGAGGTG
GGACAGCCGGAGTCGCCGAAGAGCCATCCGGATGCCGTGCTCAATGCTCG
CCACATGCACGGACACGACAACTCCGTGTTCTCCGTGGACGAGACCTTGC
CCTCCAACGGACGTCCTGCCCAACTTCCGCAGCATCTGCAGATGTCCAGC
AATGGATACGACAAGTCCCAGATTTCTCCGCCACGACAAAATGGCGCGGA
GAGCAGTAGACTATAGATTAGCTTAAGCTCCGGAGTGTTTTTTTTTTTTT
ATTAATTAATATTATGCAATTTTTATGTTAGGTTGTTAAGATACCTGCTT
CAAATTCGGCTAACTGATAATTCGATATCTGCTTTACATCAGATATCAGT
TCTTAACAAATATGCCCGAATCCGGAGCAGGTGTCCTTGCACCCAGCAAT
CATAGGCCTAAGCGATGGATCCCCGAGATTCCCGCAACACTGTATTTTTA
GCGCGATAACTGTGTACTTAATTCGCCAGGCGATTACAAGTGTACAACTT
TAATAAAGTGCTGTTTTGTTAACATAAAAAAAAAAAAAAAAAA

LP14756.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:57:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG14439.c 2646 CG14439.c 359..2294 143..2078 9680 100 Plus
CG14439-RC 2420 CG14439-RC 359..2294 143..2078 9680 100 Plus
CG14439.b 2778 CG14439.b 491..2426 143..2078 9680 100 Plus
CG14439.c 2646 CG14439.c 17..160 1..144 720 100 Plus
CG14439-RC 2420 CG14439-RC 17..160 1..144 720 100 Plus
CG14439.b 2778 CG14439.b 17..160 1..144 720 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:24:39
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 6645896..6647247 145..1496 6700 99.7 Plus
chrX 22417052 chrX 6647306..6647885 1495..2075 2735 98.5 Plus
chrX 22417052 chrX 6639677..6639821 1..144 540 94 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:56:53 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:24:37
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6753762..6755113 145..1496 6760 100 Plus
X 23542271 X 6755172..6755755 1495..2078 2920 100 Plus
X 23542271 X 6747565..6747708 1..144 720 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:45:56
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 6761860..6763211 145..1496 6760 100 Plus
X 23527363 X 6763270..6763853 1495..2078 2920 100 Plus
X 23527363 X 6755663..6755806 1..144 720 100 Plus
Blast to na_te.dros performed 2019-03-15 19:24:38
Subject Length Description Subject Range Query Range Score Percent Strand
transib3 2883 transib3 TRANSIB3 2883bp 2613..2790 1878..1701 159 58 Minus
gypsy7 5486 gypsy7 GYPSY7 5486bp 331..377 1839..1794 115 79.6 Minus

LP14756.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:25:33 Download gff for LP14756.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 6639677..6639821 1..144 93 -> Plus
chrX 6645896..6647245 145..1494 99 -> Plus
chrX 6647306..6647885 1495..2075 94   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:42:44 Download gff for LP14756.complete
Subject Subject Range Query Range Percent Splice Strand
CG14439-RA 1..1608 159..1766 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:30:57 Download gff for LP14756.complete
Subject Subject Range Query Range Percent Splice Strand
CG14439-RC 1..1608 159..1766 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:50:31 Download gff for LP14756.complete
Subject Subject Range Query Range Percent Splice Strand
CG14439-RA 1..1608 159..1766 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:14:49 Download gff for LP14756.complete
Subject Subject Range Query Range Percent Splice Strand
CG14439-RA 1..1608 159..1766 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:17:23 Download gff for LP14756.complete
Subject Subject Range Query Range Percent Splice Strand
CG14439-RA 1..1608 159..1766 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:35:32 Download gff for LP14756.complete
Subject Subject Range Query Range Percent Splice Strand
CG14439-RA 17..1782 1..1766 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:30:57 Download gff for LP14756.complete
Subject Subject Range Query Range Percent Splice Strand
CG14439-RA 17..2091 1..2075 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:50:31 Download gff for LP14756.complete
Subject Subject Range Query Range Percent Splice Strand
CG14439-RA 22..2096 1..2075 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:14:49 Download gff for LP14756.complete
Subject Subject Range Query Range Percent Splice Strand
CG14439-RA 17..1782 1..1766 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:17:23 Download gff for LP14756.complete
Subject Subject Range Query Range Percent Splice Strand
CG14439-RA 22..2096 1..2075 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:25:33 Download gff for LP14756.complete
Subject Subject Range Query Range Percent Splice Strand
X 6747565..6747708 1..144 100 -> Plus
X 6753762..6755111 145..1494 100 -> Plus
X 6755172..6755752 1495..2075 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:25:33 Download gff for LP14756.complete
Subject Subject Range Query Range Percent Splice Strand
X 6747565..6747708 1..144 100 -> Plus
X 6753762..6755111 145..1494 100 -> Plus
X 6755172..6755752 1495..2075 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:25:33 Download gff for LP14756.complete
Subject Subject Range Query Range Percent Splice Strand
X 6747565..6747708 1..144 100 -> Plus
X 6753762..6755111 145..1494 100 -> Plus
X 6755172..6755752 1495..2075 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:50:31 Download gff for LP14756.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 6641598..6641741 1..144 100 -> Plus
arm_X 6647795..6649144 145..1494 100 -> Plus
arm_X 6649205..6649785 1495..2075 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:51:41 Download gff for LP14756.complete
Subject Subject Range Query Range Percent Splice Strand
X 6761860..6763209 145..1494 100 -> Plus
X 6763270..6763850 1495..2075 100   Plus
X 6755663..6755806 1..144 100 -> Plus

LP14756.hyp Sequence

Translation from 2 to 1765

> LP14756.hyp
QPTGRVPKKKKQAAFFEVQGNTFPRFGLNRIVCSSPFFFFSIELFVLFIG
PNMIPILEKLSGFYNTYVLAVLTIGYILGELGHYLIGVTSKQTAIELDYG
DHACQQNTSMFNRHELPTQCSAVMNETSCYALDFNGTGYCEWNYNGLGID
YQILAGPTFILIFTIAGVFMGFAADKYNRVNMLTVCTVIFGIAMILQGTV
KEYWQLVILRMIMAAGESGCNPLATGIMSDIFPEDKRALVMAIFNWGIYG
GYGIAFPVGRYITKLNFWNLGWRVCYLGAGVLTVIMAALTGTTLREPERK
AIGEGDRQTSSGKPVSLWQVIKNPAMIMLMIAASIRHCGGMTFAYNADLY
YNTYFPDVDLGWWLFGVTIGIGSVGVVVGGIVSDKIVAKMGIRSRAFVLA
VSQLIATLPAFGSVYFDPLWAMITLGLSYFFAEMWFGIVFAIVVEIVPLR
VRSSTIGVFLFVMNNIGGNLPILVDPVAKILGYRGSIMIFYAGFYGISSI
LFFITCFLLEGKPDEVGQPESPKSHPDAVLNARHMHGHDNSVFSVDETLP
SNGRPAQLPQHLQMSSNGYDKSQISPPRQNGAESSRL*

LP14756.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:52:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG14439-PC 535 CG14439-PC 1..535 53..587 2815 100 Plus
CG14439-PB 535 CG14439-PB 1..535 53..587 2815 100 Plus
CG14439-PA 535 CG14439-PA 1..535 53..587 2815 100 Plus

LP14756.pep Sequence

Translation from 158 to 1765

> LP14756.pep
MIPILEKLSGFYNTYVLAVLTIGYILGELGHYLIGVTSKQTAIELDYGDH
ACQQNTSMFNRHELPTQCSAVMNETSCYALDFNGTGYCEWNYNGLGIDYQ
ILAGPTFILIFTIAGVFMGFAADKYNRVNMLTVCTVIFGIAMILQGTVKE
YWQLVILRMIMAAGESGCNPLATGIMSDIFPEDKRALVMAIFNWGIYGGY
GIAFPVGRYITKLNFWNLGWRVCYLGAGVLTVIMAALTGTTLREPERKAI
GEGDRQTSSGKPVSLWQVIKNPAMIMLMIAASIRHCGGMTFAYNADLYYN
TYFPDVDLGWWLFGVTIGIGSVGVVVGGIVSDKIVAKMGIRSRAFVLAVS
QLIATLPAFGSVYFDPLWAMITLGLSYFFAEMWFGIVFAIVVEIVPLRVR
SSTIGVFLFVMNNIGGNLPILVDPVAKILGYRGSIMIFYAGFYGISSILF
FITCFLLEGKPDEVGQPESPKSHPDAVLNARHMHGHDNSVFSVDETLPSN
GRPAQLPQHLQMSSNGYDKSQISPPRQNGAESSRL*

LP14756.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 17:51:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21429-PA 535 GF21429-PA 1..535 1..535 2633 94 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:51:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19608-PA 535 GG19608-PA 1..535 1..535 2828 99.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 17:51:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12130-PA 536 GH12130-PA 1..536 1..535 2503 89 Plus
Dgri\GH12563-PA 505 GH12563-PA 1..505 1..535 2230 82.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:22:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG14439-PC 535 CG14439-PC 1..535 1..535 2815 100 Plus
CG14439-PB 535 CG14439-PB 1..535 1..535 2815 100 Plus
CG14439-PA 535 CG14439-PA 1..535 1..535 2815 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 17:51:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16342-PA 537 GI16342-PA 1..537 1..535 2461 88.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 17:51:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26748-PA 316 GL26748-PA 1..313 130..442 1475 94.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 17:51:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12986-PA 542 GA12986-PA 1..542 1..535 2541 91.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:51:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12522-PA 535 GM12522-PA 1..535 1..535 2840 99.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 17:51:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15678-PA 536 GJ15678-PA 1..536 1..535 2511 89.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 17:51:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16301-PA 542 GK16301-PA 1..542 1..535 2490 89.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:51:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16770-PA 535 GE16770-PA 1..535 1..535 2822 98.9 Plus