Clone LP15943 Report

Search the DGRC for LP15943

Clone and Library Details

Library:LP
Tissue Source:Drosophila melanogaster larval-early pupal
Created by:Ling Hong
Date Registered:1998-06-11
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:159
Well:43
Vector:pOT2
Associated Gene/TranscriptCG34371-RA
Protein status:LP15943.pep: gold
Sequenced Size:5762

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG34371 2008-07-21 Manual selection by Ken Wan

Clone Sequence Records

LP15943.complete Sequence

5762 bp assembled on 2009-08-13

GenBank Submission: BT099587.1

> LP15943.complete
ATTCAAGCGTTGTGGTACTCGAATTGAAAATCGCACGACGCGCGGCTGTT
GCGTTCAAATAGTTGTGTTCGATCGAAAATGCTTTTGTGGCAAGTAGTGC
TAGAAATCGAGTCGAATCGGAATCGGTAGTAAAAAAATCCAAAAGTGACC
AAATCCAGTGCCACCGAAAGCCCAAAAATCCCTTAAGTGGCTCGTTCGTC
GCGAGTTGTGGCAACTTCGTGAGAGAAAAACAGGGTAGCAAAACGAGTAA
TTGAATCCTCATTCTGGACATCCAAAGTCATATAATCGCAGTTTTCTGAA
GTTGGTGTACCGTGAAATGTTGCTGCTGCAACTGCCGCAAATCCGTGTGG
CACAGTGTCAGTGATTGAGAATTATAAGCTTCGAGTTCAAGGTACTGCAG
CATGACGCCAAGCGGATTACACACAAGGATTAAATAACAAATGGCGAATG
TCAGTCACAGCCAGCGATTGATGATGGAAAAATCGAACTGAACAGCAAAT
CGAGCAGTGCGGAGAAAACCCAACTAAAAAGATGAGATTGAAAATGCAAG
CAGCTGCAGGAAAAAGCGAGAAAAACACGAAATCCCTGCCAGACCAAATG
GGAAACTTATGAAAAGCACTACAACCGAACAAGAGCCAGGAAAAGCGAGA
AACAACGTAGGAAAGCGGAAAATTAAAGCAACAATTACAGGGGAATCGGG
GCCAAGAACCCTAGAGAGCACACAAAAATAATAAACGGTCTTCAGGAAAA
GTCGCGACTGCAAAACAACGCCAAAGCAAAGGATTCCCATAGAAATACCC
GCGAAAATGGATACATTTTCCGCTGCGGTTTTCCCCCGGCAGCCGGTGGC
TTTCGTCCTGGTCCTGGCCACAGCTCTTTCCCTGGTCCAAGGTGAACAGC
ACCCCGCCACTGCAGACGAAGGACCCCTATCCGAGATTCTCACTGCCGTT
GGTTCCGAGGTGGCGCTCCCATGCGATCTGGTGCCCGGAACTGGGATCGT
CGACAAGGTGCAGCTGGTCATCTGGTATCGCCAGGGAAACGTGAAGCCCA
TCTATACCTTTGATGCGCGAGGTCGTCCATTGAATCTGGGCATTCCCTGG
GCAGATGAAAGTGTGTTCAACAAGAAGGCCCACTTCCACCACGACACAGA
TCCTCCTGCCCTGCGGATCAAGAACATTCAAACCTCCGATGCCGGACTCT
ACAAGTGCCGAGTGGACTTCCACAAGTCACCAACTCGCAACTGGCGCATC
AATGTAACAGTGCTAGTTCCACCCACTGCGCTGACCATCCTGGATCACCA
TGGGGCCGAGATCCGGGACCAGACGGCAGGACCGTACCTGGAAGGCGACA
GCATCGACCTCACCTGCCTCTCGAGCGGCGGAGTTCCTCCTCCGCGGGTC
TCCTGGTGGCGGGAGCACGCCCTGATCGACGACTCCTTTCAGGTGCTGCC
CGACGGCTCCGTGCGGAATGTCCTGCGCCTCAAGAACATTCAGCGGAAGG
ATCTCCTCACGATGTACACCTGCCAGGCGAGCAATGGCCACGTGGTTCCA
GCGCTGACCAAGAAGGTTATCCTCGACATGAATCTTCCCCCACTTAGTTT
GCTTTTGCAAGGCCTTAACCATGCCGTAATTGCTGGAACCCGATCCCACG
TTACTTGCACGGCCATTGGCGCTCGTCCTCCGCCGGAAATAATCTGGTCT
AAGGCGGGACAGATTGTGCGGGGAGCCACCTCCTCGACGTCGTCCGATGG
GAACACAACCATATCGGAACTGATGCTGATTCCCGTTCCCGAGGATAATG
AACGCCAGGTGGTCTGTTCCATTTCGCTGAATGCGGGGATTACCTCCCAG
CAGCTGCATGAGGGCCACACCACTGTGATGACTACTCTGGGCAATGGACA
CACCGGACTCTATCTGAAGGATTCCAGGGTGCTCAATGTGACGCATGCAC
CCATTGTCAACCTTAACCTGGGCGCTCCTCTCGATCCGGATAATCTGCTC
AAGGGCACCGATGTCTACTTGGAGTGCGATGTGAAGGCGAATCCCGCGAT
TACACGTGTGGAGTGGTACCACAGTGATAAGCAATTGCATTCCTCCCGCG
GCATCATCATCTCCAACCAGACCCTCGTCCTCCAGGGCATTTCCAAGTCC
TCGCACGGCCAGTACTTCTGTCGGGCCTCAAATCTCCAGGGCAGTGTGTC
CAGCAATGAGGTGTACTTGGATGTGAAATATCCACCCGTTTGCAAGTCGG
AATCGACGATTATACGTGCCGCGCTCAAGCAGACAATCAACATCACCTGC
GAGGTGGACGCGAATCCAGTCGATAATCTAAATTACAAGTGGCACTTCAA
CAACTCGCTGGAGAGCCTCATCGAGCTGCCCCAACTGGGCCAGGGGGCTC
CGGTGATGCTGGCCTCCGGATCGGACCAGAGCGGATATTATCAGCGGAGC
AAGCGGAAGCACTCGCACGGAATGCAGCAACGCCTGCTCCACGGCAGGCA
TGGCCGCATGGCGGCGGTGAGGTTCGAGGATGAGGACGAGGACGGCTACG
GCGAGTTCGAGGAGTATGGCGACGAGGTGGGCCAGCCCTTCACCCAGATG
GTCTACTCGAACATGGTGCACAAGAACCACGTTGAGAGCAGCAAGCAGCA
GCAGCGGAAGCAGCTGTCCCCTCAGCAGCAGCAGCAGCAGCAGCAGATGG
CATCCGGCGGCTCGTCCGGAGACAGCCACACCCCCTCCGGCGGAGTCATC
CTGGAGCGCAAGCGACTGGTGGCCCTGCACAAGCAGCACCACCGAGGCGG
CGTGGCCACGCCCCCGACCACCACCGCCGCGCCCCCGCTGAACAACGTGT
ATAGCTACCACGTAGAGAGCTACGAGAGCTTCGGCGCCATTTCCTGCGTG
GCCAGCAGTCCGATGGGCCACAGTGCGCCCTGTTGGTATCACATCCAGCC
GGCAGACCTTCCCGAACCCGTGAAGAACTGCACGGCCTACAATGCCACGG
CCAATTCGCTGCAGATTCAGTGCATTCCCGGCTACGATGGCGGCATTCCG
CAACACTTTCACGCCCAGATCTACGATGAACTGAACCGACAAATCCTTTA
CAATGCCTCGTACAAGTACTCGGAGTTCACGGTGAAGCGCCTGCCCAGCG
ACTCCGTGTTTGTCATCCGGATAACGGCGGTGAATGCCCAGGGAGCCAGC
AAGGTGGCATATCGTCTGCGGGGACGCACGCTTTCGGCTCCTCTGCTGCG
GACAGCCTCATCGACGGCGGTGCTGGTGCAACTGACACCCCTGCTGGGCG
CCCTGGTCGGCGTGATTGCCACACTCATTCTGGTGGCCATTTGCGTGGTG
ATCGTTATCAAATTCCGGAGCAAGCGGGGCGGCAGGCGGCACGGATCGGG
CGCGGATGCCACCACCACGGAGGCGGACAAGGGCAGTGCGGAGCCGCTGT
CTCGCAACATGGGCAGCCACTCCAGCCTCGAGGACAAAAATCCGGACGTG
GTGCCCCAGGAGGCCAACAGCGAGGACGAGTTTCACCAGGAGGAGAAGGC
CTTCGACCGATTGAATATGGAATCACAGCGGATTTTATACACCCCGCCGA
CGCGGATTAACACCGCCTCTCCGCCGCCGCCCTCGCTGTCGCCCACCTTT
GGCAAGCAGTACGGTGAACTGTCGCTAACCACGAATCCTGCCTTCAGCCT
GTACAACACGCCCCAGCGCGCTCCTGCCGTTCAGCGACCCGTTTACACCG
CCCCGCCGCCCCTTCTGTCCACAAGGACGCCCCCGAATATCTACACCCGC
ATCCCGGGTCGCGGGGGCGGTGGAGGCGGAGCAACGGTCACGGCGGCTGG
AGCCGGCGGCTACCACTTGCCAGCGTACGAGACCCGCACTTCGCCCACCT
CTCCGTATGGATCCACCACCACGTGCACGATGCCCCTGCTGGGCGGCCAG
TCCAATGGCTCGCTGCAGAGCGGCGGAGTGGGCGGCGTGGGTGGCCTGGT
GGGCGGTGGGGCATGCAACACGCTGCCCCACCCGGGAAGCCTGCATGTGG
GCGGCATTTCGGCGGCCCTGACCAGCTCGGTGACCAGCGGAAACATCACC
ATCGGAGCGGCCCAGTCGCTGCTGACGTCGCCGCGCTCACAGACGGCCAC
GTACAGCACCACTTTGGGTGGAGTGCAGTCGCCACTCCTGATGGGCGGCG
GCGGGAACTACGAGACGGTGAGCTCCTGAGAGTTAGCCAAAGAGGACATC
AAGTGTCAGATCGTGTGCATTGGGGGGAGCAGCACGTGCACCACCAGCAC
CTTGGGCGCCGAGCGCACCACCATTGTCTAAGGATGATCGCGGTGGTAAC
TGAATCCCAAAATCTGTATTATAGTAGTTAAGCTGCATTGAAAACTCGAC
AAGACTTCCACACAAAAGGAGCAGCGGAGCAGATGGAAATTAGGTTTAAG
GATTCATAATTGTAGATGTAGCCTTTACGTACGTTTACTGGATTTAGCAC
TGCTTTCGAACCCGACTAACGTGTAAAGTGTGAGTGGAAGCCACAAGGAG
AAGCATTTATTTGACTTAACTACTGTACTGTACAACTCAATTCTGTCTTT
TGTGCGCAAACAAAACGTAACATAATATAATAATAACAACTAAAGAGTGG
AATACTTCAGTGAACACAATGAGCTATGCTTGTGAAATTAACGAGAAATT
AGTTTAGACTCCAAAACTAAGAGATTTACTGAATCGCAACTAGTTAAGCT
ATAGATGTGTATATATGTAACTTAAATTAGGATCAGGTCAGCTAATACAT
AAACTAGTTTACGACTTAGCCACTTAATGTAGCCTAAACTAAATTGAACT
TAGTTAGTCACATTGCGAATCTACGAAAAGACTATCCCCCTGATCATATA
TATGATAAATAACAGAATTTAATGGCATATCTCTATATCGAAATAATACA
TATAGCACAACTCAGCAGCAGCAGCAGTCCACAAGGAATCTGAAATAGGC
GCAAACTATATAGTTTAAAAAATAAAGGGTATATCGAAACGAAACGAAAC
GATACGATACGATACAATACGATGTGGTGTGGATTGAAATGGATTATATA
GTACTTGTATATGGGCATCGAATCATATTTTGTTAAGTGTGGTATGAAAT
TTTATAAGCATCTGTTGTCGAGAACTTTATCAAATCTATATAGTACGAAT
ATATAAATGATCTGTATGTATCCATGATTAAGCTGCGCGCAATGAAAGTA
AAAACAAAAGTTCAATGTGTCTCCTCCGCCAACCACCTACCTGCCCAAAG
AAAAGCCCTTTTCCAATTCAAAATAGTCGCTCTAAGGTCAAACTAAAAGT
TTTCCCATTTACTGATTCTTTCCACGATCACAATCACACCCCTCCTCCCA
CCATGAGAAAAACCAACATCGAAAGTGCTTCTTCAATGACAAAATCAAAT
TGAATTGTGACTCGAATTATAAATTGGACAAACGAATACTTAAGAATGAA
ATTTAATTTAATTTTAGAAGCTAAGAACTTTCGACTCTACAAATATAAAG
TTAGGCAATAATATATTTTCTTAATTAACCCTTTTTTTAAGCGAATTGAA
TATTTATTTTCCGAGTTCCGAGCGAGCATCATTCAGTTTCATTTAGTTCT
CTTCGATGTAAAGCAAATGATCACTTAATATTGCAAATGATGAAAAACAA
GTGAAAATAAGTGAGCAACAAATAAAGAACAAAATGTGTATTAAAAAAAA
AAAAAAAAAAAA

LP15943.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:30:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG34371-RA 5780 CG34371-RA 15..5762 1..5746 28670 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:20:41
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 19049472..19051560 5742..3656 9990 98.9 Minus
chr2R 21145070 chr2R 19054509..19055228 2955..2230 3490 99 Minus
chr2R 21145070 chr2R 19077547..19078027 922..442 2390 99.8 Minus
chr2R 21145070 chr2R 19089910..19090350 441..1 2190 99.8 Minus
chr2R 21145070 chr2R 19052422..19052828 3659..3253 2005 99.5 Minus
chr2R 21145070 chr2R 19053174..19053476 3255..2953 1515 100 Minus
chr2R 21145070 chr2R 19058941..19059187 1511..1265 1205 99.2 Minus
chr2R 21145070 chr2R 19055895..19056103 1944..1736 1045 100 Minus
chr2R 21145070 chr2R 19059251..19059459 1266..1058 1030 99.5 Minus
chr2R 21145070 chr2R 19055435..19055588 2229..2076 770 100 Minus
chr2R 21145070 chr2R 19056167..19056318 1736..1585 760 100 Minus
chr2R 21145070 chr2R 19062606..19062743 1057..920 690 100 Minus
chr2R 21145070 chr2R 19055706..19055837 2076..1945 660 100 Minus
chr2R 21145070 chr2R 19057037..19057110 1584..1511 370 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:57:12 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:20:39
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23163008..23165100 5746..3656 10400 99.9 Minus
2R 25286936 2R 23168050..23168775 2955..2230 3630 100 Minus
2R 25286936 2R 23191124..23191604 922..442 2405 100 Minus
2R 25286936 2R 23203517..23203957 441..1 2190 99.8 Minus
2R 25286936 2R 23165964..23166370 3659..3253 2035 100 Minus
2R 25286936 2R 23166716..23167018 3255..2953 1515 100 Minus
2R 25286936 2R 23172487..23172733 1511..1265 1235 100 Minus
2R 25286936 2R 23169442..23169650 1944..1736 1045 100 Minus
2R 25286936 2R 23172797..23173005 1266..1058 1045 100 Minus
2R 25286936 2R 23168982..23169135 2229..2076 770 100 Minus
2R 25286936 2R 23169714..23169865 1736..1585 760 100 Minus
2R 25286936 2R 23176151..23176288 1057..920 690 100 Minus
2R 25286936 2R 23169253..23169384 2076..1945 660 100 Minus
2R 25286936 2R 23170584..23170657 1584..1511 370 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:26:40
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 23164207..23166299 5746..3656 10410 99.9 Minus
2R 25260384 2R 23169249..23169974 2955..2230 3630 100 Minus
2R 25260384 2R 23192323..23192803 922..442 2405 100 Minus
2R 25260384 2R 23204716..23205156 441..1 2190 99.7 Minus
2R 25260384 2R 23167163..23167569 3659..3253 2035 100 Minus
2R 25260384 2R 23167915..23168217 3255..2953 1515 100 Minus
2R 25260384 2R 23173686..23173932 1511..1265 1235 100 Minus
2R 25260384 2R 23173996..23174204 1266..1058 1045 100 Minus
2R 25260384 2R 23170641..23170849 1944..1736 1045 100 Minus
2R 25260384 2R 23170181..23170334 2229..2076 770 100 Minus
2R 25260384 2R 23170913..23171064 1736..1585 760 100 Minus
2R 25260384 2R 23177350..23177487 1057..920 690 100 Minus
2R 25260384 2R 23170452..23170583 2076..1945 660 100 Minus
2R 25260384 2R 23171783..23171856 1584..1511 370 100 Minus
Blast to na_te.dros performed 2019-03-16 02:20:40
Subject Length Description Subject Range Query Range Score Percent Strand
G7 1192 G7 G7 1192bp 1066..1151 5625..5536 125 63.3 Minus

LP15943.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:21:38 Download gff for LP15943.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 19058941..19059185 1267..1511 99 <- Minus
chr2R 19049472..19051556 3660..5742 98 <- Minus
chr2R 19052422..19052825 3256..3659 99 <- Minus
chr2R 19053174..19053473 2956..3255 100 <- Minus
chr2R 19054509..19055228 2230..2955 99 <- Minus
chr2R 19055435..19055588 2076..2229 100 <- Minus
chr2R 19055707..19055837 1945..2075 100 <- Minus
chr2R 19055895..19056102 1737..1944 100 <- Minus
chr2R 19056167..19056318 1585..1736 100 <- Minus
chr2R 19057037..19057109 1512..1584 100 <- Minus
chr2R 19059251..19059459 1058..1266 99 <- Minus
chr2R 19062606..19062741 922..1057 100 <- Minus
chr2R 19077548..19078027 442..921 99 <- Minus
chr2R 19089910..19090350 1..441 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:12:04 Download gff for LP15943.complete
Subject Subject Range Query Range Percent Splice Strand
CG34371-RA 1..3423 807..4229 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:58:47 Download gff for LP15943.complete
Subject Subject Range Query Range Percent Splice Strand
CG34371-RA 1..3423 807..4229 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:44:27 Download gff for LP15943.complete
Subject Subject Range Query Range Percent Splice Strand
CG34371-RB 1..3525 807..4331 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:06:13 Download gff for LP15943.complete
Subject Subject Range Query Range Percent Splice Strand
CG34371-RB 1..3525 807..4331 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:12:04 Download gff for LP15943.complete
Subject Subject Range Query Range Percent Splice Strand
CG34371-RA 15..5758 1..5742 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:58:47 Download gff for LP15943.complete
Subject Subject Range Query Range Percent Splice Strand
CG34371-RA 15..5758 1..5742 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:44:27 Download gff for LP15943.complete
Subject Subject Range Query Range Percent Splice Strand
CG34371-RA 17..5760 1..5742 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:06:13 Download gff for LP15943.complete
Subject Subject Range Query Range Percent Splice Strand
CG34371-RA 17..5760 1..5742 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:21:38 Download gff for LP15943.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23203517..23203957 1..441 99   Minus
2R 23163012..23165096 3660..5742 99 <- Minus
2R 23165964..23166367 3256..3659 100 <- Minus
2R 23166716..23167015 2956..3255 100 <- Minus
2R 23168050..23168775 2230..2955 100 <- Minus
2R 23168982..23169135 2076..2229 100 <- Minus
2R 23169254..23169384 1945..2075 100 <- Minus
2R 23169442..23169649 1737..1944 100 <- Minus
2R 23169714..23169865 1585..1736 100 <- Minus
2R 23170584..23170656 1512..1584 100 <- Minus
2R 23172487..23172731 1267..1511 100 <- Minus
2R 23172797..23173005 1058..1266 100 <- Minus
2R 23176151..23176286 922..1057 100 <- Minus
2R 23191125..23191604 442..921 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:21:38 Download gff for LP15943.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23203517..23203957 1..441 99   Minus
2R 23163012..23165096 3660..5742 99 <- Minus
2R 23165964..23166367 3256..3659 100 <- Minus
2R 23166716..23167015 2956..3255 100 <- Minus
2R 23168050..23168775 2230..2955 100 <- Minus
2R 23168982..23169135 2076..2229 100 <- Minus
2R 23169254..23169384 1945..2075 100 <- Minus
2R 23169442..23169649 1737..1944 100 <- Minus
2R 23169714..23169865 1585..1736 100 <- Minus
2R 23170584..23170656 1512..1584 100 <- Minus
2R 23172487..23172731 1267..1511 100 <- Minus
2R 23172797..23173005 1058..1266 100 <- Minus
2R 23176151..23176286 922..1057 100 <- Minus
2R 23191125..23191604 442..921 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:21:38 Download gff for LP15943.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23203517..23203957 1..441 99   Minus
2R 23163012..23165096 3660..5742 99 <- Minus
2R 23165964..23166367 3256..3659 100 <- Minus
2R 23166716..23167015 2956..3255 100 <- Minus
2R 23168050..23168775 2230..2955 100 <- Minus
2R 23168982..23169135 2076..2229 100 <- Minus
2R 23169254..23169384 1945..2075 100 <- Minus
2R 23169442..23169649 1737..1944 100 <- Minus
2R 23169714..23169865 1585..1736 100 <- Minus
2R 23170584..23170656 1512..1584 100 <- Minus
2R 23172487..23172731 1267..1511 100 <- Minus
2R 23172797..23173005 1058..1266 100 <- Minus
2R 23176151..23176286 922..1057 100 <- Minus
2R 23191125..23191604 442..921 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:44:27 Download gff for LP15943.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19054239..19054538 2956..3255 100 <- Minus
arm_2R 19050535..19052619 3660..5742 99 <- Minus
arm_2R 19053487..19053890 3256..3659 100 <- Minus
arm_2R 19055573..19056298 2230..2955 100 <- Minus
arm_2R 19056505..19056658 2076..2229 100 <- Minus
arm_2R 19056777..19056907 1945..2075 100 <- Minus
arm_2R 19056965..19057172 1737..1944 100 <- Minus
arm_2R 19057237..19057388 1585..1736 100 <- Minus
arm_2R 19058107..19058179 1512..1584 100 <- Minus
arm_2R 19060010..19060254 1267..1511 100 <- Minus
arm_2R 19060320..19060528 1058..1266 100 <- Minus
arm_2R 19063674..19063809 922..1057 100 <- Minus
arm_2R 19078648..19079127 442..921 100 <- Minus
arm_2R 19091040..19091480 1..441 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:50:29 Download gff for LP15943.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23170931..23171082 1585..1736 100 <- Minus
2R 23171801..23171873 1512..1584 100 <- Minus
2R 23173704..23173948 1267..1511 100 <- Minus
2R 23174014..23174222 1058..1266 100 <- Minus
2R 23177368..23177503 922..1057 100 <- Minus
2R 23164229..23166313 3660..5742 99 <- Minus
2R 23167181..23167584 3256..3659 100 <- Minus
2R 23167933..23168232 2956..3255 100 <- Minus
2R 23169267..23169992 2230..2955 100 <- Minus
2R 23170199..23170352 2076..2229 100 <- Minus
2R 23170471..23170601 1945..2075 100 <- Minus
2R 23170659..23170866 1737..1944 100 <- Minus
2R 23192342..23192821 442..921 100 <- Minus
2R 23204734..23205174 1..441 99   Minus

LP15943.pep Sequence

Translation from 806 to 4228

> LP15943.pep
MDTFSAAVFPRQPVAFVLVLATALSLVQGEQHPATADEGPLSEILTAVGS
EVALPCDLVPGTGIVDKVQLVIWYRQGNVKPIYTFDARGRPLNLGIPWAD
ESVFNKKAHFHHDTDPPALRIKNIQTSDAGLYKCRVDFHKSPTRNWRINV
TVLVPPTALTILDHHGAEIRDQTAGPYLEGDSIDLTCLSSGGVPPPRVSW
WREHALIDDSFQVLPDGSVRNVLRLKNIQRKDLLTMYTCQASNGHVVPAL
TKKVILDMNLPPLSLLLQGLNHAVIAGTRSHVTCTAIGARPPPEIIWSKA
GQIVRGATSSTSSDGNTTISELMLIPVPEDNERQVVCSISLNAGITSQQL
HEGHTTVMTTLGNGHTGLYLKDSRVLNVTHAPIVNLNLGAPLDPDNLLKG
TDVYLECDVKANPAITRVEWYHSDKQLHSSRGIIISNQTLVLQGISKSSH
GQYFCRASNLQGSVSSNEVYLDVKYPPVCKSESTIIRAALKQTINITCEV
DANPVDNLNYKWHFNNSLESLIELPQLGQGAPVMLASGSDQSGYYQRSKR
KHSHGMQQRLLHGRHGRMAAVRFEDEDEDGYGEFEEYGDEVGQPFTQMVY
SNMVHKNHVESSKQQQRKQLSPQQQQQQQQMASGGSSGDSHTPSGGVILE
RKRLVALHKQHHRGGVATPPTTTAAPPLNNVYSYHVESYESFGAISCVAS
SPMGHSAPCWYHIQPADLPEPVKNCTAYNATANSLQIQCIPGYDGGIPQH
FHAQIYDELNRQILYNASYKYSEFTVKRLPSDSVFVIRITAVNAQGASKV
AYRLRGRTLSAPLLRTASSTAVLVQLTPLLGALVGVIATLILVAICVVIV
IKFRSKRGGRRHGSGADATTTEADKGSAEPLSRNMGSHSSLEDKNPDVVP
QEANSEDEFHQEEKAFDRLNMESQRILYTPPTRINTASPPPPSLSPTFGK
QYGELSLTTNPAFSLYNTPQRAPAVQRPVYTAPPPLLSTRTPPNIYTRIP
GRGGGGGGATVTAAGAGGYHLPAYETRTSPTSPYGSTTTCTMPLLGGQSN
GSLQSGGVGGVGGLVGGGACNTLPHPGSLHVGGISAALTSSVTSGNITIG
AAQSLLTSPRSQTATYSTTLGGVQSPLLMGGGGNYETVSS*

LP15943.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:27:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13311-PA 1063 GF13311-PA 1..1063 83..1140 4507 87.3 Plus
Dana\GF12266-PA 1198 GF12266-PA 55..517 41..524 844 38 Plus
Dana\GF17603-PA 1006 GF17603-PA 58..541 18..525 800 35.6 Plus
Dana\GF11518-PA 944 GF11518-PA 24..484 40..521 764 35.6 Plus
Dana\GF15000-PA 890 GF15000-PA 65..521 43..521 756 35.3 Plus
Dana\GF11518-PA 944 GF11518-PA 510..730 692..907 243 27.6 Plus
Dana\GF17603-PA 1006 GF17603-PA 564..736 692..864 205 28.4 Plus
Dana\GF15000-PA 890 GF15000-PA 545..778 690..902 194 27.4 Plus
Dana\GF12266-PA 1198 GF12266-PA 152..669 248..820 189 23.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:27:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20058-PA 1078 GG20058-PA 13..1078 84..1140 5515 97.6 Plus
Dere\GG22033-PA 1201 GG22033-PA 43..522 27..525 829 36.3 Plus
Dere\GG19699-PA 1003 GG19699-PA 77..540 40..525 803 35.8 Plus
Dere\GG24233-PA 852 GG24233-PA 48..504 43..521 757 35.5 Plus
Dere\GG17336-PA 939 GG17336-PA 24..484 40..521 751 35 Plus
Dere\GG17336-PA 939 GG17336-PA 510..737 692..914 246 26.8 Plus
Dere\GG19699-PA 1003 GG19699-PA 563..735 692..864 204 27.8 Plus
Dere\GG24233-PA 852 GG24233-PA 528..761 690..902 203 28.3 Plus
Dere\GG22033-PA 1201 GG22033-PA 156..726 248..872 196 22.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 13:27:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23057-PA 1142 GH23057-PA 12..1142 33..1140 4646 80.3 Plus
Dgri\GH20836-PA 735 GH20836-PA 58..521 41..525 819 35.9 Plus
Dgri\GH19047-PA 1025 GH19047-PA 76..539 40..525 785 35.6 Plus
Dgri\GH14295-PA 1726 GH14295-PA 45..545 6..525 752 34 Plus
Dgri\GH18044-PA 940 GH18044-PA 32..484 48..521 731 34.9 Plus
Dgri\GH19047-PA 1025 GH19047-PA 553..738 683..868 219 28 Plus
Dgri\GH18044-PA 940 GH18044-PA 498..736 680..914 214 24.7 Plus
Dgri\GH20836-PA 735 GH20836-PA 533..672 681..820 180 35 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:16:26
Subject Length Description Subject Range Query Range Score Percent Strand
side-V-PB 1174 CG34371-PB 1..1140 1..1140 5968 100 Plus
side-V-PA 1140 CG34371-PA 1..1140 1..1140 5968 100 Plus
side-VIII-PE 1142 CG12484-PE 46..515 37..525 809 35.6 Plus
side-VIII-PD 1194 CG12484-PD 46..515 37..525 809 35.6 Plus
side-VIII-PA 736 CG12484-PA 64..522 48..525 807 36 Plus
side-VIII-PB 1201 CG12484-PB 64..522 48..525 807 36 Plus
side-IV-PC 1001 CG14372-PC 77..540 40..525 786 35.8 Plus
side-IV-PD 1001 CG14372-PD 77..540 40..525 786 35.8 Plus
side-III-PP 1056 CG34113-PP 31..521 17..527 758 34.8 Plus
side-III-PO 1689 CG34113-PO 31..514 17..519 757 35 Plus
side-VII-PB 939 CG12950-PB 4..484 17..521 752 34.4 Plus
side-VII-PA 939 CG12950-PA 4..484 17..521 752 34.4 Plus
side-VI-PC 760 CG34114-PC 6..494 13..528 741 34.5 Plus
side-VI-PB 1087 CG34114-PB 6..494 13..528 741 34.5 Plus
side-II-PB 1064 CG42313-PB 62..509 49..521 717 35.4 Plus
side-II-PA 1064 CG15277-PA 62..509 49..521 717 35.4 Plus
side-PB 929 CG31062-PB 66..557 14..517 603 30.9 Plus
side-PA 939 CG31062-PA 66..557 14..517 603 30.9 Plus
side-PD 943 CG31062-PD 66..557 14..517 603 30.9 Plus
side-PC 986 CG31062-PC 66..557 14..517 603 30.9 Plus
nrm-PB 1036 CG8779-PB 16..525 5..525 328 25.9 Plus
nrm-PA 1087 CG8779-PA 16..525 5..525 328 25.9 Plus
nrm-PF 1097 CG43079-PF 16..525 5..525 328 25.9 Plus
nrm-PH 1209 CG43079-PH 16..525 5..525 328 25.9 Plus
nrm-PI 1846 CG43079-PI 16..525 5..525 328 25.9 Plus
nrm-PE 2192 CG43079-PE 16..525 5..525 328 25.9 Plus
side-VIII-PE 1142 CG12484-PE 149..711 248..862 273 24.3 Plus
side-VI-PB 1087 CG34114-PB 515..810 692..964 268 29.5 Plus
side-VI-PC 760 CG34114-PC 515..736 692..900 262 31.9 Plus
side-VII-PB 939 CG12950-PB 510..731 692..908 249 27.1 Plus
side-VII-PA 939 CG12950-PA 510..731 692..908 249 27.1 Plus
side-II-PB 1064 CG42313-PB 523..959 680..1135 248 24.1 Plus
side-II-PA 1064 CG15277-PA 523..959 680..1135 248 24.1 Plus
side-VIII-PA 736 CG12484-PA 156..728 248..876 221 23.5 Plus
side-VIII-PD 1194 CG12484-PD 149..717 248..872 217 23.5 Plus
side-VIII-PB 1201 CG12484-PB 156..724 248..872 217 23.5 Plus
sns-PA 1479 CG33141-PA 238..558 114..459 199 25.8 Plus
sns-PC 1492 CG33141-PC 238..558 114..459 199 25.8 Plus
sns-PB 1542 CG33141-PB 238..558 114..459 199 25.8 Plus
ed-PC 1281 CG12676-PC 171..377 282..517 197 27.2 Plus
ed-PB 1332 CG12676-PB 171..377 282..517 197 27.2 Plus
ed-PA 1332 CG12676-PA 171..377 282..517 197 27.2 Plus
fred-PG 1198 CG31774-PG 150..351 282..512 196 26.4 Plus
fred-PF 1323 CG31774-PF 150..351 282..512 196 26.4 Plus
fred-PH 1447 CG31774-PH 150..351 282..512 196 26.4 Plus
Dscam3-PC 2007 CG31190-PC 401..819 118..545 194 23.5 Plus
tutl-PE 902 CG15427-PE 211..573 118..512 192 23.4 Plus
tutl-PC 903 CG15427-PC 211..573 118..512 192 23.4 Plus
tutl-PI 963 CG15427-PI 211..573 118..512 192 23.4 Plus
tutl-PF 963 CG15427-PF 211..573 118..512 192 23.4 Plus
tutl-PK 991 CG15427-PK 211..573 118..512 192 23.4 Plus
tutl-PG 1508 CG15427-PG 211..573 118..512 192 23.4 Plus
tutl-PD 1508 CG15427-PD 211..573 118..512 192 23.4 Plus
tutl-PJ 1536 CG15427-PJ 211..573 118..512 192 23.4 Plus
side-IV-PC 1001 CG14372-PC 563..726 692..854 191 27.7 Plus
side-IV-PD 1001 CG14372-PD 563..726 692..854 191 27.7 Plus
tutl-PH 1533 CG15427-PH 211..598 118..512 179 22.9 Plus
Ama-PC 333 CG2198-PC 103..327 120..357 177 26.6 Plus
Ama-PA 333 CG2198-PA 103..327 120..357 177 26.6 Plus
Ama-PB 341 CG2198-PB 111..335 120..357 177 26.6 Plus
hbs-PA 1228 CG7449-PA 240..524 147..459 162 21.8 Plus
hbs-PC 1235 CG7449-PC 240..524 147..459 162 21.8 Plus
hbs-PB 1235 CG7449-PB 240..524 147..459 162 21.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:27:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21128-PA 1171 GI21128-PA 35..1171 13..1140 4764 81.6 Plus
Dmoj\GI20939-PA 740 GI20939-PA 58..521 41..525 829 35.9 Plus
Dmoj\GI24340-PA 1040 GI24340-PA 90..553 40..525 771 34.6 Plus
Dmoj\GI23966-PA 940 GI23966-PA 25..484 41..521 752 35.1 Plus
Dmoj\GI17336-PA 870 GI17336-PA 56..512 43..521 747 35.5 Plus
Dmoj\GI23966-PA 940 GI23966-PA 499..798 681..983 216 24.5 Plus
Dmoj\GI24340-PA 1040 GI24340-PA 576..752 692..868 213 28.9 Plus
Dmoj\GI20939-PA 740 GI20939-PA 155..672 248..820 200 24.5 Plus
Dmoj\GI17336-PA 870 GI17336-PA 536..769 690..902 197 27.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:27:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11291-PA 1126 GL11291-PA 10..1126 40..1140 4696 86.1 Plus
Dper\GL17662-PA 741 GL17662-PA 45..524 27..525 831 36.1 Plus
Dper\GL23537-PA 946 GL23537-PA 81..544 40..525 799 35.6 Plus
Dper\GL12551-PA 1114 GL12551-PA 4..493 15..528 749 35 Plus
Dper\GL21886-PA 935 GL21886-PA 24..484 40..521 744 35.4 Plus
Dper\GL12551-PA 1114 GL12551-PA 514..735 692..900 270 31.9 Plus
Dper\GL21886-PA 935 GL21886-PA 510..731 692..908 236 26.5 Plus
Dper\GL17662-PA 741 GL17662-PA 148..729 237..879 205 23.7 Plus
Dper\GL23537-PA 946 GL23537-PA 567..730 692..854 200 27.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:27:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24669-PA 1180 GA24669-PA 38..1180 24..1140 4696 84.3 Plus
Dpse\GA17246-PB 1223 GA17246-PB 45..524 27..525 836 36.1 Plus
Dpse\GA17246-PC 1039 GA17246-PC 45..524 27..525 834 36.1 Plus
Dpse\GA17246-PA 741 GA17246-PA 45..524 27..525 831 36.1 Plus
Dpse\GA12940-PA 1002 GA12940-PA 81..544 40..525 798 35.6 Plus
Dpse\GA17246-PB 1223 GA17246-PB 158..732 248..882 213 23.8 Plus
Dpse\GA17246-PC 1039 GA17246-PC 158..732 248..882 212 23.9 Plus
Dpse\GA17246-PA 741 GA17246-PA 148..729 237..879 205 23.7 Plus
Dpse\GA12940-PA 1002 GA12940-PA 567..730 692..854 200 27.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:27:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22015-PA 775 GM22015-PA 43..522 27..525 823 35.9 Plus
Dsec\GM24110-PA 1001 GM24110-PA 77..540 40..525 802 35.8 Plus
Dsec\GM26222-PA 939 GM26222-PA 24..484 40..521 755 35.2 Plus
Dsec\GM23914-PA 1084 GM23914-PA 6..494 13..528 755 35.2 Plus
Dsec\GM14610-PA 1263 GM14610-PA 465..921 43..521 750 35.5 Plus
Dsec\GM23914-PA 1084 GM23914-PA 515..736 692..900 270 31.9 Plus
Dsec\GM26222-PA 939 GM26222-PA 510..731 692..908 241 27.1 Plus
Dsec\GM24110-PA 1001 GM24110-PA 563..735 692..864 201 27.8 Plus
Dsec\GM14610-PA 1263 GM14610-PA 945..1178 690..902 200 28.3 Plus
Dsec\GM22015-PA 775 GM22015-PA 146..610 237..756 194 23.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:27:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25075-PA 1068 GD25075-PA 14..1068 85..1140 5558 98.7 Plus
Dsim\GD11514-PA 774 GD11514-PA 43..521 27..525 828 36 Plus
Dsim\GD18910-PA 1044 GD18910-PA 77..540 40..525 803 35.8 Plus
Dsim\GD20766-PA 939 GD20766-PA 24..484 40..521 755 35.2 Plus
Dsim\GD18079-PA 939 GD18079-PA 66..557 14..517 620 30.9 Plus
Dsim\GD20766-PA 939 GD20766-PA 510..731 692..908 242 27.1 Plus
Dsim\GD18910-PA 1044 GD18910-PA 563..735 692..864 203 27.8 Plus
Dsim\GD11514-PA 774 GD11514-PA 146..609 237..756 187 23.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:27:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20976-PA 1163 GJ20976-PA 23..1163 13..1140 4732 81.7 Plus
Dvir\GJ20663-PA 734 GJ20663-PA 58..521 41..525 842 36.1 Plus
Dvir\GJ10426-PA 1026 GJ10426-PA 90..553 40..525 780 35.2 Plus
Dvir\GJ16040-PA 832 GJ16040-PA 35..491 43..521 750 35.3 Plus
Dvir\GJ11152-PA 910 GJ11152-PA 44..463 44..521 593 30.7 Plus
Dvir\GJ11152-PA 910 GJ11152-PA 489..716 692..918 226 28.5 Plus
Dvir\GJ10426-PA 1026 GJ10426-PA 567..752 683..868 207 27.5 Plus
Dvir\GJ20663-PA 734 GJ20663-PA 155..672 248..820 198 24.2 Plus
Dvir\GJ16040-PA 832 GJ16040-PA 515..748 690..902 187 27 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:27:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19588-PA 1172 GK19588-PA 19..1172 17..1140 4647 81.6 Plus
Dwil\GK20624-PA 1097 GK20624-PA 70..533 41..525 823 35.5 Plus
Dwil\GK13944-PA 1040 GK13944-PA 103..566 40..525 781 34.8 Plus
Dwil\GK18073-PA 859 GK18073-PA 59..515 43..521 760 36.3 Plus
Dwil\GK13915-PA 936 GK13915-PA 24..484 40..521 759 36.4 Plus
Dwil\GK13915-PA 936 GK13915-PA 510..732 692..909 233 27 Plus
Dwil\GK18073-PA 859 GK18073-PA 539..772 690..902 205 28.7 Plus
Dwil\GK20624-PA 1097 GK20624-PA 167..681 248..817 194 23.6 Plus
Dwil\GK13944-PA 1040 GK13944-PA 589..765 692..868 189 27.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:27:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11597-PA 1087 GE11597-PA 17..1087 84..1140 5417 95.9 Plus
Dyak\GE26275-PA 1004 GE26275-PA 78..541 40..525 802 35.8 Plus
Dyak\GE12111-PA 539 GE12111-PA 43..504 27..506 795 36.3 Plus
Dyak\GE24130-PA 1671 GE24130-PA 19..479 44..525 765 35.2 Plus
Dyak\GE24765-PA 851 GE24765-PA 54..504 49..521 757 35.8 Plus
Dyak\GE26275-PA 1004 GE26275-PA 564..736 692..864 203 27.8 Plus
Dyak\GE24765-PA 851 GE24765-PA 528..761 690..902 203 28.3 Plus

LP15943.hyp Sequence

Translation from 806 to 4228

> LP15943.hyp
MDTFSAAVFPRQPVAFVLVLATALSLVQGEQHPATADEGPLSEILTAVGS
EVALPCDLVPGTGIVDKVQLVIWYRQGNVKPIYTFDARGRPLNLGIPWAD
ESVFNKKAHFHHDTDPPALRIKNIQTSDAGLYKCRVDFHKSPTRNWRINV
TVLVPPTALTILDHHGAEIRDQTAGPYLEGDSIDLTCLSSGGVPPPRVSW
WREHALIDDSFQVLPDGSVRNVLRLKNIQRKDLLTMYTCQASNGHVVPAL
TKKVILDMNLPPLSLLLQGLNHAVIAGTRSHVTCTAIGARPPPEIIWSKA
GQIVRGATSSTSSDGNTTISELMLIPVPEDNERQVVCSISLNAGITSQQL
HEGHTTVMTTLGNGHTGLYLKDSRVLNVTHAPIVNLNLGAPLDPDNLLKG
TDVYLECDVKANPAITRVEWYHSDKQLHSSRGIIISNQTLVLQGISKSSH
GQYFCRASNLQGSVSSNEVYLDVKYPPVCKSESTIIRAALKQTINITCEV
DANPVDNLNYKWHFNNSLESLIELPQLGQGAPVMLASGSDQSGYYQRSKR
KHSHGMQQRLLHGRHGRMAAVRFEDEDEDGYGEFEEYGDEVGQPFTQMVY
SNMVHKNHVESSKQQQRKQLSPQQQQQQQQMASGGSSGDSHTPSGGVILE
RKRLVALHKQHHRGGVATPPTTTAAPPLNNVYSYHVESYESFGAISCVAS
SPMGHSAPCWYHIQPADLPEPVKNCTAYNATANSLQIQCIPGYDGGIPQH
FHAQIYDELNRQILYNASYKYSEFTVKRLPSDSVFVIRITAVNAQGASKV
AYRLRGRTLSAPLLRTASSTAVLVQLTPLLGALVGVIATLILVAICVVIV
IKFRSKRGGRRHGSGADATTTEADKGSAEPLSRNMGSHSSLEDKNPDVVP
QEANSEDEFHQEEKAFDRLNMESQRILYTPPTRINTASPPPPSLSPTFGK
QYGELSLTTNPAFSLYNTPQRAPAVQRPVYTAPPPLLSTRTPPNIYTRIP
GRGGGGGGATVTAAGAGGYHLPAYETRTSPTSPYGSTTTCTMPLLGGQSN
GSLQSGGVGGVGGLVGGGACNTLPHPGSLHVGGISAALTSSVTSGNITIG
AAQSLLTSPRSQTATYSTTLGGVQSPLLMGGGGNYETVSS*

LP15943.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:43:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG34371-PB 1174 CG34371-PB 1..1140 1..1140 5968 100 Plus
CG34371-PA 1140 CG34371-PA 1..1140 1..1140 5968 100 Plus
CG12484-PA 736 CG12484-PA 64..522 48..525 807 36 Plus
CG14372-PC 1001 CG14372-PC 77..540 40..525 786 35.8 Plus
CG14372-PD 1001 CG14372-PD 77..540 40..525 786 35.8 Plus
CG12484-PA 736 CG12484-PA 156..728 248..876 221 23.5 Plus
CG14372-PC 1001 CG14372-PC 563..726 692..854 191 27.7 Plus