BDGP Sequence Production Resources |
Search the DGRC for LP15968
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 159 |
Well: | 68 |
Vector: | pOT2 |
Associated Gene/Transcript | svr-RF |
Protein status: | LP15968.pep: gold |
Sequenced Size: | 1797 |
Gene | Date | Evidence |
---|---|---|
svr-RB | 2009-06-22 | Replacement based on scoring |
1797 bp assembled on 2009-10-13
GenBank Submission: BT100053.1
> LP15968.complete GCAACGACGACCCACGACGAACGGAGGCCCGACGGACATATAAGAAGAGA GCGAGTTGTGTGCGGGAGAGAGCTGAGAAGAAGCGGAGGAAAAATAACTG TTTCTCGCTCAATTCGCACGCCAGTGATAAAAACAACATAATCTCGACAA GATTGCAAATCGCAAGATGCCAACTCTGGGTCTCCTGTTCGCCTCCATCG GCATTGCCGTGCTGGCGATGGGTGTGCCGCATTGCAGGGGCTACACCATC AAGGAGGACGAATCCTTCCTGCAGCAACCGCACTATGCTAGCCAAGAGCA GCTGGAGGACCTGTTTGCTGGCCTGGAGAAGGCGTACCCCAATCAGGCCA AAGTCCACTTCCTTGGTCGATCTCTAGAAGGACGAAATCTGCTCGCCCTG CAAATCTCGCGGAACACCCGGTCGCGGAATCTCCTTACACCTCCAGTAAA GTACATAGCCAATATGCATGGAGACGAAACGGTGGGCAGGCAGCTCCTTG TTTATATGGCACAATATCTGCTCGGTAATCACGAAAGAATCAGCGACCTG GGCCAGCTGGTCAACAGCACCGATATCTACTTGGTGCCCACGATGAATCC AGATGGCTATGCGTTGTCCCAGGAAGGCAACTGCGAGTCGCTGCCCAACT ATGTGGGTCGTGGCAATGCGGCCAACATCGATTTGAATCGCGATTTCCCC GATCGCCTGGAGCAGAGCCATGTCCACCAGTTGCGCGCCCAGTCTCGTCA GCCGGAAACAGCAGCCCTGGTAAATTGGATCGTTAGCAAACCGTTTGTGC TCTCCGCCAATTTCCATGGCGGAGCTGTTGTGGCCAGCTATCCCTATGAC AACTCCTTGGCTCACAATGAGTGCTGCGAGGAGAGTTTGACTCCGGATGA TCGGGTCTTCAAGCAGCTGGCCCACACCTATTCTGACAACCATCCGATTA TGAGAAAGGGCAACAATTGCAACGATAGCTTCTCGGGAGGTATCACCAAC GGAGCCCACTGGTATGAGTTGTCCGGTGGAATGCAGGACTTTAACTATGC GTTTAGCAACTGTTTCGAGCTGACCATCGAGTTGTCGTGCTGCAAGTATC CGGCAGCAAGCACTTTGCCCCAGGAATGGCAGCGGAACAAGGCATCCCTG CTGCAGCTGCTGCGCCAGGCACATATCGGCATCAAGGGCCTGGTGACCGA TGCCAGTGGCTTTCCAATAGCCGATGCCAATGTCTACGTGGCTGGACTAG AGGAGAAACCCATGCGCACTTCCAAACGTGGCGAATACTGGAGGCTTTTG ACCCCGGGACTCTATAGCGTGCACGCCTCCGCTTTTGGTTACCAGACCAG TGCCCCGCAACAGGTCCGGGTGACCAACGATAACCAGGAGGCCTTGCGCC TGGACTTTAAGCTTGCGCCCGTCGAGACGAACTTTGATGGTATTAGCAGT TTTTACAGTCCCTATTATTTCTAGAGAGGGATGCAACGGAAATACCTATA TATATGCGCATATATATTATATTGGGCAGTTCCAAAATGCTATACATATA TCCACATTTAGCGATGCATAGTATTCTCTGCTCTCCTGCCCTCTCCGCAC TATCCTTGTACTATATATGTTATCTCCGCCATTCCCGAATCCAGATATAC AACCATTTTGCATGTTCATTTGCTCCCTCTCATTTAGAACCTTTATTTGT TTACCGCGAGAGCTAGCAGAAAATAAACAATGTTGGCTGTCGTGTGGATG AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
svr-RF | 3143 | svr-RF | 309..2060 | 1..1752 | 8760 | 100 | Plus |
svr-RG | 5836 | svr-RG | 309..1748 | 1..1440 | 7200 | 100 | Plus |
svr.i | 3098 | svr.i | 309..1319 | 1..1011 | 5055 | 100 | Plus |
svr.i | 3098 | svr.i | 1319..2015 | 1056..1752 | 3485 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 394022..394644 | 1..623 | 3115 | 100 | Plus |
chrX | 22417052 | chrX | 396322..396801 | 859..1338 | 2400 | 100 | Plus |
chrX | 22417052 | chrX | 396870..397282 | 1338..1750 | 2065 | 100 | Plus |
chrX | 22417052 | chrX | 396017..396256 | 620..859 | 1200 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 499987..500609 | 1..623 | 3115 | 100 | Plus |
X | 23542271 | X | 502287..502766 | 859..1338 | 2400 | 100 | Plus |
X | 23542271 | X | 502835..503249 | 1338..1752 | 2075 | 100 | Plus |
X | 23542271 | X | 501982..502221 | 620..859 | 1200 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 508085..508707 | 1..623 | 3115 | 100 | Plus |
X | 23527363 | X | 510385..510864 | 859..1338 | 2400 | 100 | Plus |
X | 23527363 | X | 510933..511347 | 1338..1752 | 2075 | 100 | Plus |
X | 23527363 | X | 510080..510319 | 620..859 | 1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 394022..394643 | 1..622 | 100 | -> | Plus |
chrX | 396020..396255 | 623..858 | 100 | -> | Plus |
chrX | 396322..396801 | 859..1338 | 100 | -> | Plus |
chrX | 396871..397282 | 1339..1750 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
svr-RF | 1..1308 | 167..1474 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
svr-RF | 1..1308 | 167..1474 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
svr-RF | 1..1308 | 167..1474 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
svr-RF | 1..1308 | 167..1474 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
svr-RF | 309..2058 | 1..1750 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
svr-RF | 309..2058 | 1..1750 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
svr-RF | 309..2058 | 1..1750 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
svr-RF | 309..2058 | 1..1750 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 499987..500608 | 1..622 | 100 | -> | Plus |
X | 501985..502220 | 623..858 | 100 | -> | Plus |
X | 502287..502766 | 859..1338 | 100 | -> | Plus |
X | 502836..503247 | 1339..1750 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 499987..500608 | 1..622 | 100 | -> | Plus |
X | 501985..502220 | 623..858 | 100 | -> | Plus |
X | 502287..502766 | 859..1338 | 100 | -> | Plus |
X | 502836..503247 | 1339..1750 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 499987..500608 | 1..622 | 100 | -> | Plus |
X | 501985..502220 | 623..858 | 100 | -> | Plus |
X | 502287..502766 | 859..1338 | 100 | -> | Plus |
X | 502836..503247 | 1339..1750 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 394020..394641 | 1..622 | 100 | -> | Plus |
arm_X | 396018..396253 | 623..858 | 100 | -> | Plus |
arm_X | 396320..396799 | 859..1338 | 100 | -> | Plus |
arm_X | 396869..397280 | 1339..1750 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 508085..508706 | 1..622 | 100 | -> | Plus |
X | 510083..510318 | 623..858 | 100 | -> | Plus |
X | 510385..510864 | 859..1338 | 100 | -> | Plus |
X | 510934..511345 | 1339..1750 | 100 | Plus |
Translation from 166 to 1473
> LP15968.hyp MPTLGLLFASIGIAVLAMGVPHCRGYTIKEDESFLQQPHYASQEQLEDLF AGLEKAYPNQAKVHFLGRSLEGRNLLALQISRNTRSRNLLTPPVKYIANM HGDETVGRQLLVYMAQYLLGNHERISDLGQLVNSTDIYLVPTMNPDGYAL SQEGNCESLPNYVGRGNAANIDLNRDFPDRLEQSHVHQLRAQSRQPETAA LVNWIVSKPFVLSANFHGGAVVASYPYDNSLAHNECCEESLTPDDRVFKQ LAHTYSDNHPIMRKGNNCNDSFSGGITNGAHWYELSGGMQDFNYAFSNCF ELTIELSCCKYPAASTLPQEWQRNKASLLQLLRQAHIGIKGLVTDASGFP IADANVYVAGLEEKPMRTSKRGEYWRLLTPGLYSVHASAFGYQTSAPQQV RVTNDNQEALRLDFKLAPVETNFDGISSFYSPYYF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
svr-PL | 435 | CG4122-PL | 1..435 | 1..435 | 2305 | 100 | Plus |
svr-PF | 435 | CG4122-PF | 1..435 | 1..435 | 2305 | 100 | Plus |
svr-PN | 1439 | CG4122-PN | 1..425 | 1..425 | 2249 | 100 | Plus |
svr-PM | 1406 | CG4122-PM | 1..425 | 1..425 | 2249 | 100 | Plus |
svr-PG | 1439 | CG4122-PG | 1..425 | 1..425 | 2249 | 100 | Plus |
svr-PN | 1439 | CG4122-PN | 443..841 | 29..418 | 672 | 37.3 | Plus |
svr-PM | 1406 | CG4122-PM | 443..841 | 29..418 | 672 | 37.3 | Plus |
Translation from 166 to 1473
> LP15968.pep MPTLGLLFASIGIAVLAMGVPHCRGYTIKEDESFLQQPHYASQEQLEDLF AGLEKAYPNQAKVHFLGRSLEGRNLLALQISRNTRSRNLLTPPVKYIANM HGDETVGRQLLVYMAQYLLGNHERISDLGQLVNSTDIYLVPTMNPDGYAL SQEGNCESLPNYVGRGNAANIDLNRDFPDRLEQSHVHQLRAQSRQPETAA LVNWIVSKPFVLSANFHGGAVVASYPYDNSLAHNECCEESLTPDDRVFKQ LAHTYSDNHPIMRKGNNCNDSFSGGITNGAHWYELSGGMQDFNYAFSNCF ELTIELSCCKYPAASTLPQEWQRNKASLLQLLRQAHIGIKGLVTDASGFP IADANVYVAGLEEKPMRTSKRGEYWRLLTPGLYSVHASAFGYQTSAPQQV RVTNDNQEALRLDFKLAPVETNFDGISSFYSPYYF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21938-PA | 1607 | GF21938-PA | 177..590 | 12..425 | 1898 | 82.9 | Plus |
Dana\GF22654-PA | 488 | GF22654-PA | 75..446 | 40..418 | 793 | 41 | Plus |
Dana\GF21938-PA | 1607 | GF21938-PA | 627..1004 | 46..416 | 684 | 37.8 | Plus |
Dana\GF21938-PA | 1607 | GF21938-PA | 33..162 | 27..152 | 272 | 40.8 | Plus |
Dana\GF10640-PA | 440 | GF10640-PA | 145..407 | 39..306 | 187 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12791-PA | 1589 | GG12791-PA | 151..575 | 1..425 | 2242 | 97.2 | Plus |
Dere\GG19068-PA | 517 | GG19068-PA | 76..447 | 40..418 | 791 | 40.8 | Plus |
Dere\GG12791-PA | 1589 | GG12791-PA | 612..991 | 46..418 | 666 | 38.1 | Plus |
Dere\GG12791-PA | 1589 | GG12791-PA | 22..150 | 27..152 | 273 | 41.9 | Plus |
Dere\GG14422-PA | 440 | GG14422-PA | 145..395 | 39..295 | 190 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24780-PA | 1441 | GH24780-PA | 22..422 | 25..425 | 1865 | 83.5 | Plus |
Dgri\GH12395-PA | 510 | GH12395-PA | 60..467 | 16..434 | 797 | 38.7 | Plus |
Dgri\GH24780-PA | 1441 | GH24780-PA | 438..820 | 28..402 | 700 | 39.5 | Plus |
Dgri\GH24779-PA | 182 | GH24779-PA | 41..181 | 27..152 | 265 | 36.9 | Plus |
Dgri\GH14880-PA | 437 | GH14880-PA | 140..413 | 34..315 | 185 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
svr-PL | 435 | CG4122-PL | 1..435 | 1..435 | 2305 | 100 | Plus |
svr-PF | 435 | CG4122-PF | 1..435 | 1..435 | 2305 | 100 | Plus |
svr-PN | 1439 | CG4122-PN | 1..425 | 1..425 | 2249 | 100 | Plus |
svr-PM | 1406 | CG4122-PM | 1..425 | 1..425 | 2249 | 100 | Plus |
svr-PG | 1439 | CG4122-PG | 1..425 | 1..425 | 2249 | 100 | Plus |
svr-PB | 1406 | CG4122-PB | 1..425 | 1..425 | 2249 | 100 | Plus |
svr-PJ | 433 | CG4122-PJ | 23..433 | 28..435 | 1808 | 82.2 | Plus |
svr-PE | 433 | CG4122-PE | 23..433 | 28..435 | 1808 | 82.2 | Plus |
svr-PH | 1437 | CG4122-PH | 23..423 | 28..425 | 1752 | 81.8 | Plus |
svr-PD | 1404 | CG4122-PD | 23..423 | 28..425 | 1752 | 81.8 | Plus |
svr-PI | 1292 | CG4122-PI | 6..278 | 153..425 | 1466 | 100 | Plus |
CG4678-PL | 474 | CG4678-PL | 72..443 | 40..418 | 771 | 40.8 | Plus |
CG4678-PI | 513 | CG4678-PI | 72..443 | 40..418 | 771 | 40.8 | Plus |
CG4678-PF | 479 | CG4678-PF | 72..448 | 40..418 | 762 | 40 | Plus |
CG4678-PD | 518 | CG4678-PD | 72..448 | 40..418 | 762 | 40 | Plus |
CG4678-PJ | 523 | CG4678-PJ | 72..453 | 40..418 | 761 | 39.7 | Plus |
CG4678-PG | 488 | CG4678-PG | 72..457 | 40..418 | 754 | 39.1 | Plus |
CG4678-PE | 527 | CG4678-PE | 72..457 | 40..418 | 754 | 39.1 | Plus |
CG4678-PK | 404 | CG4678-PK | 15..334 | 92..418 | 714 | 43.5 | Plus |
svr-PN | 1439 | CG4122-PN | 443..841 | 29..418 | 672 | 37.3 | Plus |
svr-PM | 1406 | CG4122-PM | 443..841 | 29..418 | 672 | 37.3 | Plus |
svr-PG | 1439 | CG4122-PG | 443..841 | 29..418 | 672 | 37.3 | Plus |
svr-PB | 1406 | CG4122-PB | 443..841 | 29..418 | 672 | 37.3 | Plus |
svr-PH | 1437 | CG4122-PH | 441..839 | 29..418 | 672 | 37.3 | Plus |
svr-PD | 1404 | CG4122-PD | 441..839 | 29..418 | 672 | 37.3 | Plus |
svr-PI | 1292 | CG4122-PI | 296..694 | 29..418 | 672 | 37.3 | Plus |
CG8563-PB | 440 | CG8563-PB | 145..394 | 39..294 | 203 | 27.4 | Plus |
CG8563-PA | 440 | CG8563-PA | 145..394 | 39..294 | 203 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15159-PA | 1454 | GI15159-PA | 28..429 | 27..425 | 1595 | 70.1 | Plus |
Dmoj\GI14727-PA | 437 | GI14727-PA | 56..425 | 40..416 | 793 | 41.3 | Plus |
Dmoj\GI15159-PA | 1454 | GI15159-PA | 466..843 | 46..416 | 698 | 39.3 | Plus |
Dmoj\GI12853-PA | 445 | GI12853-PA | 136..400 | 21..295 | 186 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20387-PA | 1455 | GL20387-PA | 6..424 | 7..425 | 2008 | 86.2 | Plus |
Dper\GL26857-PA | 537 | GL26857-PA | 54..462 | 19..416 | 731 | 37.1 | Plus |
Dper\GL20387-PA | 1455 | GL20387-PA | 461..840 | 46..418 | 680 | 40.1 | Plus |
Dper\GL20386-PA | 164 | GL20386-PA | 33..161 | 27..152 | 301 | 45.7 | Plus |
Dper\GL26374-PA | 438 | GL26374-PA | 143..393 | 39..295 | 205 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA29134-PA | 1455 | GA29134-PA | 6..424 | 7..425 | 2015 | 86.6 | Plus |
Dpse\GA18350-PA | 514 | GA18350-PA | 54..441 | 19..416 | 781 | 39.5 | Plus |
Dpse\GA29134-PA | 1455 | GA29134-PA | 461..840 | 46..418 | 679 | 40.1 | Plus |
Dpse\GA29125-PA | 164 | GA29125-PA | 33..161 | 27..152 | 300 | 45.7 | Plus |
Dpse\GA21166-PA | 438 | GA21166-PA | 143..393 | 39..295 | 205 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19071-PA | 1371 | GM19071-PA | 7..357 | 76..425 | 1652 | 86.6 | Plus |
Dsec\GM19071-PA | 1371 | GM19071-PA | 394..773 | 46..418 | 678 | 38.9 | Plus |
Dsec\GM13459-PA | 449 | GM13459-PA | 72..253 | 40..230 | 390 | 39.8 | Plus |
Dsec\GM14839-PA | 440 | GM14839-PA | 145..395 | 39..295 | 201 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16509-PA | 1439 | GD16509-PA | 1..425 | 1..425 | 2276 | 98.6 | Plus |
Dsim\GD16509-PA | 1439 | GD16509-PA | 462..841 | 46..418 | 676 | 38.9 | Plus |
Dsim\GD17299-PA | 258 | GD17299-PA | 72..253 | 40..230 | 389 | 39.8 | Plus |
Dsim\GD24843-PA | 187 | GD24843-PA | 1..156 | 262..418 | 350 | 41.9 | Plus |
Dsim\GD14012-PA | 440 | GD14012-PA | 145..395 | 39..295 | 201 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14862-PA | 1437 | GJ14862-PA | 5..417 | 13..425 | 1879 | 83.1 | Plus |
Dvir\GJ19439-PA | 517 | GJ19439-PA | 34..424 | 16..416 | 795 | 40 | Plus |
Dvir\GJ14862-PA | 1437 | GJ14862-PA | 450..831 | 39..416 | 688 | 40.4 | Plus |
Dvir\GJ14861-PA | 164 | GJ14861-PA | 29..162 | 22..152 | 266 | 36.6 | Plus |
Dvir\GJ12997-PA | 437 | GJ12997-PA | 142..392 | 39..295 | 198 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16509-PA | 1452 | GK16509-PA | 33..429 | 29..425 | 1837 | 82.4 | Plus |
Dwil\GK25411-PA | 474 | GK25411-PA | 66..437 | 40..418 | 796 | 41.3 | Plus |
Dwil\GK16509-PA | 1452 | GK16509-PA | 466..843 | 46..416 | 670 | 38 | Plus |
Dwil\GK16508-PA | 215 | GK16508-PA | 46..176 | 27..152 | 274 | 39.7 | Plus |
Dwil\GK17379-PA | 448 | GK17379-PA | 153..403 | 39..295 | 209 | 28 | Plus |
Dwil\GK25782-PA | 446 | GK25782-PA | 150..346 | 39..227 | 155 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16618-PA | 1439 | GE16618-PA | 1..425 | 1..425 | 2238 | 96.5 | Plus |
Dyak\GE17613-PA | 513 | GE17613-PA | 74..445 | 40..418 | 790 | 40.8 | Plus |
Dyak\GE16618-PA | 1439 | GE16618-PA | 462..841 | 46..418 | 667 | 38.6 | Plus |
Dyak\GE16617-PA | 153 | GE16617-PA | 23..151 | 27..152 | 280 | 42.6 | Plus |
Dyak\GE21613-PA | 440 | GE21613-PA | 145..395 | 39..295 | 202 | 27.7 | Plus |