Clone LP16165 Report

Search the DGRC for LP16165

Clone and Library Details

Library:LP
Tissue Source:Drosophila melanogaster larval-early pupal
Created by:Ling Hong
Date Registered:1998-06-11
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:161
Well:65
Vector:pOT2
Associated Gene/Transcriptdl-RC
Protein status:LP16165.pep: gold
Sequenced Size:6258

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
dl 2009-02-20 Manual selection by Sue Celniker

Clone Sequence Records

LP16165.complete Sequence

6258 bp assembled on 2009-08-20

GenBank Submission: BT099643.1

> LP16165.complete
TCGGCACGAGCTCAAGACGTTTTCCGCGTGTGTTTGATCGGTTCTACAAG
AACATTTCTCTCGGTAGCACCTATAGATACGAATATATACATAGGTGCTC
AGTTTAAAAACCAAAGCTACCATCTACAATAAAAAACGGATCATATAGTT
ATAAACTATAAATTATAAACAACTCGTAAATTAATCAACTTGTGTTGTCA
ACATTAGAATTAATAAATAATAAAACTTAGTTAATATCCGAAAATTTGCG
ATCTTATCTGTGTGGTGAAGTTTTTACCATCAAAGTTTGGCCGTGATAAC
TGAAAGATAATATTTTGGCCACGTAATGTTTCCGAACCAGAACAATGGAG
CCGCTCCTGGGCAGGGTCCAGCAGTTGATGGCCAACAGAGCCTCAACTAC
AACGGCCTGCCCGCCCAGCAGCAGCAGCAATTGGCACAGTCCACGAAAAA
TGTGCGAAAGAAGCCCTACGTAAAGATCACCGAACAACCGGCAGGAAAGG
CGCTAAGGTTTCGCTACGAGTGCGAGGGACGCTCGGCGGGATCCATTCCG
GGCGTGAACTCTACGCCGGAGAACAAGACCTATCCGACAATCGAAATTGT
GGGCTACAAGGGACGCGCCGTAGTTGTTGTCTCCTGCGTCACAAAGGATA
CGCCATATCGTCCTCATCCCCACAATTTAGTTGGCAAGGAGGGCTGCAAG
AAGGGCGTCTGTACACTGGAGATCAACAGTGAGACAATGCGAGCGGTGTT
CAGTAACTTGGGTATCCAGTGTGTCAAAAAGAAGGACATTGAGGCGGCGC
TCAAGGCGCGCGAGGAGATCCGTGTGGATCCGTTTAAGACTGGCTTTTCG
CATCGTTTCCAGCCCTCGAGCATAGATCTGAATTCGGTGCGATTGTGCTT
TCAAGTATTCATGGAGAGCGAGCAGAAGGGTCGATTCACCTCGCCACTGC
CGCCGGTAGTTTCGGAGCCCATCTTCGATAAGAAGGCCATGTCCGACCTG
GTCATCTGCCGGCTGTGTAGCTGCTCGGCCACCGTTTTCGGCAACACCCA
GATCATCCTGCTCTGCGAGAAGGTGGCCAAGGAGGACATCTCCGTGCGAT
TCTTTGAGGAGAAGAATGGCCAGAGTGTTTGGGAGGCCTTTGGTGACTTC
CAGCACACGGATGTCCACAAGCAGACTGCCATTACCTTTAAGACGCCGCG
CTATCATACCCTGGACATCACAGAGCCCGCCAAGGTTTTTATTCAACTGC
GACGTCCCTCGGATGGAGTTACCAGCGAGGCCCTGCCCTTCGAGTACGTG
CCAATGGACTCAGGTAAACATACATTCTGGAATCTTCATCGGCACCTCAA
GCGGAAGCCGGACGAAGATCTCTTTCAGCAGATCCTCAGGTTGGACGCCA
AACGGGAAGTGCAGCCGCCAACGATTGAGGTTATCGATTTGGATACACCG
AAAATAGATGTGCAACGTGAGATACCTTCGGAAATGGAATTTAATCATGA
GGAATCTCAGCAATCAGAGCCAGCTCTTGAGCAAGAGCAGTCAGTGCAAC
AGGAGCAATATACTCAAGAGCAATCATTGCAACAAGAGCAATATACACAA
GAGCAATCATTACAGCAGGAACAATATTTACAACAACTAGAACAGCAGCA
ATCTTTTCAGCTCGAAGAACCGATGCAACAGGATCAGGAACTACCAGCGC
AGCAATCGTTCGATCAGGCTATAGATCACTTGCCCGATCACACCTCAGAT
CATATTCCCGAGGACATGGAGGCGGCGGATGCCCATGCAGAAGCCGAGGC
CCATCGCCTGCGATCCGAGCAGGAAAAAGAGATTGACACCATTATCGATG
AAAAGGTACGAGAACTGGAGCAACTGGATTTGGGTCAGCAGTTGGAGCCA
CGTCCTTTGACGGCCAACGATAAGATCACCGAGTGGATGAAGTCCAGTGA
GATTGAACAGCAAGTCCATGAGCCCAGTCCCACTGCTGAGGCAGATGTTT
TGGACTCCGCCCTTGAGATATCCAAGGCAGATAAGACCCTTGACGAACTC
CTTGAGACCGTGGCCGAACTGGATGAGATATACACGGACTTCAAAGTTCA
GAGGGATACGTACAAGAATACCATACAAAATGAGTTGGCGGGACTTCAGG
GTCGTGCGCCGCTGCAGGTGGAGGATAGCTTCGATGACGCTGCCACCTAC
ACAAGCTTACAGATTGCCTTCAAGAATCCCGTCCTCATACCCATGGATGA
TATAATGCCTCCAACTCCGCCCATGTCGCAATGCGCTCCCGAAGATGCCC
ATCAGCATTACGATCCCGTCGAGGTGAACTCTCAGGCCCGCAAGCCGGAG
ACTCCGATGCGACCAGTTCCTCCAGTCCCGCCGGCAATTCTAACAATTCA
ATATCCACCAGAAGAGGATAAGTTGCCCCCATTGCCACCGAAAAGAATTC
GAAAGCAGGACAGCAATGCTGAGAATCGATCAATCGAGGCCAATACGGTT
CAGACCAAGCCATCTACAGGCGAGTCTCCTCTAAACAAAAGACTCCCACC
TGCTCCAAAGAACCCGAACTTTAATACACTGCCCAGGCAGAAGAAGCCGG
GATTCTTTTCGAAGCTTTTTTCGCGCCGCAAGAGCAAACCAGATTTGGCC
CAGGGGCAGGAGAACAGCTCTATATTGGATTCCAAGGCAAATAGCAGGGA
GCCAAGTATAGGTCACTTTAACATGCAAGACCCGATGAGGGCATCGCTGC
GCTCCTCCAAGTCAGCTGCCCCGTTCATCTCGAATCCAGCGCCTGCCAAA
TCCAGTCCTGTCAAGGCCAAGAAACCAGGATCAAAGCTGACCAAGCCCGT
GGGCAGGAGTGTGAGCAGTGTTTCCGGAAAGAGACCCGCCTACCTGAATG
CTGATGTGGTGCATATACCGCTGAAAGGTGACAGTGTCAATAGTTTGCCA
CAGCAACAGCGAACCGAGGGCTACTCCCAATCCAGTACGATTTCGGTGGG
AGCTGGGTTGGATAGACGCACTGCATCTGCACTACAGCTGGCTGACATAC
CAATTAGTGAGGGCGGAATGGAACTGGTTGCCATTGCCGATCGACAAAGT
CTACACAATTTGGTCAGCTCCATAGAGGGTCACTTCAATGTCCAACTGGA
CCCCAATTTGGATCTGACCGAGGCCGAGCACTTTGCCCTGTACACGAGTA
TTCCGCCACTTGCGGCGGCCAGTGAATTTGACGAGACCTCCGCCTACTAT
GCTCCCGTGGATGCTGGCGAGATTTTAACGCCGGATGAGGTGGCCAAGCG
ATTGGCTGCGGCAAATGGCATCTAGATTTGTTGATTTGATTGTTTATATT
CTTTATAGGCAAACGAACCGAGGAAAATCCTCGAACGAAACCCAATAACG
AAGCAAGTTGGCTTCAAGCCAGTGGAAATTGCATTGTATTTCTCGGAATC
TGTTTCCATTAACTCTGGCGCCACAAATTGTCCACTTGTTGTAAGGCCGG
CTGGAGCGCAATGTCTTCAGTACCTTAATGAATTTGTATTTGTTTTATAA
TTAATAATTGTGCTAAAAGTATCCCCAAAATAATTTGTAAGTGATACCAG
GCAAAAGACCCCAAAGAAATGGGTCAAACCCAATGATTTGTTTGTTGTCC
AGGTGGCCCATTTGAAGGGGCCAACCTAACTATTGTATTTAAGCGAAATC
ACTCAATTTTCAGAGTAGCGTAAGATTTCCCAATGGAATCGAATATATTG
TTTAAATTGAAACCGAAAACCCGATCATATGTACCTACAACACGGTGTGT
ATATTTTGTCTTATAGATCCAGCGCACTTGAGGCGGAAACGTCAGAAGAC
TGGCGGTGATCCCATGCACCTGCTGCTCCAGCAGCAGCAGAAACAGCAAT
TGCAGAATGACCACCAGGATGGCAGTAAGTTGACTGTTGAGATTTTTCCC
AAACTGGTGTCGGTCTTCTCTATCCTCTATTGTGTCTGTCGCGACTTTGA
GTCGATTTTTTCCCATGTGTTTGAATCCACTTGGGTACACATACTTTGTT
TTGAGATGGATGCTAGACATCTAACTGAATCCTACCTAGTCAAATAGCAT
CATATATATTTGATGTTTTCTTCGGTATACCAAAGACTACTTAACAAATC
ATCGCCCCCGATGACGTATTACTCGAATAGACTCTTTTAGAAACTATTAG
AAAGCACTCAATCAATGCACAAATCCACTCACCCAGAACACCATGAAATC
TACGTAAAGGGGGGTAATGTCCCCACTATATTTATATATTGATTTACATG
ATTAGTCGAAATTATAGTCAAGAAAATGAGAGATTGATTCGAAATCAATA
TGAAATTTTTGTCGCTTTTCTACTCGTTTACATGCGAAGAATATTTGATA
TTTTTATATACGAAAAATTAAGAGTTTGGTAAAAATATTTTGTATAAAAT
ATTGTAGCTTAATAAAACAAAAAAAAAAAATCAAGAAAAATTCAAAAAAA
AAAAGTAAAGTTTATTTTATTAAAAAGGAACTGTTTATAGGTTGAAGTAA
GTTTTGCTCTAGGATTTCTTACTTCCAAGAAGAGTTTACAGTTCTGAGTA
AGTCTTTATCGGAGTTCAAAACAGTTCATTTCAGTCTTTGACCTTTTTTG
TTTTATTTCGGAAATTTATATGCATGATTACATTTTATTATTTTGCTTAT
TTAGTTTTTATCAAAAACAGCGATATTTTTAATTGTTTCCCATTGCCCAG
GCAGAGTTTTTAATCTGTACGCCGCACTAACGAATCTAAATACTATCTAA
TCTTTTATGGTTTACTTCAATCTTTGGTTTTTATATTGTTTGCTTTACAC
GTTCTGCTTGATTTGTTAACTTTTTATTTTTGATTGCTGGTTTTATTGTA
GGACAAACTAACATGAATTGCTGGAATACACAAAACATACCGCCCATTAA
AACGGAACCAAGAGGTGAGTTTTATACACTAAAACTACAAAAAAAAAACC
TAGTTAAAACTTCCATAAACATCAAATGGCCTACTTTAAAAGTGTAAATG
GAATTTCGACTGATTATTATTAAAAACGGCTCGCTTCGCTTTGTAGATAC
CTCGCCACAACCCTTTGGGCTTTCTTATCGGGCGCCTCCTGAGCTCACAC
CCTCGCCGCAGCCGCTGTCGCCATCGAGCAACTACAACCACAACAGCACG
CCCTCGCCCTACAACATGGCCTCCGCGGTCACGCCCACCAATGGCCAGCA
GCAACTGATGTCGCCCAACCATCCACAGCAGCAACAGCAACAGCAGCAAT
ATGGAGCAACTGATCTGGGGAGCAACTACAATCCGTTTGCCCAGCAGGTC
CTTGCCCAGCAGCAGCAGCAGCAGCATCAGCAGCAGCAGCAACAGCACCA
GCATCAGCACCAGCAGCAACACCAACAGCAGCAGCAGCAGCAGCAGCAGC
AACAGCAACAGTCCTTGCAATTTCATGCCAATCCCTTTGGCAATCCTGGC
GGCAATAGCTGGGAAAGTAAATTCTCGGCGGCAGCTGTTGCAGCAGCGGC
AGCAACTGCGACAGGAGCAGCACCTGCCAACGGCAATAGCAATAATCTCA
GCAATCTCAACAATCCCTTCACCATGCACAACCTGCTGACATCGGGCGGA
GGTCCTGGCAACGCCAACAATCTGCAGTGGAACCTGACCACAAATCATCT
GCACAATCAGCATACGCTTCATCAGCAGCAGCAGCTTCAGCAGCAGCAGC
AGCAGCAGTACGACAATACTGCGCCCACCAACAACAATGCCAACCTTAAT
AACAATAATAACAATAATAATACCGCTGGCAATCAAGCGGATAATAATGG
GCCAACGCTCAGCAATCTGCTTAGCTTCGATAGCGGGCAGTTGGTGCACA
TAAACTCAGAGGATCAGCAGATACTGCGCCTCAATTCGGAAGATCTGCAG
ATATCGAACCTGTCCATATCCACGTAATACCTTTTTCACAACGAACCAGA
GCAGAGCAAGAACGGAGGAGTCAGTAGGATGATGATATGATAATGTTGTA
TAATTAAATCTAACCGACCTGGTCGTCGTCTAAATGATTGTTTAGTGCTG
TAATAACTAGTCTTAAGGCGAAATGTAATGTGTTTTTGTAGGAAGTAAGG
TTTTTTAAATATGAATAAATTAATCGTTTTAGCAGAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAA

LP16165.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:27:53
Subject Length Description Subject Range Query Range Score Percent Strand
dorsal-RC 4768 dorsal-RC 557..4768 305..4516 21060 100 Plus
dorsal-RD 2654 dorsal-RD 52..1354 11..1313 6515 100 Plus
dorsal-RD 2654 dorsal-RD 1524..2611 5095..6188 5355 99.4 Plus
dorsal-RE 2504 dorsal-RE 1410..2497 5095..6188 5355 99.4 Plus
dorsal-RE 2504 dorsal-RE 232..1240 305..1313 5045 100 Plus
dorsal-RD 2654 dorsal-RD 1353..1463 3815..3925 555 100 Plus
dorsal-RE 2504 dorsal-RE 1239..1349 3815..3925 555 100 Plus
dorsal-RD 2654 dorsal-RD 1463..1525 4902..4964 315 100 Plus
dorsal-RE 2504 dorsal-RE 1349..1411 4902..4964 315 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:54:20
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 17436060..17440525 5701..1233 21875 99.4 Minus
chr2L 23010047 chr2L 17435481..17435965 6185..5701 2425 100 Minus
chr2L 23010047 chr2L 17440582..17440978 1236..840 1985 100 Minus
chr2L 23010047 chr2L 17441299..17441654 660..305 1735 99.2 Minus
chr2L 23010047 chr2L 17443884..17444179 306..11 1480 100 Minus
chr2L 23010047 chr2L 17441048..17441227 839..660 900 100 Minus
chr2L 23010047 chr2L 17440164..17440226 1627..1565 195 87.3 Minus
chr2L 23010047 chr2L 17440131..17440193 1594..1532 195 87.3 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:57:18 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:54:15
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 17437419..17441881 5701..1233 22220 99.9 Minus
2L 23513712 2L 17436837..17437324 6188..5701 2440 100 Minus
2L 23513712 2L 17441938..17442334 1236..840 1985 100 Minus
2L 23513712 2L 17442652..17443007 660..305 1780 100 Minus
2L 23513712 2L 17445249..17445544 306..11 1480 100 Minus
2L 23513712 2L 17442404..17442583 839..660 900 100 Minus
2L 23513712 2L 17441520..17441582 1627..1565 195 87.3 Minus
2L 23513712 2L 17441487..17441549 1594..1532 195 87.3 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:22:23
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 17437419..17441881 5701..1233 22230 99.8 Minus
2L 23513712 2L 17436837..17437324 6188..5701 2440 100 Minus
2L 23513712 2L 17441938..17442334 1236..840 1985 100 Minus
2L 23513712 2L 17442652..17443007 660..305 1780 100 Minus
2L 23513712 2L 17445249..17445544 306..11 1480 100 Minus
2L 23513712 2L 17442404..17442583 839..660 900 100 Minus
Blast to na_te.dros performed 2019-03-16 07:54:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2313..2855 5246..5787 482 59.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6729..6950 5268..5483 393 66.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2271..2824 5245..5768 374 58.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..7248 5266..5832 364 58.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2348..2998 5155..5813 329 56 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6746..6951 5246..5457 327 64.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2509..3005 5177..5640 308 57.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2726..2966 5223..5461 273 60 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2724..3336 5160..5794 258 54 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6738..7048 5177..5493 246 56.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6770..6951 5236..5424 234 64.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2499..2958 5159..5632 221 55.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6757..7200 5155..5594 208 55.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6741..6988 1494..1748 184 57.4 Plus
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 7288..7493 5219..5425 140 55.2 Plus
roo 9092 roo DM_ROO 9092bp 1095..1156 5247..5305 140 74.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2905..3000 1581..1682 136 62.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2926..2999 1530..1603 136 64.9 Plus
Stalker2 7672 Stalker2 STALKER2 7672bp 1428..1521 4484..4392 134 61.7 Minus
TART-C 11124 TART-C TARTC 11124bp 8741..8974 5219..5456 134 55.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2730..2869 1562..1704 131 56.6 Plus
roo 9092 roo DM_ROO 9092bp 1073..1153 5246..5331 131 67 Plus
roo 9092 roo DM_ROO 9092bp 1069..1122 3866..3919 126 70.4 Plus
Max-element 8556 Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). 1038..1187 261..106 125 58 Minus
Tabor 7345 Tabor TABOR 7345bp 6175..6275 1593..1693 125 64.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2346..2386 3879..3919 124 78 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1503..1598 5230..5333 123 66.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1534..1585 5241..5298 123 74.1 Plus

LP16165.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:55:05 Download gff for LP16165.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 17436060..17436157 5604..5701 100 == Minus
chr2L 17436236..17436299 5462..5525 100 == Minus
chr2L 17436402..17440523 1235..5356 98 <- Minus
chr2L 17440584..17440978 840..1234 100 <- Minus
chr2L 17441048..17441226 661..839 100 <- Minus
chr2L 17441299..17441652 307..660 99 <- Minus
chr2L 17443884..17444187 3..306 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:14:47 Download gff for LP16165.complete
Subject Subject Range Query Range Percent Splice Strand
dl-RC 1..3000 326..3325 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:54:31 Download gff for LP16165.complete
Subject Subject Range Query Range Percent Splice Strand
dl-RC 1..3000 326..3325 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:40:44 Download gff for LP16165.complete
Subject Subject Range Query Range Percent Splice Strand
dl-RF 1..3000 326..3325 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:44:22 Download gff for LP16165.complete
Subject Subject Range Query Range Percent Splice Strand
dl-RF 1..3000 326..3325 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-08-20 14:50:52 Download gff for LP16165.complete
Subject Subject Range Query Range Percent Splice Strand
dl-RC 552..4767 299..4516 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:54:31 Download gff for LP16165.complete
Subject Subject Range Query Range Percent Splice Strand
dl-RC 552..4767 299..4516 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:40:44 Download gff for LP16165.complete
Subject Subject Range Query Range Percent Splice Strand
dl-RF 16..4481 3..4468 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:44:22 Download gff for LP16165.complete
Subject Subject Range Query Range Percent Splice Strand
dl-RF 16..4481 3..4468 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:55:05 Download gff for LP16165.complete
Subject Subject Range Query Range Percent Splice Strand
2L 17442652..17443005 307..660 100 <- Minus
2L 17436840..17437323 5702..6185 100 <- Minus
2L 17437419..17441879 1235..5701 99 <- Minus
2L 17441940..17442334 840..1234 100 <- Minus
2L 17442404..17442582 661..839 100 <- Minus
2L 17445249..17445552 3..306 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:55:05 Download gff for LP16165.complete
Subject Subject Range Query Range Percent Splice Strand
2L 17442652..17443005 307..660 100 <- Minus
2L 17436840..17437323 5702..6185 100 <- Minus
2L 17437419..17441879 1235..5701 99 <- Minus
2L 17441940..17442334 840..1234 100 <- Minus
2L 17442404..17442582 661..839 100 <- Minus
2L 17445249..17445552 3..306 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:55:05 Download gff for LP16165.complete
Subject Subject Range Query Range Percent Splice Strand
2L 17442652..17443005 307..660 100 <- Minus
2L 17436840..17437323 5702..6185 100 <- Minus
2L 17437419..17441879 1235..5701 99 <- Minus
2L 17441940..17442334 840..1234 100 <- Minus
2L 17442404..17442582 661..839 100 <- Minus
2L 17445249..17445552 3..306 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:40:44 Download gff for LP16165.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 17436840..17437323 5702..6185 100 <- Minus
arm_2L 17437419..17441879 1235..5701 99 <- Minus
arm_2L 17441940..17442334 840..1234 100 <- Minus
arm_2L 17442404..17442582 661..839 100 <- Minus
arm_2L 17442652..17443005 307..660 100 <- Minus
arm_2L 17445249..17445552 3..306 98   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:45:03 Download gff for LP16165.complete
Subject Subject Range Query Range Percent Splice Strand
2L 17445249..17445552 3..306 98   Minus
2L 17436840..17437323 5702..6185 100 <- Minus
2L 17437419..17441879 1235..5701 99 <- Minus
2L 17441940..17442334 840..1234 100 <- Minus
2L 17442404..17442582 661..839 100 <- Minus
2L 17442652..17443005 307..660 100 <- Minus

LP16165.pep Sequence

Translation from 325 to 3324

> LP16165.pep
MFPNQNNGAAPGQGPAVDGQQSLNYNGLPAQQQQQLAQSTKNVRKKPYVK
ITEQPAGKALRFRYECEGRSAGSIPGVNSTPENKTYPTIEIVGYKGRAVV
VVSCVTKDTPYRPHPHNLVGKEGCKKGVCTLEINSETMRAVFSNLGIQCV
KKKDIEAALKAREEIRVDPFKTGFSHRFQPSSIDLNSVRLCFQVFMESEQ
KGRFTSPLPPVVSEPIFDKKAMSDLVICRLCSCSATVFGNTQIILLCEKV
AKEDISVRFFEEKNGQSVWEAFGDFQHTDVHKQTAITFKTPRYHTLDITE
PAKVFIQLRRPSDGVTSEALPFEYVPMDSGKHTFWNLHRHLKRKPDEDLF
QQILRLDAKREVQPPTIEVIDLDTPKIDVQREIPSEMEFNHEESQQSEPA
LEQEQSVQQEQYTQEQSLQQEQYTQEQSLQQEQYLQQLEQQQSFQLEEPM
QQDQELPAQQSFDQAIDHLPDHTSDHIPEDMEAADAHAEAEAHRLRSEQE
KEIDTIIDEKVRELEQLDLGQQLEPRPLTANDKITEWMKSSEIEQQVHEP
SPTAEADVLDSALEISKADKTLDELLETVAELDEIYTDFKVQRDTYKNTI
QNELAGLQGRAPLQVEDSFDDAATYTSLQIAFKNPVLIPMDDIMPPTPPM
SQCAPEDAHQHYDPVEVNSQARKPETPMRPVPPVPPAILTIQYPPEEDKL
PPLPPKRIRKQDSNAENRSIEANTVQTKPSTGESPLNKRLPPAPKNPNFN
TLPRQKKPGFFSKLFSRRKSKPDLAQGQENSSILDSKANSREPSIGHFNM
QDPMRASLRSSKSAAPFISNPAPAKSSPVKAKKPGSKLTKPVGRSVSSVS
GKRPAYLNADVVHIPLKGDSVNSLPQQQRTEGYSQSSTISVGAGLDRRTA
SALQLADIPISEGGMELVAIADRQSLHNLVSSIEGHFNVQLDPNLDLTEA
EHFALYTSIPPLAAASEFDETSAYYAPVDAGEILTPDEVAKRLAAANGI*

LP16165.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:40:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15103-PA 680 GF15103-PA 1..346 1..344 1695 91.5 Plus
Dana\GF15105-PA 622 GF15105-PA 33..331 28..326 661 46.1 Plus
Dana\GF18430-PA 977 GF18430-PA 95..441 7..329 388 33.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:40:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21746-PA 683 GG21746-PA 1..337 1..344 1730 95.3 Plus
Dere\GG21748-PA 666 GG21748-PA 71..378 47..357 726 46.2 Plus
Dere\GG17396-PA 961 GG17396-PA 127..444 29..326 407 36.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 13:41:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10077-PA 708 GH10077-PA 1..337 1..344 1599 89.2 Plus
Dgri\GH10078-PA 967 GH10078-PA 61..965 39..999 1282 39.3 Plus
Dgri\GH18237-PA 974 GH18237-PA 152..449 49..329 397 37.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:06:42
Subject Length Description Subject Range Query Range Score Percent Strand
dl-PC 999 CG6667-PC 1..999 1..999 5171 100 Plus
dl-PF 999 CG6667-PF 1..999 1..999 5171 100 Plus
dl-PB 677 CG6667-PB 1..509 1..454 1769 71.1 Plus
dl-PA 677 CG6667-PA 1..509 1..454 1769 71.1 Plus
dl-PE 677 CG6667-PE 1..509 1..454 1769 71.1 Plus
dl-PD 677 CG6667-PD 1..509 1..454 1769 71.1 Plus
Dif-PC 987 CG6794-PC 20..986 7..999 1426 37.5 Plus
Dif-PD 667 CG6794-PD 20..480 7..428 719 38.7 Plus
Dif-PB 667 CG6794-PB 20..480 7..428 719 38.7 Plus
Dif-PA 667 CG6794-PA 20..480 7..428 719 38.7 Plus
Rel-PD 859 CG11992-PD 30..334 39..326 391 36.6 Plus
Rel-PA 971 CG11992-PA 142..446 39..326 391 36.6 Plus
Rel-PB 971 CG11992-PB 142..446 39..326 391 36.6 Plus
Rel-PC 971 CG11992-PC 142..446 39..326 391 36.6 Plus
CG44085-PH 756 CG44085-PH 256..688 289..749 168 21.9 Plus
CG44085-PL 833 CG44085-PL 333..765 289..749 168 21.9 Plus
CG44085-PI 833 CG44085-PI 333..765 289..749 168 21.9 Plus
CG44085-PC 836 CG44085-PC 333..765 289..749 168 21.9 Plus
CG44085-PM 864 CG44085-PM 218..650 289..749 168 21.9 Plus
CG44085-PF 902 CG44085-PF 256..688 289..749 168 21.9 Plus
CG44085-PD 918 CG44085-PD 256..688 289..749 168 21.9 Plus
CG44085-PG 942 CG44085-PG 256..688 289..749 168 21.9 Plus
CG44085-PK 979 CG44085-PK 333..765 289..749 168 21.9 Plus
CG44085-PJ 979 CG44085-PJ 333..765 289..749 168 21.9 Plus
CG44085-PN 1007 CG44085-PN 333..765 289..749 168 21.9 Plus
CG44085-PP 2246 CG44085-PP 229..661 289..749 168 21.9 Plus
CG44085-PO 2381 CG44085-PO 218..650 289..749 168 21.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:41:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16541-PA 705 GI16541-PA 1..348 1..344 1570 86.2 Plus
Dmoj\GI16552-PA 962 GI16552-PA 51..609 43..643 951 38.5 Plus
Dmoj\GI16552-PA 962 GI16552-PA 777..961 793..999 422 51.4 Plus
Dmoj\GI10193-PA 956 GI10193-PA 144..441 49..329 387 37 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:41:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18753-PA 707 GL18753-PA 1..349 1..344 1705 91.3 Plus
Dper\GL18755-PA 659 GL18755-PA 69..412 42..377 661 43.4 Plus
Dper\GL12490-PA 878 GL12490-PA 44..343 49..329 361 34.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:41:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19765-PA 700 GA19765-PA 1..350 1..344 1698 91 Plus
Dpse\GA19867-PA 659 GA19867-PA 69..412 42..377 660 43.4 Plus
Dpse\GA11317-PA 968 GA11317-PA 136..433 49..329 379 36.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:41:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17128-PA 677 GM17128-PA 1..337 1..344 1745 96.2 Plus
Dsec\GM17131-PA 664 GM17131-PA 61..357 32..326 736 48 Plus
Dsec\Rel-PA 970 GM26286-PA 129..448 29..328 416 36.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:41:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\dl-PA 679 GD21870-PA 1..337 1..344 1734 95.6 Plus
Dsim\Dif-PA 662 GD21872-PA 75..382 44..354 734 46.2 Plus
Dsim\Rel-PA 972 GD20822-PA 129..448 29..328 411 36.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:41:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16232-PA 697 GJ16232-PA 1..349 1..344 1575 86.3 Plus
Dvir\GJ16233-PA 603 GJ16233-PA 29..328 44..363 790 49.1 Plus
Dvir\GJ23481-PA 960 GJ23481-PA 145..442 49..329 388 36.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:41:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10525-PA 701 GK10525-PA 1..343 1..344 1615 88.4 Plus
Dwil\GK24830-PA 908 GK24830-PA 33..313 46..326 763 53.1 Plus
Dwil\GK24830-PA 908 GK24830-PA 411..906 522..999 596 38.5 Plus
Dwil\GK14061-PA 929 GK14061-PA 132..429 49..329 378 36.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:41:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\dl-PA 672 GE13136-PA 1..338 1..344 1712 93.9 Plus
Dyak\Dif-PA 622 GE13138-PA 70..383 47..364 703 44 Plus
Dyak\Rel-PA 973 GE24800-PA 127..444 29..326 409 36 Plus

LP16165.hyp Sequence

Translation from 325 to 3324

> LP16165.hyp
MFPNQNNGAAPGQGPAVDGQQSLNYNGLPAQQQQQLAQSTKNVRKKPYVK
ITEQPAGKALRFRYECEGRSAGSIPGVNSTPENKTYPTIEIVGYKGRAVV
VVSCVTKDTPYRPHPHNLVGKEGCKKGVCTLEINSETMRAVFSNLGIQCV
KKKDIEAALKAREEIRVDPFKTGFSHRFQPSSIDLNSVRLCFQVFMESEQ
KGRFTSPLPPVVSEPIFDKKAMSDLVICRLCSCSATVFGNTQIILLCEKV
AKEDISVRFFEEKNGQSVWEAFGDFQHTDVHKQTAITFKTPRYHTLDITE
PAKVFIQLRRPSDGVTSEALPFEYVPMDSGKHTFWNLHRHLKRKPDEDLF
QQILRLDAKREVQPPTIEVIDLDTPKIDVQREIPSEMEFNHEESQQSEPA
LEQEQSVQQEQYTQEQSLQQEQYTQEQSLQQEQYLQQLEQQQSFQLEEPM
QQDQELPAQQSFDQAIDHLPDHTSDHIPEDMEAADAHAEAEAHRLRSEQE
KEIDTIIDEKVRELEQLDLGQQLEPRPLTANDKITEWMKSSEIEQQVHEP
SPTAEADVLDSALEISKADKTLDELLETVAELDEIYTDFKVQRDTYKNTI
QNELAGLQGRAPLQVEDSFDDAATYTSLQIAFKNPVLIPMDDIMPPTPPM
SQCAPEDAHQHYDPVEVNSQARKPETPMRPVPPVPPAILTIQYPPEEDKL
PPLPPKRIRKQDSNAENRSIEANTVQTKPSTGESPLNKRLPPAPKNPNFN
TLPRQKKPGFFSKLFSRRKSKPDLAQGQENSSILDSKANSREPSIGHFNM
QDPMRASLRSSKSAAPFISNPAPAKSSPVKAKKPGSKLTKPVGRSVSSVS
GKRPAYLNADVVHIPLKGDSVNSLPQQQRTEGYSQSSTISVGAGLDRRTA
SALQLADIPISEGGMELVAIADRQSLHNLVSSIEGHFNVQLDPNLDLTEA
EHFALYTSIPPLAAASEFDETSAYYAPVDAGEILTPDEVAKRLAAANGI*

LP16165.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:09:04
Subject Length Description Subject Range Query Range Score Percent Strand
dl-PC 999 CG6667-PC 1..999 1..999 5171 100 Plus
dl-PF 999 CG6667-PF 1..999 1..999 5171 100 Plus
dl-PB 677 CG6667-PB 1..509 1..454 1769 71.1 Plus
dl-PA 677 CG6667-PA 1..509 1..454 1769 71.1 Plus
dl-PE 677 CG6667-PE 1..509 1..454 1769 71.1 Plus