BDGP Sequence Production Resources |
Search the DGRC for LP17418
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 174 |
Well: | 18 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9065-RA |
Protein status: | LP17418.pep: gold |
Sequenced Size: | 502 |
Gene | Date | Evidence |
---|---|---|
CG9065-RA | 2009-01-21 | est gleaning |
CG9065 | 2009-06-08 | Manual selection by Joe Carlson |
502 bp assembled on 2009-10-06
GenBank Submission: BT099957.1
> LP17418.complete CCGATAAACCGAATTGTGGTGAAATATCCGTCTCGAACCGCTTTTGACCG ATACCCGATTGAAGAATGGGCAACAGTGCATCTCAAGGAGTTGCAGCTCC AAGTGTTTCGGCGGCCCACCCGTTGACCACCGCATCCGCAGCCACCGCAT CCACAACCACCGCATCCGCAGCCACCGCATCCGGCGAGAAGCCCAAGTGC AAGGCCTGTTGCGCCTGCCCGGAGACCAAGAGGGCACGTGACGCCTGCAT TGTGGAGAACGGCGAGGAGAATTGCTTGGCGCTGATAGAGGCGCACAAGA AGTGCATGCGCGATGCCGGCTTCAATATCTAGATATACCGACACATCCTG GGATGAGGACACCAGGATTATAGGATAACACTAGTCCTGCACACACTCCC CCCAGTGCCACTCCTCGGATCCCCAGCCCCTTCAACTGTTTGTTTTTGTT GCATCTCAAGCTAATTATAGAACTAAATTAATTGAAAAAAAAAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 14974195..14974432 | 484..247 | 1190 | 100 | Minus |
chrX | 22417052 | chrX | 14974519..14974728 | 247..38 | 1050 | 100 | Minus |
chrX | 22417052 | chrX | 14974792..14974828 | 37..1 | 185 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 14974195..14974431 | 248..484 | 100 | <- | Minus |
chrX | 14974519..14974728 | 38..247 | 100 | <- | Minus |
chrX | 14974792..14974828 | 1..37 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9065-RA | 1..267 | 66..332 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9065-RA | 1..267 | 66..332 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9065-RA | 1..267 | 66..332 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9065-RA | 1..267 | 66..332 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9065-RA | 1..477 | 8..484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9065-RA | 1..477 | 8..484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9065-RA | 38..521 | 1..484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9065-RA | 38..521 | 1..484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15084029..15084265 | 248..484 | 100 | <- | Minus |
X | 15084353..15084562 | 38..247 | 100 | <- | Minus |
X | 15084626..15084662 | 1..37 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15084029..15084265 | 248..484 | 100 | <- | Minus |
X | 15084353..15084562 | 38..247 | 100 | <- | Minus |
X | 15084626..15084662 | 1..37 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15084029..15084265 | 248..484 | 100 | <- | Minus |
X | 15084353..15084562 | 38..247 | 100 | <- | Minus |
X | 15084626..15084662 | 1..37 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 14978659..14978695 | 1..37 | 100 | Minus | |
arm_X | 14978062..14978298 | 248..484 | 100 | <- | Minus |
arm_X | 14978386..14978595 | 38..247 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15092724..15092760 | 1..37 | 100 | Minus | |
X | 15092127..15092363 | 248..484 | 100 | <- | Minus |
X | 15092451..15092660 | 38..247 | 100 | <- | Minus |
Translation from 65 to 331
> LP17418.hyp MGNSASQGVAAPSVSAAHPLTTASAATASTTTASAATASGEKPKCKACCA CPETKRARDACIVENGEENCLALIEAHKKCMRDAGFNI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9065-PA | 88 | CG9065-PA | 1..88 | 1..88 | 457 | 100 | Plus |
Translation from 65 to 331
> LP17418.pep MGNSASQGVAAPSVSAAHPLTTASAATASTTTASAATASGEKPKCKACCA CPETKRARDACIVENGEENCLALIEAHKKCMRDAGFNI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21058-PA | 86 | GF21058-PA | 39..86 | 41..88 | 251 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19421-PA | 78 | GG19421-PA | 1..78 | 1..88 | 354 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24313-PA | 77 | GH24313-PA | 1..77 | 1..88 | 244 | 60.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9065-PA | 88 | CG9065-PA | 1..88 | 1..88 | 457 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21558-PA | 78 | GI21558-PA | 1..78 | 1..88 | 244 | 64.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15207-PA | 76 | GL15207-PA | 1..76 | 1..88 | 264 | 61.4 | Plus |
Dper\GL15625-PA | 75 | GL15625-PA | 1..75 | 1..88 | 241 | 55.7 | Plus |
Dper\GL25652-PA | 98 | GL25652-PA | 1..98 | 1..88 | 210 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22906-PA | 76 | GA22906-PA | 1..76 | 1..88 | 245 | 61.4 | Plus |
Dpse\GA29150-PA | 75 | GA29150-PA | 1..75 | 1..88 | 235 | 54.5 | Plus |
Dpse\GA23194-PA | 75 | GA23194-PA | 1..75 | 1..88 | 235 | 54.5 | Plus |
Dpse\GA25371-PA | 98 | GA25371-PA | 1..98 | 1..88 | 213 | 52 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12008-PA | 78 | GM12008-PA | 1..78 | 1..88 | 380 | 88.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15822-PA | 78 | GD15822-PA | 1..78 | 1..88 | 373 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15703-PA | 78 | GJ15703-PA | 1..78 | 1..88 | 268 | 61.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16345-PA | 80 | GK16345-PA | 1..80 | 1..88 | 262 | 64.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16072-PA | 78 | GE16072-PA | 1..78 | 1..88 | 356 | 83 | Plus |