BDGP Sequence Production Resources |
Search the DGRC for LP18071
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 180 |
Well: | 71 |
Vector: | pOT2 |
Associated Gene/Transcript | CG15347-RB |
Protein status: | LP18071.pep: gold |
Sequenced Size: | 999 |
Gene | Date | Evidence |
---|---|---|
CG15347 | 2010-12-02 | CDS novel splice |
999 bp assembled on 2011-02-18
GenBank Submission: BT126089.1
> LP18071.complete TAACCAGTCGCAACATTCGATCGTCGTGAAATTAGTTACATCAGTTATCA GCCATGAAGTTTTACCTGTTGGTGATTGCAGCCCTCTCGTTTTTGGCCTA CATCAGTTGTGGCATGACTCAATCGAAACGCTCCGTTCCACTCGCTCAAT TTGCAGATGGATGCATCCAGTGCAATTCGAAGGACAACGAACGCTGCGCC ACAGATCCATTGAGCCTGCTCAATCGCAACTGTTCCGATGGATCCTCCAA CTGCTATTCCCGCGTCCTGGATGGCTACACAATTCGCGGCTGTGCCGTCG ATCTGGACAACGCCACGCGTAATTCGTGCAACAACGAGCTACTGTGCCAG CTGTGCACCTACAGCGAGGGATGCAATCGAAACACCTTCCCGTTGAGCCG CCTCATGTGCCTACAGTGCACAGGGAACTCGACCTCGTCGTCCTGCGCCA CAGAGACCTATGTATCGGCCAAGATCTGCCCGCTGTACAAGTTCGGCGAC AAGTGCTACATTCGCAATAGCAATCGCACCGTGGACGGATCCTTCCAGCG CGGCTGTCTCACCTCGGCGAATGCCAGGAAGCAGTGCGTCAAGGATGGCA ACTGTTATACGTGCGAGGGACGCGGCTGCAACTTTCTGCTGGCCAATGAT ACCAACATTCCGCTGGCACGCGACAGCGGTGCCCAGTTGATCATCTCCAT GACGCTGCTGATCAGCGGTCTTGTCGCCGCCTGGAGACTCTAAGATGTAA CGACGGCCAGAGTCGAATGATGGACGAAAGTCAATCATGCCACAGACCCA GTTCTTTTAGAAATTCCCGTCTTATTATTTTCTACATTCTAAAACATCAT TATACATACATACATACACTGGGATGTTACATTTATACTCGTTTATTTCA TTACTTTGAACAAAACGTTAATAAAGATAACTAAACTAAAGAAGACAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 8350271..8350947 | 946..270 | 3370 | 99.9 | Minus |
chrX | 22417052 | chrX | 8351001..8351160 | 270..111 | 800 | 100 | Minus |
chrX | 22417052 | chrX | 8352543..8352654 | 112..1 | 560 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 8350271..8350946 | 271..946 | 99 | <- | Minus |
chrX | 8351001..8351159 | 112..270 | 100 | <- | Minus |
chrX | 8352544..8352654 | 1..111 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15347-RB | 1..690 | 54..743 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15347-RB | 1..690 | 54..743 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15347-RB | 1..690 | 54..743 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15347-RB | 19..964 | 1..946 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15347-RB | 23..968 | 1..946 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15347-RB | 23..968 | 1..946 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8458494..8459169 | 271..946 | 100 | <- | Minus |
X | 8459224..8459382 | 112..270 | 100 | <- | Minus |
X | 8460766..8460876 | 1..111 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8458494..8459169 | 271..946 | 100 | <- | Minus |
X | 8459224..8459382 | 112..270 | 100 | <- | Minus |
X | 8460766..8460876 | 1..111 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8458494..8459169 | 271..946 | 100 | <- | Minus |
X | 8459224..8459382 | 112..270 | 100 | <- | Minus |
X | 8460766..8460876 | 1..111 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 8352527..8353202 | 271..946 | 100 | <- | Minus |
arm_X | 8353257..8353415 | 112..270 | 100 | <- | Minus |
arm_X | 8354799..8354909 | 1..111 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8468864..8468974 | 1..111 | 100 | Minus | |
X | 8466592..8467267 | 271..946 | 100 | <- | Minus |
X | 8467322..8467480 | 112..270 | 100 | <- | Minus |
Translation from 53 to 742
> LP18071.hyp MKFYLLVIAALSFLAYISCGMTQSKRSVPLAQFADGCIQCNSKDNERCAT DPLSLLNRNCSDGSSNCYSRVLDGYTIRGCAVDLDNATRNSCNNELLCQL CTYSEGCNRNTFPLSRLMCLQCTGNSTSSSCATETYVSAKICPLYKFGDK CYIRNSNRTVDGSFQRGCLTSANARKQCVKDGNCYTCEGRGCNFLLANDT NIPLARDSGAQLIISMTLLISGLVAAWRL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15347-PB | 229 | CG15347-PB | 1..229 | 1..229 | 1231 | 100 | Plus |
CG15347-PA | 214 | CG15347-PA | 1..214 | 1..229 | 1132 | 93.4 | Plus |
CG13492-PD | 2979 | CG13492-PD | 2799..2975 | 37..226 | 204 | 26.9 | Plus |
CG13492-PD | 2979 | CG13492-PD | 1538..1695 | 37..193 | 184 | 31.7 | Plus |
CG13492-PD | 2979 | CG13492-PD | 2372..2540 | 27..198 | 180 | 31.5 | Plus |
CG13492-PD | 2979 | CG13492-PD | 1956..2114 | 27..193 | 177 | 33.1 | Plus |
CG13492-PD | 2979 | CG13492-PD | 698..849 | 37..193 | 176 | 31.1 | Plus |
CG13492-PD | 2979 | CG13492-PD | 278..432 | 37..193 | 169 | 33.9 | Plus |
CG13492-PD | 2979 | CG13492-PD | 2638..2790 | 37..195 | 162 | 29.9 | Plus |
CG15773-PB | 319 | CG15773-PB | 33..177 | 37..193 | 160 | 29.4 | Plus |
CG4363-PA | 199 | CG4363-PA | 24..180 | 34..193 | 155 | 25.5 | Plus |
CG13492-PD | 2979 | CG13492-PD | 1120..1271 | 37..193 | 154 | 26.9 | Plus |
Translation from 53 to 742
> LP18071.pep MKFYLLVIAALSFLAYISCGMTQSKRSVPLAQFADGCIQCNSKDNERCAT DPLSLLNRNCSDGSSNCYSRVLDGYTIRGCAVDLDNATRNSCNNELLCQL CTYSEGCNRNTFPLSRLMCLQCTGNSTSSSCATETYVSAKICPLYKFGDK CYIRNSNRTVDGSFQRGCLTSANARKQCVKDGNCYTCEGRGCNFLLANDT NIPLARDSGAQLIISMTLLISGLVAAWRL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22583-PA | 214 | GF22583-PA | 1..214 | 1..229 | 886 | 73.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19047-PA | 214 | GG19047-PA | 1..214 | 1..229 | 956 | 79.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12232-PA | 213 | GH12232-PA | 1..191 | 1..207 | 656 | 60.4 | Plus |
Dgri\GH20775-PA | 2920 | GH20775-PA | 2741..2917 | 37..222 | 160 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15347-PB | 229 | CG15347-PB | 1..229 | 1..229 | 1231 | 100 | Plus |
CG15347-PA | 214 | CG15347-PA | 1..214 | 1..229 | 1132 | 93.4 | Plus |
CG13492-PD | 2979 | CG13492-PD | 2799..2975 | 37..226 | 204 | 26.9 | Plus |
CG13492-PD | 2979 | CG13492-PD | 1538..1695 | 37..193 | 184 | 31.7 | Plus |
CG13492-PD | 2979 | CG13492-PD | 2372..2540 | 27..198 | 180 | 31.5 | Plus |
CG13492-PD | 2979 | CG13492-PD | 1956..2114 | 27..193 | 177 | 33.1 | Plus |
CG13492-PD | 2979 | CG13492-PD | 698..849 | 37..193 | 176 | 31.1 | Plus |
CG13492-PD | 2979 | CG13492-PD | 278..432 | 37..193 | 169 | 33.9 | Plus |
CG13492-PD | 2979 | CG13492-PD | 2638..2790 | 37..195 | 162 | 29.9 | Plus |
CG15773-PB | 319 | CG15773-PB | 33..177 | 37..193 | 160 | 29.4 | Plus |
CG15773-PA | 478 | CG15773-PA | 33..177 | 37..193 | 160 | 29.4 | Plus |
CG4363-PA | 199 | CG4363-PA | 24..180 | 34..193 | 155 | 25.5 | Plus |
CG13492-PD | 2979 | CG13492-PD | 1120..1271 | 37..193 | 154 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15766-PA | 214 | GI15766-PA | 1..206 | 1..221 | 660 | 56.6 | Plus |
Dmoj\GI20859-PA | 2960 | GI20859-PA | 2781..2956 | 37..221 | 158 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20247-PA | 217 | GL20247-PA | 1..217 | 1..229 | 796 | 66.4 | Plus |
Dper\GL17513-PA | 2988 | GL17513-PA | 2807..2988 | 35..228 | 172 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13659-PA | 217 | GA13659-PA | 1..217 | 1..229 | 800 | 67.2 | Plus |
Dpse\GA12325-PA | 2988 | GA12325-PA | 2807..2988 | 35..228 | 172 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21334-PA | 214 | GM21334-PA | 1..214 | 1..229 | 1010 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16112-PA | 214 | GD16112-PA | 1..214 | 1..229 | 1025 | 87.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18623-PA | 214 | GJ18623-PA | 1..206 | 1..221 | 728 | 62 | Plus |
Dvir\GJ20594-PA | 2976 | GJ20594-PA | 2795..2976 | 34..229 | 173 | 32.7 | Plus |