BDGP Sequence Production Resources |
Search the DGRC for LP18465
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 184 |
Well: | 65 |
Vector: | pOT2 |
Associated Gene/Transcript | IntS2-RA |
Protein status: | LP18465.pep: gold |
Sequenced Size: | 3711 |
Gene | Date | Evidence |
---|---|---|
CG8211 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8211 | 2004-10-04 | Blastp of sequenced clone |
CG8211 | 2008-04-29 | Release 5.5 accounting |
CG8211 | 2008-08-15 | Release 5.9 accounting |
CG8211 | 2008-12-18 | 5.12 accounting |
3711 bp (3711 high quality bases) assembled on 2004-10-04
GenBank Submission: BT016049
> LP18465.complete ATGAGAGCACCTCTCCAACTGGCCACACTGACGTGTGTTGATTTTTTGGA TGCGGATCGCAGTGGATTCTCGGATTCTCCGGCATTCCCTGCCCCAACTA CAGATCGCCGAGATTAAAGCAGACCCGCGCCGGCATCTCCAGCACGGACA CCCCGCCGGCCAGGCCAATAGAGCGGGACAACCGAGCACACGAGCATTGC CGGGTGCAACAAGTTGGAACGCAACGACAACGACGACGAGGACAAAATGC CGGTGAGGATGTACGATGTATCGCCGCGCGTTTTCTGCGCCATGCAGAAT CTGGACATCACCCTGCTGGCCAGCTATCCGGAGGCGGAGATTCGGCCCGT GCTGCCCTCGCTGGTGCGGATGAGCCTGCTATCGCCACTGGACAACACCG AATCGTCGATGGAGTCGCGCAAAGAGATCCTGGCCGTGCTCATCGGCATC GAGGTGGTGAACAGCATCGTCTCCTACCTGCAAGTCAACTACCATGAGCT GGAGAATGAGCTGAAGAAGGAGCTGCAGGCCCGCCAGAAGTCGGCCTTCT TCGAGGGACAGCAACACGAGTACGGCCTCCAGTCGGGCATCGCACTGGGC TTTGAGCGGGCGGATGTGGCGCGCAAGGTGCGCGTGGTGCTCTCCGAGAT CTTCAATCTGCAGCAGCAGGTCTCCGAGCAGAAACCGGCCGCCCATTCGG AGATGCTGGACGACGGCATCTATCTGGAGGAGGTGGTCGACATTCTGTGC ATTGCTCTCGCCGAGCTGCCCTCCCTGCTGAACATACTGGAGCTAACGGA CGCCCTTGTCCATGTGCCCAACGGACATCGCATCATCTGCGCACTGGTCG CCAACTTTCCGGATTGCTATCGCGACGTTGTGTCCCATGTGATCGCCAAT TGCGACGAGGATGGCAGCGATGGCAAGCACCGGTTAATGCTGCTCATGGG GCTCAGCGAGATGAATCCCTCCCAGGCGCTGGCCAACAGGTCCATGTGCG TGGATATGCTGAAGGTGCCGTCGTTTATGCTTAAGCTCACGCTCAAGCAT CCCGAGGATCTGATAGCCTTCCTCACGGGCCTGCTGCTGGGCAATGACCA GAATCTGCGCTCCTGGTTCGCCGCTTACATCCGCTCCAGCCAGAAGCGGA AGGGGGACGCACTGAATCTGGTGCGCGTGGAGCTGCTACAGAAGGTGATT CAAACGACGACCAATGCGGCGGAGCTGCGCGACTTCAATCTGCAGGGCGC GGTGCTGCTGCGTCTGTACTGTGCCCTGCGCGGCATCGGTGGCCTGAAGT TCAACGACGACGAGATCAATGCTCTGTCGCAGCTGGTCACGAGTTGTCCG CAGGCGACGCCCTCGGGCGTGAGATTTGTAACGCTGGCGCTGTGCATGCT CATCGCCTGTCCCTCGCTGGTGTCCACCATTCCACTGGAGAACAAGGCTG TGGAGTGGCTGCAGTGGCTCATACGGGAGGATGCCTTTTTCTGCAAGCGC CCCGGTACTAGCACCTCGCTGGGTGAGATGCTCCTGCTTCTGGCCATTCA CTTTCACAGCAATCAGATCTCGGCCATCAGCGAGATGGTCTGCTCCACGC TGGCCATGAAGATACCCATCCGGCCGAACAGTACAAACAGAATCAAGCAG CTCTTCACACAGGACCTGTTCACGGAGCAGGTGGTGGCGCTGCATGCGGT TCGCGTACCCGTCACTCCGAATTTAAATGGCACCATACTGTGCTACCTGC CGGTGCACTGCATCCAGCAACTGCTGAAATCGAGGACATTTCTCAAGCAC AAAGTGCCCATTAAGTCGTGGATCTTCAAGCAAATATGCAGTTCGGTGAG GCCAGTGCATCCTGTGATGCCGGCCCTGGTGGAGGTCTTTGTCAACACGC TGATAATACCCAATCCCACCGGAAAAGTGAATATTGATCACATGCACCGG CCCTTCACTGAGGCGGAAATTCTGCACGTGTTCCGCACATCCAAGCTCAC ATTCTTCGCCGAGGAGCTGCCACCGATGGCGGAAAGTCAGGAGCTCAACC AGATCGAGGTGACGTGTCCACTAACCGCCCAGCTGCTGATGATCTACTAC CTCATGTTGTACGAGGATACGCGACTGATGAACCTCAGCGCTTTGGGTGG TCGCAAGCAGAAGGAGTACTCCAACAACTTCCTGGGCGGACTGCCACTGA AGTATCTGCTCCAGAAGGCGCACCACTACCACAACGACTATCTCTCGCTC TTCCATCCGCTGCTGCGTTTGATTATCTCCAACTATCCGCATCTCAGCAT GGTCGATGACTGGCTGGAGGAGCACAATCTGGCCCAGGGCAATTCCACGG TGGTGGTAAGCAAGCATGAGCTCAAGCCGGAGACCCTGGATCGTGCACTG GCCGCCATCCAAACGAAACCGCATCTAGCCATCCGCGTGTTTAAGCAGCT ACTCCAGATGCCCCCAGAAACGCAGGCGCAGTATGGACAACAGCTGGTGA AGCATCTGCCGATGGTGTTTGCCAAGTCGGTGCCGCGATACGTCAAGGAT CTGTACAACGATATTTGGCTGCGCCTGAATGCCGTGCTGCCCACCACCCT GTGGATCATGTCGCTGCGAGCGATTACCAACGGCTCGGATACGATGGATC GACGTACCTTTGCCAACGAGAGTCTTCTGGAGCCCATGGAGGTGCTAAGT TGTCCACGCTTCGTATTCTGTTCGCCCTATTTGCTGATGATCCTGCTGCG CATTCTGAAGGGCAGCCTAGCCGCCTCGAAGACCTATCTCAACGTGCACA TGCAGATGCAGCAGAAGCAGGTGCTGGACAAGAATGGCATGATGCAGACG GATGCGATTTGGGAGGACCTAAGGACCACGCTGATTGCCTCGCAGGAGAG CGCCGCCGTGCACATTCTGCTGGAGGTGCTGGACTACATAGCCAGCAAGG CAACGGATCGGGTGTCGCATCTGGAGCTGCGTGAGATACAGGGCATCATT GGCACCTATGTGCATCAGGCATTCATTTCGGAGCCTTCGCTGGCGAAACT AGTGCACTTCCAAACGTATCCAAAGTCGGTTATTCCCATGATGGTGGCCA GTGTGCCATCGATGCACATATGCATTGATTTTGTTCACGAATTCCTCAAC GTGACGGAAATGGAAAAACAGATCTTTACCATCGATCTGACCTCCCATCT GGTGCTCAACTATTCGATACCCAAGAGTCTGGGCGTCTCGAAATTCTGCC TGAATGTAATCCAGACGACGTTGTCCATGCTGACCGCATCGACCAAGTGT AGATTCCTGCGCAATGTGATGCCAGCGATGGTTCGTTTCGTGGAAACGTT TCCCATTCTGGCCGACGACTGCGTCAACATCCTGATGACCACCGGGCGCA TTCTGCATTCGCAGTCATCGCTGGGCATGACCACAATGGAAATGCCACTC ACCGATAGCGACAAGCTCTGCACGTATCGGGATGCCCAGCTGCACATCAT CATGATCGAGGACGCGTTTAAGGCACTGGTCACGGCGGTCATGAAAAAAT CGGACCTGTATTAGTTGGACTCGATCCCGCCTTGTTTTTCATAGTCGTAA GCAACCTTTCCCCACTCCGCCCCCCGGCTGATTATAATAGTGCTTGTAAA ATTTATAACAACATTGACCAGAATAAATACTTATTGCAAAAACCAAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8211-RA | 3708 | CG8211-RA | 8..3693 | 10..3695 | 18430 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 17543142..17544779 | 2699..1062 | 8175 | 99.9 | Minus |
chrX | 22417052 | chrX | 17545103..17546155 | 1062..10 | 5220 | 99.7 | Minus |
chrX | 22417052 | chrX | 17542081..17543077 | 3694..2698 | 4985 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 17653822..17655459 | 2699..1062 | 8190 | 100 | Minus |
X | 23542271 | X | 17655783..17656835 | 1062..10 | 5265 | 100 | Minus |
X | 23542271 | X | 17652760..17653757 | 3695..2698 | 4990 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 17661920..17663557 | 2699..1062 | 8190 | 100 | Minus |
X | 23527363 | X | 17663881..17664933 | 1062..10 | 5265 | 100 | Minus |
X | 23527363 | X | 17660858..17661855 | 3695..2698 | 4990 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 17542081..17543075 | 2700..3694 | 100 | <- | Minus |
chrX | 17543142..17544778 | 1063..2699 | 99 | <- | Minus |
chrX | 17545103..17546160 | 2..1062 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8211-RA | 1..3318 | 247..3564 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8211-RA | 1..3318 | 247..3564 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
IntS2-RA | 1..3318 | 247..3564 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8211-RA | 1..3318 | 247..3564 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
IntS2-RA | 1..3318 | 247..3564 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8211-RA | 1..3661 | 27..3687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8211-RA | 1..3661 | 27..3687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
IntS2-RA | 1..3668 | 27..3694 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8211-RA | 1..3661 | 27..3687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
IntS2-RA | 1..3668 | 27..3694 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17652761..17653755 | 2700..3694 | 100 | <- | Minus |
X | 17653822..17655458 | 1063..2699 | 100 | <- | Minus |
X | 17655783..17656840 | 2..1062 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17652761..17653755 | 2700..3694 | 100 | <- | Minus |
X | 17653822..17655458 | 1063..2699 | 100 | <- | Minus |
X | 17655783..17656840 | 2..1062 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17652761..17653755 | 2700..3694 | 100 | <- | Minus |
X | 17653822..17655458 | 1063..2699 | 100 | <- | Minus |
X | 17655783..17656840 | 2..1062 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 17546794..17547788 | 2700..3694 | 100 | <- | Minus |
arm_X | 17547855..17549491 | 1063..2699 | 100 | <- | Minus |
arm_X | 17549816..17550873 | 2..1062 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17660859..17661853 | 2700..3694 | 100 | <- | Minus |
X | 17661920..17663556 | 1063..2699 | 100 | <- | Minus |
X | 17663881..17664938 | 2..1062 | 99 | Minus |
Translation from 246 to 3563
> LP18465.hyp MPVRMYDVSPRVFCAMQNLDITLLASYPEAEIRPVLPSLVRMSLLSPLDN TESSMESRKEILAVLIGIEVVNSIVSYLQVNYHELENELKKELQARQKSA FFEGQQHEYGLQSGIALGFERADVARKVRVVLSEIFNLQQQVSEQKPAAH SEMLDDGIYLEEVVDILCIALAELPSLLNILELTDALVHVPNGHRIICAL VANFPDCYRDVVSHVIANCDEDGSDGKHRLMLLMGLSEMNPSQALANRSM CVDMLKVPSFMLKLTLKHPEDLIAFLTGLLLGNDQNLRSWFAAYIRSSQK RKGDALNLVRVELLQKVIQTTTNAAELRDFNLQGAVLLRLYCALRGIGGL KFNDDEINALSQLVTSCPQATPSGVRFVTLALCMLIACPSLVSTIPLENK AVEWLQWLIREDAFFCKRPGTSTSLGEMLLLLAIHFHSNQISAISEMVCS TLAMKIPIRPNSTNRIKQLFTQDLFTEQVVALHAVRVPVTPNLNGTILCY LPVHCIQQLLKSRTFLKHKVPIKSWIFKQICSSVRPVHPVMPALVEVFVN TLIIPNPTGKVNIDHMHRPFTEAEILHVFRTSKLTFFAEELPPMAESQEL NQIEVTCPLTAQLLMIYYLMLYEDTRLMNLSALGGRKQKEYSNNFLGGLP LKYLLQKAHHYHNDYLSLFHPLLRLIISNYPHLSMVDDWLEEHNLAQGNS TVVVSKHELKPETLDRALAAIQTKPHLAIRVFKQLLQMPPETQAQYGQQL VKHLPMVFAKSVPRYVKDLYNDIWLRLNAVLPTTLWIMSLRAITNGSDTM DRRTFANESLLEPMEVLSCPRFVFCSPYLLMILLRILKGSLAASKTYLNV HMQMQQKQVLDKNGMMQTDAIWEDLRTTLIASQESAAVHILLEVLDYIAS KATDRVSHLELREIQGIIGTYVHQAFISEPSLAKLVHFQTYPKSVIPMMV ASVPSMHICIDFVHEFLNVTEMEKQIFTIDLTSHLVLNYSIPKSLGVSKF CLNVIQTTLSMLTASTKCRFLRNVMPAMVRFVETFPILADDCVNILMTTG RILHSQSSLGMTTMEMPLTDSDKLCTYRDAQLHIIMIEDAFKALVTAVMK KSDLY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
IntS2-PA | 1105 | CG8211-PA | 1..1105 | 1..1105 | 5646 | 100 | Plus |
Translation from 246 to 3563
> LP18465.pep MPVRMYDVSPRVFCAMQNLDITLLASYPEAEIRPVLPSLVRMSLLSPLDN TESSMESRKEILAVLIGIEVVNSIVSYLQVNYHELENELKKELQARQKSA FFEGQQHEYGLQSGIALGFERADVARKVRVVLSEIFNLQQQVSEQKPAAH SEMLDDGIYLEEVVDILCIALAELPSLLNILELTDALVHVPNGHRIICAL VANFPDCYRDVVSHVIANCDEDGSDGKHRLMLLMGLSEMNPSQALANRSM CVDMLKVPSFMLKLTLKHPEDLIAFLTGLLLGNDQNLRSWFAAYIRSSQK RKGDALNLVRVELLQKVIQTTTNAAELRDFNLQGAVLLRLYCALRGIGGL KFNDDEINALSQLVTSCPQATPSGVRFVTLALCMLIACPSLVSTIPLENK AVEWLQWLIREDAFFCKRPGTSTSLGEMLLLLAIHFHSNQISAISEMVCS TLAMKIPIRPNSTNRIKQLFTQDLFTEQVVALHAVRVPVTPNLNGTILCY LPVHCIQQLLKSRTFLKHKVPIKSWIFKQICSSVRPVHPVMPALVEVFVN TLIIPNPTGKVNIDHMHRPFTEAEILHVFRTSKLTFFAEELPPMAESQEL NQIEVTCPLTAQLLMIYYLMLYEDTRLMNLSALGGRKQKEYSNNFLGGLP LKYLLQKAHHYHNDYLSLFHPLLRLIISNYPHLSMVDDWLEEHNLAQGNS TVVVSKHELKPETLDRALAAIQTKPHLAIRVFKQLLQMPPETQAQYGQQL VKHLPMVFAKSVPRYVKDLYNDIWLRLNAVLPTTLWIMSLRAITNGSDTM DRRTFANESLLEPMEVLSCPRFVFCSPYLLMILLRILKGSLAASKTYLNV HMQMQQKQVLDKNGMMQTDAIWEDLRTTLIASQESAAVHILLEVLDYIAS KATDRVSHLELREIQGIIGTYVHQAFISEPSLAKLVHFQTYPKSVIPMMV ASVPSMHICIDFVHEFLNVTEMEKQIFTIDLTSHLVLNYSIPKSLGVSKF CLNVIQTTLSMLTASTKCRFLRNVMPAMVRFVETFPILADDCVNILMTTG RILHSQSSLGMTTMEMPLTDSDKLCTYRDAQLHIIMIEDAFKALVTAVMK KSDLY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21164-PA | 1104 | GF21164-PA | 1..1104 | 1..1105 | 5452 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18170-PA | 1105 | GG18170-PA | 1..1105 | 1..1105 | 5680 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17593-PA | 1145 | GH17593-PA | 20..1145 | 4..1105 | 4953 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
IntS2-PA | 1105 | CG8211-PA | 1..1105 | 1..1105 | 5646 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16243-PA | 1123 | GI16243-PA | 1..1123 | 1..1105 | 5096 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16006-PA | 1132 | GL16006-PA | 30..1132 | 2..1105 | 5016 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20902-PA | 1132 | GA20902-PA | 30..1132 | 2..1105 | 5016 | 85.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13302-PA | 1105 | GM13302-PA | 1..1105 | 1..1105 | 5858 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17348-PA | 979 | GD17348-PA | 1..682 | 1..682 | 3652 | 99.4 | Plus |
Dsim\GD17348-PA | 979 | GD17348-PA | 687..979 | 813..1105 | 1471 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15935-PA | 1117 | GJ15935-PA | 1..1117 | 1..1105 | 5109 | 86.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16204-PA | 891 | GK16204-PA | 19..875 | 2..853 | 4093 | 88.9 | Plus |
Dwil\GK19239-PA | 208 | GK19239-PA | 1..208 | 898..1105 | 993 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15580-PA | 1105 | GE15580-PA | 1..1105 | 1..1105 | 5725 | 96.4 | Plus |