Clone LP18549 Report

Gene	Date	Evidence
CG4562	2003-01-01	Sim4 clustering to Release 3
CG4562	2008-04-29	Release 5.5 accounting
CG4562	2008-08-15	Release 5.9 accounting
CG4562	2008-12-18	5.12 accounting
CG4562	2011-03-01	Transcript Validation

Clone Sequence Records

LP18549.complete Sequence

4538 bp (4538 high quality bases) assembled on 2005-03-09

GenBank Submission: BT021352

> LP18549.complete
AGAAGCTGCCGCCAGATCCGTCAGGTGTAAAAGTACCTTGTAATCCCATT
ACAGCGGCACCTGTACAGGATACACGTACACCCCGACCAATGACCTGGCA
CCTGAAGCTAGGGAATCGATAGAATTAGACCAAACCGACCAAGATGCAGT
CAATGAAAGCCGATGAACTGCCGGAGAATCCGCGCGAGAAGTCCAACATC
TTCTCATCTTTGATGTTCTGCTTTGCCATGCCCACTTTCTTCAAGGGACG
CAAAAAGACACTGGATGAGAATGATTTGTACCGCGCCTTACAGGAGCACA
GATCAGATCACCTGGGCAGCAAGCTGAGCGCGGCGTGGGAGAAGGAGGTC
GAAAAGAAGCGCAAAAAGAAGAAGACCCCCAGCCTGCTGAAGGCCTCGAT
GAACGTGTTTGGCTGGCGCCTGGCCGGTCTAGGCCTGGTCCTCTTCATCT
TGGAGATCGGTTTCCGAGTCACCCAGCCGCTGTTCCTGGGCGGTCTGGTG
GCCTACTATGCGGACGCGAGCAACCAGGAAGGCGATAACCAGACGAAGGC
ATACCTCTACGCCCTGGGCGTGATCTTGACAAGCGCCTGCAACGTGCTCT
TCATGCATCCCTACATGCTGGGCATGTTCCACATCGGCATGAAGGCCAGA
ATAGCCATGACAAGCATGATATATCGGAAGGCGCTGCGATTGAGTCGAAC
GGCGCTGGGCGATACCACAATTGGTCAGGTGGTCAATCTCATCTCGAACG
ATGTGGGCCGGCTGGACGTTTCGGTCATCCACATGAACTATTTATGGCTG
GGTCCGGTGGAGATTGGCATTATCACGTACCTCATGTACAGGGAGATTGG
TATCTCCGCCTTCTTCGGCGTGGCGGTGATGTTGCTGTTTATACCCCTGC
AAGCCTATCTGGGCAAGAAGACCTCCGTGCTGCGATTGAAAACGGCTCTG
CGGACGGATGAGCGAGTGCGCATGATGAACGAGATCATTTCGGGCATCCA
GGTGATCAAGATGTATGCGTGGGAAATTCCCTTCAGCAAGATGATCAACT
ATGTGCGCACCAAGGAGATGAACGCCATCCGCAATGTGAACTACATCCGA
GGCACGCTGCAAAGCTTCATCATGTTCGTCACGAGGATATCGGTGTTTGT
GAGCTTGGTTGGATTCGTGCTGCTTGGAAAGCTTCTGACCGCCGAGAAGG
CCTTCGTGATCACCGCCTACTACAATATCCTGCGTAACACCATGACCGTC
TACTTCCCCATGGGAATATCCCAGTTTGCCGAACTATTGGTCTCGATCCG
CCGTATCCAGACATTCATGCTGCACGAGGAGACAAAGGTGCGTGACAAGT
CGGAGGACCTGGACGAGCAGAAGCTGGGCAAGGCGGGTCTAATTGCTGAA
CCCACAGTGGCCCAGACCACTGGTGTCCTGAAGCCAAGCAGTCGTCGCAC
CAGCGAAGCGGAGCACAGTATCGTCATAAGCAAGCTAAAGGCCAAATGGG
ATCAGAAGAACACGGACAACACGTTGGATAACATTTCGCTAAAGTTCAAG
CCGCGTCAACTTGTGGCCGTCATTGGACCAGTGGGCTCTGGAAAATCAAG
CTTGATTCAGGCTGTGCTGGGAGAACTGAATCCGGATTCTGGTTCGGTCA
AAGTCAACGGAACTCTCTCGTACGCCTCCCAGGAGCCGTGGCTCTTCACC
GGCACTGTTCGCCAGAACATCCTCTTCGGACTGCCCATGGATAAGCATCG
CTACCGCACTGTGGTCAAAAGGTGTGCCCTGGAGCGGGACTTCGAGCTGT
TGCCCTATGCTGACAAGACTATTGTGGGTGAGAGAGGAGCATCTCTCTCC
GGAGGACAGAAGGCGCGTATAAGTTTGGCCAGAGCTGTTTACCGGAAGGC
TGACATCTACCTGTTGGACGATCCCCTTAGTGCCGTGGATACCCATGTCG
GACGTCATCTGTTCGATCAGTGTATGCGTGGATTCCTGCGCGAGGAAATC
GTACTGCTTGTGACCCATCAACTGCAGTTCCTAGAACAGGCCGACGTTAT
TGTGATCATGGACAAGGGCAAGATCAGCGCTATGGGCACCTACGAGTCCA
TGGCCAAGAGCGGTTTGGACTTCGCCCAAATGCTGACGGATCCCAGCAAG
AAGGATGAGGGTGCCGGTGATGCCCCGGACAAGAAGAGCCTCTCGAGGCA
GAACAGTAAATTGCGCGACCGACACGGTAGCATCTCCTCCATGGAATCTG
CTGCCGAATCCTTGGCGGCGGAGTCACCCATGCAGACGCAGGAAGGTCGC
GTCGAGGGGCGCATAGGAATGAAGCTCTACAAAAAGTACTTTGGAGCGAA
TGGCTACGGACTGTTTATCGTATTTGCGTTCTTCTGCATTGGTGCCCAGG
TGCTGGCCTCTGGTGGTGATATCTTCTTGTCCTACTGGGTGAACAAAAAT
GGTGAAGCTGAGCGTGATACCTTTATGGCCAGATTGAGACGCGCCTTCCC
CGAAACCCGCATCAATGCCGATACCGATCCTGTTGACATCTACTACTTCA
CCGGCATCAATGTGTCTGTGATCATCTTCTCGCTGGTGCGGAGCATGCTC
TTCTTCTACCTGGCAATGCGCAGTTCGACGACCCTGCACAACACCATGTT
CCAAGGTGTGACCCGAGCGGCGATGCATTTCTTCAACACCAATCCCTCCG
GACGCATCCTCAATCGCTTCTCCAAGGACTTGGGTCAAGTGGACGAGATT
CTTCCCTCCGTGATGATGGACGTGATGCAGATCTTCCTCGCAATCGTGGG
CATCGTAGTCGTCCTATGTATCATTAACGTTTGGTACATCCTCGCCACGG
TGTTCCTTGTGATCGTTTTCTACCTCCTGCGCGTCTTCTATCTGAGCACA
TCCCGTGACGTGAAGCGACTCGAAGCTGTCAGTTTATTAAATCAATATAT
TTTATATCAACAGCACGCTCCCCCATTTACTCCCACTTGAGTGCTTCCCT
TAATGGCCTGGCCACCATCCGAGCATTTGGAGCGCAGAAGGAACTGATTG
CCGAATTCGACAACTACCAGGATATGCACAGCTCTGGCTACTATATGTTC
CTTGCCACGAGTCGAGCCTTTGGATACTGGCTCGACTGCGTTTGTGTTGT
CTACATCGCTGTAATCACATTGAGCTTCTTCCTCTTCTCCCCGGAGAACG
GAGGTGACGTCGGTCTTGCTATTACCCAAGCCATGGGCATGACCGGTATG
GTCCAGTGGGGAATGAGACAATCGGCCGAGCTGGAAAACACAATGACGGC
AGTGGAGAGAGTGGTGGAATATGAGGATCTTGAACCGGAGGGTGACTTCG
AATCCAAGCCAAATAAAAAGCCGCCAAAGGATTGGCCAGAGGATGGAAAG
ATCGTGTTCGACGACCTCTCGCTGAAGTACTTCCCCGACAAGGCGGCCGA
CTACGTGCTCCGATCCCTGAACATCGCTATCGAGGGTTGCGAAAAGGTGG
GCATTGTGGGACGAACTGGTGCCGGCAAATCTTCGCTGATCAACGCTCTG
TTCCGTCTGTCCTACAACGAGGGAGCCATCCTGATCGACAGGCGCGACAC
CAACGACCTGGGACTGCACGATCTGCGCAGCAAGATCTCCATTATTCCTC
AGGAACCGGTGCTGTTCTCGGGCACCATGCGTTACAATCTGGATCCCTTC
GACGAGTATAGCGACGCCAAGCTGTGGGAGTCTCTGGAGGAGGTTAAGCT
TAAGCAAGTGGTGGCTGATCTTCCCAGTGGTTTGCAGAGCAAGATATCCG
AAGGCGGCACCAACTTCAGCGTGGGACAGCGACAGCTGGTGTGCCTAGCT
AGGGCCATTCTCCGAGAGAATCGCATTTTGGTGATGGACGAGGCAACGGC
TAACGTCGATCCGCAGACGGATGCTCTTATCCAGACGACGATTAGGAACA
AATTCAAGGACTGCACGGTGCTCACGATTGCCCATCGATTGCATACGGTT
ATGGACTCGGACAAGGTGCTAGTAATGGACGCAGGAAAGGCGGTGGAGTT
CGGATCTCCGTTCGAGCTGCTCACAACCAGCGAGAAGAAGGTCTTCCACA
GCATGGTGAAGCAGACGGGAGACTCCACTTTCGATGCCCTGCTGAAGGTT
GCCCAAAAGGCCCATGATGACAACCTGCGGCTCAAGAAGGATTCTTGACA
TTTCGCCGTTCCGAAGGCTTTTAAAGACTACATACTTAAGATACTGGAAC
CAATTACGAATCATCCGGCGGCCAATGCGGGCATTCAGAAGACCTTCCTC
TTTGCGGAGGCCTCCAAGCAGAAGTTGTTAGGATAGCAAGCCATCAGCGG
CGCCAGCAGACATCCCCACTGAGCTGCCGCTGAGAAACTTTTTACAAGAC
GTGTACAAATCAAAATAATAGTTAGTCAGGTGTATAAAACTAGGAAACTG
ATGAGAAATCAAACAGCAAGACAATAAGCTGATGTTAGAGGAGCGTAGGG
ACTAAATGTTTTTGTACCTTAAAAAAAAAAAAAAAAAA

LP18549.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:46:59

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
CG4562-RB	4534	CG4562-RB	1..4532	1..4532	22645	99.9	Plus
CG4562.a	4718	CG4562.a	70..2946	55..2931	14385	100	Plus
CG4562-RA	4282	CG4562-RA	70..2946	55..2931	14385	100	Plus
CG4562.a	4718	CG4562.a	2947..4143	2964..4160	5985	100	Plus
CG4562-RA	4282	CG4562-RA	2947..4143	2964..4160	5985	100	Plus
CG4562.a	4718	CG4562.a	4207..4581	4158..4532	1860	99.7	Plus
CG4562-RA	4282	CG4562-RA	4207..4282	4158..4233	380	100	Plus
CG4562.a	4718	CG4562.a	33..69	1..37	185	100	Plus
CG4562-RA	4282	CG4562-RA	33..69	1..37	185	100	Plus

Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:35:54

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
chr3R	27901430	chr3R	15693322..15694916	2438..844	7975	100	Minus
chr3R	27901430	chr3R	15691487..15692715	4160..2932	6145	100	Minus
chr3R	27901430	chr3R	15692766..15693262	2933..2437	2485	100	Minus
chr3R	27901430	chr3R	15691061..15691423	4520..4158	1815	100	Minus
chr2L	23010047	chr2L	8355001..8355620	4119..3500	1075	78.2	Minus
chr3R	27901430	chr3R	7400391..7401063	3488..4160	995	76.5	Plus
chr3R	27901430	chr3R	15695485..15695683	664..466	995	100	Minus
chr3R	27901430	chr3R	15698258..15698440	220..38	915	100	Minus
chr3R	27901430	chr3R	15695245..15695426	845..664	910	100	Minus
chr2R	21145070	chr2R	5281940..5282505	3491..4056	880	77	Plus
chr3R	27901430	chr3R	15695755..15695917	466..304	815	100	Minus
chr2L	23010047	chr2L	19000390..19000952	3491..4053	805	76.2	Plus
chr2L	23010047	chr2L	19006022..19006594	3497..4069	750	75.4	Plus
chr2L	23010047	chr2L	19004124..19004617	1572..2068	680	76.3	Plus
chr3R	27901430	chr3R	7398552..7399013	1678..2139	540	74.5	Plus
chr2L	23010047	chr2L	8357207..8357637	2098..1668	475	74	Minus
chr3R	27901430	chr3R	15698114..15698200	306..220	435	100	Minus
chr2L	23010047	chr2L	20930300..20930836	2096..1557	415	72.2	Minus
chr2L	23010047	chr2L	8358059..8358488	1273..844	395	72.8	Minus
chr2R	21145070	chr2R	5279935..5280320	1587..1972	370	73.1	Plus
chr3R	27901430	chr3R	7399932..7400254	3029..3351	325	73.4	Plus
chr2L	23010047	chr2L	8355706..8355887	3414..3233	325	78.6	Minus
chr2L	23010047	chr2L	20928703..20928923	3709..3489	295	75.6	Minus
chr2L	23010047	chr2L	8356413..8356570	2792..2635	280	78.5	Minus
chr3R	27901430	chr3R	7399524..7399724	2589..2789	270	75.6	Plus
chr2L	23010047	chr2L	19003499..19003585	929..1015	255	86.2	Plus
chr2L	23010047	chr2L	19005188..19005343	2634..2789	255	77.6	Plus
chr3R	27901430	chr3R	20360733..20360838	3727..3622	230	81.1	Minus
chr2L	23010047	chr2L	20928289..20928556	4065..3798	230	72.4	Minus
chr3R	27901430	chr3R	7397858..7397953	945..1040	225	82.3	Plus
chr2L	23010047	chr2L	19005737..19005837	3212..3312	220	81.2	Plus
chr2L	23010047	chr2L	20929057..20929202	3355..3210	220	76.7	Minus
chr2L	23010047	chr2L	8355954..8356123	3225..3056	205	74.7	Minus
chr3R	27901430	chr3R	24983838..24983889	973..1024	200	92.3	Plus
chr3R	27901430	chr3R	7397123..7397208	672..757	190	81.4	Plus

Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:57:59 has no hits.

Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:35:52

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
3R	32079331	3R	19869409..19871003	2438..844	7975	100	Minus
3R	32079331	3R	19867574..19868802	4160..2932	6145	100	Minus
3R	32079331	3R	19868853..19869349	2933..2437	2485	100	Minus
3R	32079331	3R	19867136..19867510	4532..4158	1860	99.7	Minus
2L	23513712	2L	8356044..8356704	4160..3500	1055	77.3	Minus
3R	32079331	3R	11574900..11575572	3488..4160	995	76.5	Plus
3R	32079331	3R	19871572..19871770	664..466	995	100	Minus
3R	32079331	3R	19874345..19874527	220..38	915	100	Minus
3R	32079331	3R	19871332..19871513	845..664	910	100	Minus
2R	25286936	2R	9394450..9395015	3491..4056	880	77	Plus
3R	32079331	3R	19871842..19872004	466..304	815	100	Minus
2L	23513712	2L	19001683..19002245	3491..4053	805	76.2	Plus
2L	23513712	2L	19007315..19007887	3497..4069	750	75.4	Plus
2L	23513712	2L	19005417..19005910	1572..2068	680	76.3	Plus
3R	32079331	3R	11573061..11573522	1678..2139	540	74.5	Plus
2L	23513712	2L	8358291..8358721	2098..1668	475	74	Minus
3R	32079331	3R	19874201..19874287	306..220	435	100	Minus
2L	23513712	2L	20931773..20932309	2096..1557	415	72.2	Minus
2L	23513712	2L	8359143..8359572	1273..844	410	73	Minus
2R	25286936	2R	9392529..9392830	1671..1972	370	74.8	Plus
3R	32079331	3R	11574441..11574763	3029..3351	325	73.4	Plus
2L	23513712	2L	8356790..8356971	3414..3233	325	78.6	Minus
2L	23513712	2L	20930176..20930396	3709..3489	295	75.6	Minus
2L	23513712	2L	8357497..8357654	2792..2635	280	78.5	Minus
3R	32079331	3R	11574033..11574233	2589..2789	270	75.6	Plus
2L	23513712	2L	19004792..19004878	929..1015	255	86.2	Plus
2L	23513712	2L	19006481..19006636	2634..2789	255	77.6	Plus
2L	23513712	2L	20929762..20930029	4065..3798	230	72.4	Minus
3R	32079331	3R	11572367..11572462	945..1040	225	82.3	Plus
2L	23513712	2L	19007030..19007130	3212..3312	220	81.2	Plus
2L	23513712	2L	20930530..20930675	3355..3210	220	76.7	Minus
2R	25286936	2R	21286073..21286177	3910..3806	210	80	Minus
2L	23513712	2L	8357038..8357207	3225..3056	205	74.7	Minus
3R	32079331	3R	24537463..24537568	3727..3622	200	79.2	Minus
3R	32079331	3R	29160971..29161022	973..1024	200	92.3	Plus
3R	32079331	3R	11571632..11571717	672..757	190	81.4	Plus

Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:36:35

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
3R	31820162	3R	19610240..19611834	2438..844	7975	100	Minus
3R	31820162	3R	19608405..19609633	4160..2932	6145	100	Minus
3R	31820162	3R	19609684..19610180	2933..2437	2485	100	Minus
3R	31820162	3R	19607967..19608341	4532..4158	1860	99.7	Minus
2L	23513712	2L	8356150..8356704	4054..3500	1050	79.2	Minus
3R	31820162	3R	19612403..19612601	664..466	995	100	Minus
3R	31820162	3R	19615176..19615358	220..38	915	100	Minus
3R	31820162	3R	19612163..19612344	845..664	910	100	Minus
3R	31820162	3R	19612673..19612835	466..304	815	100	Minus
2R	25260384	2R	9395767..9396214	3609..4056	755	77.9	Plus
2L	23513712	2L	19001791..19002245	3599..4053	610	75.6	Plus
3R	31820162	3R	11316026..11316254	3783..4011	500	81.2	Plus
2L	23513712	2L	19007597..19007887	3779..4069	450	76.9	Plus
3R	31820162	3R	19615032..19615118	306..220	435	100	Minus
2L	23513712	2L	19007315..19007520	3497..3702	415	80	Plus
3R	31820162	3R	11313953..11314192	1739..1978	390	77.5	Plus
2L	23513712	2L	8358395..8358616	1994..1773	360	77.4	Minus
3R	31820162	3R	11315863..11315987	3620..3744	355	85.6	Plus
3R	31820162	3R	11315455..11315594	3212..3351	310	81.4	Plus
2L	23513712	2L	20931888..20932051	1981..1818	310	79.2	Minus
2L	23513712	2L	19005516..19005648	1671..1803	305	81.9	Plus
2L	23513712	2L	19005659..19005830	1817..1988	290	77.9	Plus
2L	23513712	2L	19001683..19001766	3491..3574	285	89.2	Plus
2L	23513712	2L	8357497..8357654	2792..2635	280	78.4	Minus
2L	23513712	2L	8359391..8359572	1025..844	280	76.9	Minus
3R	31820162	3R	11314864..11315064	2589..2789	270	75.6	Plus
3R	31820162	3R	11315731..11315816	3488..3573	265	87.2	Plus
2L	23513712	2L	8356865..8356971	3339..3233	265	83.1	Minus
2L	23513712	2L	19004792..19004878	929..1015	255	86.2	Plus
2R	25260384	2R	9393829..9394029	1772..1972	255	75.1	Plus
2L	23513712	2L	20930176..20930265	3709..3620	240	84.4	Minus
2L	23513712	2L	20929762..20930029	4065..3798	230	72.3	Minus
3R	31820162	3R	11313198..11313293	945..1040	225	82.2	Plus
2L	23513712	2L	19007030..19007130	3212..3312	220	81.1	Plus
2L	23513712	2L	19006533..19006636	2686..2789	220	80.7	Plus
2L	23513712	2L	20930530..20930675	3355..3210	220	76.7	Minus
2R	25260384	2R	21287272..21287376	3910..3806	210	80	Minus
2L	23513712	2L	8357038..8357207	3225..3056	205	74.7	Minus
3R	31820162	3R	28901802..28901853	973..1024	200	92.3	Plus
3R	31820162	3R	24278294..24278399	3727..3622	200	79.2	Minus
2L	23513712	2L	20930760..20930835	3128..3053	200	84.2	Minus
3R	31820162	3R	11312463..11312548	672..757	190	81.3	Plus
3R	31820162	3R	11315272..11315387	3029..3144	190	77.5	Plus
3R	31820162	3R	19616000..19616036	37..1	185	100	Minus
2R	25260384	2R	9393728..9393800	1671..1743	185	83.5	Plus
3R	31820162	3R	11310589..11310633	144..188	180	93.3	Plus
2L	23513712	2L	8359143..8359217	1273..1199	180	82.6	Minus
2L	23513712	2L	20931091..20931219	2765..2637	180	75.9	Minus
2R	25260384	2R	9395388..9395483	3230..3325	180	79.1	Plus
2R	25260384	2R	21287466..21287574	3716..3608	170	77	Minus
3R	31820162	3R	24277958..24278020	4011..3949	165	84.1	Minus
3R	31820162	3R	28910852..28910950	3608..3706	165	77.7	Plus
2L	23513712	2L	12738670..12738723	3478..3531	165	87	Plus
2L	23513712	2L	20931773..20931859	2096..2010	165	79.3	Minus
2L	23513712	2L	20930295..20930396	3590..3489	165	77.4	Minus
2L	23513712	2L	19000082..19000167	2013..2098	160	79	Plus
2L	23513712	2L	12743998..12744062	3953..4017	160	83	Plus
2L	23513712	2L	20932764..20932816	1024..972	160	86.7	Minus
2L	23513712	2L	19000809..19000859	2706..2756	150	86.2	Plus
2L	23513712	2L	8358647..8358721	1742..1668	150	80	Minus
3R	31820162	3R	11313417..11313484	1164..1231	145	80.8	Plus
3R	31820162	3R	28908709..28908773	1860..1924	145	81.5	Plus
3R	31820162	3R	28904692..28904783	3615..3706	145	77.1	Plus
3R	31820162	3R	24280250..24280326	1888..1812	145	79.2	Minus
2L	23513712	2L	19006874..19006908	3059..3093	145	94.2	Plus
2L	23513712	2L	19005849..19005910	2007..2068	145	82.2	Plus
2R	25260384	2R	21290175..21290224	1024..975	145	86	Minus
3R	31820162	3R	11313892..11313943	1678..1729	140	84.6	Plus

Blast to na_te.dros performed on 2019-03-16 18:35:52 has no hits.

LP18549.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:36:52 Download gff for LP18549.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
chr3R	15699084..15699120	1..37	100		Minus
chr3R	15691061..15691421	4160..4520	100	<-	Minus
chr3R	15691488..15692715	2932..4159	100	<-	Minus
chr3R	15692768..15693261	2438..2931	100	<-	Minus
chr3R	15693323..15694914	846..2437	100	<-	Minus
chr3R	15695245..15695426	664..845	100	<-	Minus
chr3R	15695486..15695682	467..663	100	<-	Minus
chr3R	15695755..15695914	307..466	100	<-	Minus
chr3R	15698114..15698199	221..306	100	<-	Minus
chr3R	15698258..15698440	38..220	100	<-	Minus

Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:43:31 Download gff for LP18549.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG4562-RB	1..2847	144..2990	100		Plus

Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:16:34 Download gff for LP18549.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG4562-RB	1..2847	144..2990	100		Plus

Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:14:30 Download gff for LP18549.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG4562-RB	1..2847	144..2990	100		Plus

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:00:58 Download gff for LP18549.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG4562-RB	1..2847	144..2990	100		Plus

Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:43:06 Download gff for LP18549.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG4562-RB	1..2847	144..2990	100		Plus

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:15:45 Download gff for LP18549.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG4562-RB	1..4520	1..4520	100		Plus

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:16:34 Download gff for LP18549.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG4562-RB	1..4520	1..4520	100		Plus

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:14:30 Download gff for LP18549.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG4562-RB	20..4539	1..4520	100		Plus

Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:00:58 Download gff for LP18549.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG4562-RB	1..4520	1..4520	100		Plus

Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:43:06 Download gff for LP18549.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG4562-RB	20..4539	1..4520	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:36:52 Download gff for LP18549.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	19875169..19875205	1..37	100		Minus
3R	19867148..19867508	4160..4520	100	<-	Minus
3R	19867575..19868802	2932..4159	100	<-	Minus
3R	19868855..19869348	2438..2931	100	<-	Minus
3R	19869410..19871001	846..2437	100	<-	Minus
3R	19871332..19871513	664..845	100	<-	Minus
3R	19871573..19871769	467..663	100	<-	Minus
3R	19871842..19872001	307..466	100	<-	Minus
3R	19874201..19874286	221..306	100	<-	Minus
3R	19874345..19874527	38..220	100	<-	Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:36:52 Download gff for LP18549.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	19875169..19875205	1..37	100		Minus
3R	19867148..19867508	4160..4520	100	<-	Minus
3R	19867575..19868802	2932..4159	100	<-	Minus
3R	19868855..19869348	2438..2931	100	<-	Minus
3R	19869410..19871001	846..2437	100	<-	Minus
3R	19871332..19871513	664..845	100	<-	Minus
3R	19871573..19871769	467..663	100	<-	Minus
3R	19871842..19872001	307..466	100	<-	Minus
3R	19874201..19874286	221..306	100	<-	Minus
3R	19874345..19874527	38..220	100	<-	Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:36:52 Download gff for LP18549.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	19875169..19875205	1..37	100		Minus
3R	19867148..19867508	4160..4520	100	<-	Minus
3R	19867575..19868802	2932..4159	100	<-	Minus
3R	19868855..19869348	2438..2931	100	<-	Minus
3R	19869410..19871001	846..2437	100	<-	Minus
3R	19871332..19871513	664..845	100	<-	Minus
3R	19871573..19871769	467..663	100	<-	Minus
3R	19871842..19872001	307..466	100	<-	Minus
3R	19874201..19874286	221..306	100	<-	Minus
3R	19874345..19874527	38..220	100	<-	Minus

Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:14:30 Download gff for LP18549.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
arm_3R	15692870..15693230	4160..4520	100	<-	Minus
arm_3R	15693297..15694524	2932..4159	100	<-	Minus
arm_3R	15694577..15695070	2438..2931	100	<-	Minus
arm_3R	15695132..15696723	846..2437	100	<-	Minus
arm_3R	15697054..15697235	664..845	100	<-	Minus
arm_3R	15697295..15697491	467..663	100	<-	Minus
arm_3R	15697564..15697723	307..466	100	<-	Minus
arm_3R	15699923..15700008	221..306	100	<-	Minus
arm_3R	15700067..15700249	38..220	100	<-	Minus
arm_3R	15700891..15700927	1..37	100		Minus

Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:36:36 Download gff for LP18549.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	19607979..19608339	4160..4520	100	<-	Minus
3R	19608406..19609633	2932..4159	100	<-	Minus
3R	19609686..19610179	2438..2931	100	<-	Minus
3R	19610241..19611832	846..2437	100	<-	Minus
3R	19612163..19612344	664..845	100	<-	Minus
3R	19612404..19612600	467..663	100	<-	Minus
3R	19612673..19612832	307..466	100	<-	Minus
3R	19615032..19615117	221..306	100	<-	Minus
3R	19615176..19615358	38..220	100	<-	Minus
3R	19616000..19616036	1..37	100		Minus

LP18549.pep Sequence

Translation from 143 to 2989

> LP18549.pep
MQSMKADELPENPREKSNIFSSLMFCFAMPTFFKGRKKTLDENDLYRALQ
EHRSDHLGSKLSAAWEKEVEKKRKKKKTPSLLKASMNVFGWRLAGLGLVL
FILEIGFRVTQPLFLGGLVAYYADASNQEGDNQTKAYLYALGVILTSACN
VLFMHPYMLGMFHIGMKARIAMTSMIYRKALRLSRTALGDTTIGQVVNLI
SNDVGRLDVSVIHMNYLWLGPVEIGIITYLMYREIGISAFFGVAVMLLFI
PLQAYLGKKTSVLRLKTALRTDERVRMMNEIISGIQVIKMYAWEIPFSKM
INYVRTKEMNAIRNVNYIRGTLQSFIMFVTRISVFVSLVGFVLLGKLLTA
EKAFVITAYYNILRNTMTVYFPMGISQFAELLVSIRRIQTFMLHEETKVR
DKSEDLDEQKLGKAGLIAEPTVAQTTGVLKPSSRRTSEAEHSIVISKLKA
KWDQKNTDNTLDNISLKFKPRQLVAVIGPVGSGKSSLIQAVLGELNPDSG
SVKVNGTLSYASQEPWLFTGTVRQNILFGLPMDKHRYRTVVKRCALERDF
ELLPYADKTIVGERGASLSGGQKARISLARAVYRKADIYLLDDPLSAVDT
HVGRHLFDQCMRGFLREEIVLLVTHQLQFLEQADVIVIMDKGKISAMGTY
ESMAKSGLDFAQMLTDPSKKDEGAGDAPDKKSLSRQNSKLRDRHGSISSM
ESAAESLAAESPMQTQEGRVEGRIGMKLYKKYFGANGYGLFIVFAFFCIG
AQVLASGGDIFLSYWVNKNGEAERDTFMARLRRAFPETRINADTDPVDIY
YFTGINVSVIIFSLVRSMLFFYLAMRSSTTLHNTMFQGVTRAAMHFFNTN
PSGRILNRFSKDLGQVDEILPSVMMDVMQIFLAIVGIVVVLCIINVWYIL
ATVFLVIVFYLLRVFYLSTSRDVKRLEAVSLLNQYILYQQHAPPFTPT*

LP18549.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:17:40

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dana\GF17354-PA	1339	GF17354-PA	1..929	1..930	4567	92.6	Plus
Dana\GF18378-PA	1315	GF18378-PA	1..906	1..930	3008	61.3	Plus
Dana\GF14687-PA	2444	GF14687-PA	1..945	1..930	2900	60.9	Plus
Dana\GF24219-PA	1289	GF24219-PA	1..879	4..930	2763	55.5	Plus
Dana\GF14689-PA	1267	GF14689-PA	1..857	4..930	2360	50.1	Plus
Dana\GF14687-PA	2444	GF14687-PA	1342..2037	233..935	1842	50.8	Plus
Dana\GF14687-PA	2444	GF14687-PA	1901..2404	136..656	241	21.7	Plus
Dana\GF14687-PA	2444	GF14687-PA	823..1317	141..656	235	22.2	Plus
Dana\GF24219-PA	1289	GF24219-PA	705..1252	94..656	227	22.7	Plus
Dana\GF14689-PA	1267	GF14689-PA	623..1230	43..656	221	22.8	Plus
Dana\GF18378-PA	1315	GF18378-PA	754..1273	118..651	218	20.9	Plus
Dana\GF17354-PA	1339	GF17354-PA	820..1287	162..643	196	20.5	Plus

Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:17:41

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dere\GG15808-PA	1340	GG15808-PA	1..930	1..930	4915	98.8	Plus
Dere\GG18233-PA	1316	GG18233-PA	1..907	1..930	3038	61.7	Plus
Dere\GG23453-PA	1355	GG23453-PA	1..945	1..930	2880	60.6	Plus
Dere\GG21535-PA	1292	GG21535-PA	1..884	4..930	2706	55	Plus
Dere\GG21146-PA	1307	GG21146-PA	1..902	4..930	2680	55.7	Plus
Dere\GG21535-PA	1292	GG21535-PA	686..1258	71..657	240	22.8	Plus
Dere\GG21146-PA	1307	GG21146-PA	1046..1275	440..656	234	28.2	Plus
Dere\GG23453-PA	1355	GG23453-PA	823..1312	141..651	233	22	Plus
Dere\GG15808-PA	1340	GG15808-PA	821..1294	162..649	199	20.7	Plus
Dere\GG18233-PA	1316	GG18233-PA	754..1266	118..644	189	20.1	Plus

Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:17:42

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dgri\GH23331-PA	1338	GH23331-PA	1..928	1..930	4037	82.1	Plus
Dgri\GH17328-PA	1325	GH17328-PA	1..916	1..930	3085	62.3	Plus
Dgri\GH23071-PA	1323	GH23071-PA	1..914	1..930	2897	58.9	Plus
Dgri\GH17329-PA	1318	GH17329-PA	1..909	1..930	2853	57.9	Plus
Dgri\GH10886-PA	1370	GH10886-PA	1..959	1..930	2768	57.7	Plus
Dgri\GH23331-PA	1338	GH23331-PA	692..1292	53..649	223	20.2	Plus
Dgri\GH17329-PA	1318	GH17329-PA	1074..1281	461..656	211	27.6	Plus
Dgri\GH17328-PA	1325	GH17328-PA	1081..1288	461..656	210	27.6	Plus
Dgri\GH23071-PA	1323	GH23071-PA	1053..1286	436..656	205	26.7	Plus
Dgri\GH10886-PA	1370	GH10886-PA	850..1323	162..649	205	22.2	Plus

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:37:10

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
CG4562-PD	948	CG4562-PD	1..948	1..948	4800	100	Plus
CG4562-PB	948	CG4562-PB	1..948	1..948	4800	100	Plus
CG4562-PE	1408	CG4562-PE	1..930	1..930	4697	99.9	Plus
CG4562-PC	1362	CG4562-PC	1..930	1..930	4697	99.9	Plus
CG4562-PA	1362	CG4562-PA	1..930	1..930	4697	99.9	Plus
Mrp4-PB	1316	CG14709-PB	1..907	1..930	2876	61.4	Plus
CG7627-PB	1355	CG7627-PB	1..945	1..930	2800	60.3	Plus
CG7627-PA	1355	CG7627-PA	1..945	1..930	2800	60.3	Plus
CG31793-PA	1307	CG31793-PA	1..907	4..935	2601	55.6	Plus
CG9270-PC	1292	CG9270-PC	1..889	4..935	2584	54.9	Plus
CG31793-PC	1213	CG31793-PC	3..813	97..935	2362	56.3	Plus
CG31792-PC	1323	CG31792-PC	1..909	1..928	2321	51.9	Plus
CG31792-PB	1323	CG31792-PB	1..909	1..928	2321	51.9	Plus
l(2)03659-PC	1374	CG8799-PC	79..971	2..930	2197	49.7	Plus
l(2)03659-PB	1374	CG8799-PB	79..971	2..930	2197	49.7	Plus
rdog-PA	1374	CG11897-PA	11..951	10..930	1681	38.9	Plus
rdog-PB	1374	CG11897-PB	11..951	10..930	1681	38.9	Plus
CG10505-PA	1312	CG10505-PA	14..900	12..930	1545	37.5	Plus
CG11898-PB	1320	CG11898-PB	11..895	12..930	1498	35.9	Plus
CG5789-PB	1402	CG5789-PB	215..992	138..929	1465	40.6	Plus
CG5789-PA	1402	CG5789-PA	215..992	138..929	1465	40.6	Plus
MRP-PK	1548	CG6214-PK	310..1163	66..930	1100	31.8	Plus
MRP-PN	1548	CG6214-PN	310..1163	66..930	1099	31.4	Plus
MRP-PM	1548	CG6214-PM	310..1163	66..930	1097	31.6	Plus
MRP-PI	1549	CG6214-PI	310..1164	66..930	1092	31.6	Plus
MRP-PR	1492	CG6214-PR	310..1163	66..930	1089	31.5	Plus
MRP-PJ	1548	CG6214-PJ	310..1163	66..930	1089	31.5	Plus
MRP-PF	1548	CG6214-PF	310..1163	66..930	1085	31.5	Plus
MRP-PB	1548	CG6214-PB	310..1163	66..930	1085	31	Plus
MRP-PE	1548	CG6214-PE	310..1163	66..930	1084	31.1	Plus
MRP-PH	1548	CG6214-PH	310..1163	66..930	1082	31.3	Plus
MRP-PO	1549	CG6214-PO	310..1164	66..930	1077	31.2	Plus
MRP-PA	1549	CG6214-PA	310..1164	66..930	1077	31.2	Plus
MRP-PL	1548	CG6214-PL	310..1163	66..930	1075	31.1	Plus
MRP-PD	1548	CG6214-PD	310..1163	66..930	1074	31.2	Plus
MRP-PC	1548	CG6214-PC	310..1163	66..930	1070	30.6	Plus
MRP-PQ	1548	CG6214-PQ	310..1163	66..930	1060	31.1	Plus
MRP-PG	1548	CG6214-PG	310..1163	66..930	1060	30.8	Plus
MRP-PP	1548	CG6214-PP	310..1163	66..930	1045	30.8	Plus
CG7806-PA	1487	CG7806-PA	227..1099	14..935	769	27.8	Plus
Sur-PC	2223	CG5772-PC	868..1050	472..650	400	42.1	Plus
Mdr50-PA	1313	CG8523-PA	422..911	434..913	300	23.1	Plus
CG1824-PA	761	CG1824-PA	97..743	58..709	289	22.2	Plus
Mdr50-PA	1313	CG8523-PA	713..1301	66..658	274	21.8	Plus
CG3156-PA	692	CG3156-PA	463..671	461..653	270	31.4	Plus
Mdr49-PB	1101	CG3879-PB	219..469	461..692	269	31.3	Plus
Mdr49-PA	1302	CG3879-PA	420..670	461..692	269	31.3	Plus
CG10226-PB	1206	CG10226-PB	954..1194	435..658	252	27.7	Plus
CG10226-PA	1320	CG10226-PA	1068..1308	435..658	252	27.7	Plus
CG31792-PC	1323	CG31792-PC	766..1275	121..649	250	24.2	Plus
CG31792-PB	1323	CG31792-PB	766..1275	121..649	250	24.2	Plus
Mdr65-PA	1302	CG10181-PA	426..682	464..719	244	26.9	Plus
l(2)03659-PC	1374	CG8799-PC	786..1343	94..656	243	22.8	Plus
l(2)03659-PB	1374	CG8799-PB	786..1343	94..656	243	22.8	Plus
Mdr65-PA	1302	CG10181-PA	1035..1295	419..663	243	25.7	Plus
Mdr49-PB	1101	CG3879-PB	853..1083	438..653	240	29.2	Plus
Mdr49-PA	1302	CG3879-PA	1054..1284	438..653	240	29.2	Plus
CG7627-PB	1355	CG7627-PB	823..1309	141..649	239	22	Plus
CG7627-PA	1355	CG7627-PA	823..1309	141..649	239	22	Plus
CG10226-PB	1206	CG10226-PB	318..541	461..671	239	30.7	Plus
CG10226-PA	1320	CG10226-PA	432..655	461..671	239	30.7	Plus
CG9270-PC	1292	CG9270-PC	686..1257	71..656	235	21.6	Plus
rdog-PA	1374	CG11897-PA	812..1352	128..686	232	22.5	Plus
rdog-PB	1374	CG11897-PB	812..1352	128..686	232	22.5	Plus
CG31793-PA	1307	CG31793-PA	689..1275	62..656	226	22.4	Plus
CG31793-PC	1213	CG31793-PC	595..1181	62..656	226	22.4	Plus
ABCB7-PB	709	CG7955-PB	445..682	453..663	226	25.5	Plus
ABCB7-PA	743	CG7955-PA	479..716	453..663	226	25.5	Plus
Sur-PC	2223	CG5772-PC	226..690	17..396	219	23.1	Plus
CG5789-PB	1402	CG5789-PB	850..1342	126..642	217	23.7	Plus
CG5789-PA	1402	CG5789-PA	850..1342	126..642	217	23.7	Plus
CG4562-PE	1408	CG4562-PE	821..1294	162..649	213	20.5	Plus
CG4562-PC	1362	CG4562-PC	821..1294	162..649	213	20.5	Plus
CG4562-PA	1362	CG4562-PA	821..1294	162..649	213	20.5	Plus
Sur-PC	2223	CG5772-PC	1434..1653	701..927	213	26.4	Plus
MRP-PK	1548	CG6214-PK	937..1521	47..644	211	21.5	Plus
MRP-PF	1548	CG6214-PF	937..1521	47..644	211	21.5	Plus
MRP-PM	1548	CG6214-PM	937..1521	47..644	210	21.4	Plus
MRP-PH	1548	CG6214-PH	937..1521	47..644	210	21.4	Plus
MRP-PN	1548	CG6214-PN	937..1521	47..644	206	21.7	Plus
MRP-PJ	1548	CG6214-PJ	937..1521	47..644	206	21.1	Plus
MRP-PE	1548	CG6214-PE	937..1521	47..644	206	21.7	Plus
MRP-PD	1548	CG6214-PD	937..1521	47..644	206	21.1	Plus
MRP-PB	1548	CG6214-PB	937..1521	47..644	205	21.3	Plus
MRP-PC	1548	CG6214-PC	937..1521	47..644	205	21.3	Plus
MRP-PL	1548	CG6214-PL	937..1521	47..644	203	20.9	Plus
MRP-PG	1548	CG6214-PG	937..1521	47..644	203	20.9	Plus
Mrp4-PB	1316	CG14709-PB	772..1279	131..656	195	19.6	Plus
CG7806-PA	1487	CG7806-PA	954..1462	129..654	195	21.2	Plus
CG10505-PA	1312	CG10505-PA	721..1262	93..648	193	19.2	Plus
MRP-PQ	1548	CG6214-PQ	937..1521	47..644	192	20.4	Plus
MRP-PP	1548	CG6214-PP	937..1521	47..644	192	20.4	Plus
MRP-PI	1549	CG6214-PI	1320..1522	454..644	190	26.8	Plus
MRP-PO	1549	CG6214-PO	1320..1522	454..644	190	26.8	Plus
MRP-PA	1549	CG6214-PA	1320..1522	454..644	190	26.8	Plus
CG5789-PB	1402	CG5789-PB	10..101	11..102	175	38	Plus
CG5789-PA	1402	CG5789-PA	10..101	11..102	175	38	Plus
Sur-PC	2223	CG5772-PC	1997..2195	459..644	171	26.2	Plus

Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:17:43

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dmoj\GI10329-PA	1337	GI10329-PA	1..927	1..930	4069	83.3	Plus
Dmoj\GI10292-PA	1330	GI10292-PA	1..921	1..930	3073	62	Plus
Dmoj\GI10294-PA	1324	GI10294-PA	1..915	1..930	2938	58.9	Plus
Dmoj\GI13019-PA	2297	GI13019-PA	1..963	1..930	2880	58.4	Plus
Dmoj\GI10293-PA	1279	GI10293-PA	2..878	33..930	2718	57.3	Plus
Dmoj\GI13019-PA	2297	GI13019-PA	1013..1896	27..930	2595	53.8	Plus
Dmoj\GI13019-PA	2297	GI13019-PA	2061..2268	461..656	223	29	Plus
Dmoj\GI10292-PA	1330	GI10292-PA	1086..1288	461..651	211	27.8	Plus
Dmoj\GI10293-PA	1279	GI10293-PA	706..1242	90..649	204	20.1	Plus
Dmoj\GI10329-PA	1337	GI10329-PA	788..1285	127..643	202	20.2	Plus
Dmoj\GI10294-PA	1324	GI10294-PA	738..1287	90..656	202	19.7	Plus

Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:17:43

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dper\GL12416-PA	1216	GL12416-PA	1..767	1..765	3718	92.3	Plus
Dper\GL12397-PA	1312	GL12397-PA	1..903	1..930	3050	61.5	Plus
Dper\GL18906-PA	1367	GL18906-PA	1..954	1..930	2904	59.7	Plus
Dper\GL25879-PA	1289	GL25879-PA	1..879	4..930	2743	55.7	Plus
Dper\GL18908-PA	1269	GL18908-PA	1..864	4..930	2553	53.7	Plus
Dper\GL25879-PA	1289	GL25879-PA	705..1244	94..649	235	22	Plus
Dper\GL18908-PA	1269	GL18908-PA	979..1237	408..656	227	27.4	Plus
Dper\GL18906-PA	1367	GL18906-PA	832..1322	141..651	217	21.9	Plus
Dper\GL12397-PA	1312	GL12397-PA	750..1276	113..657	216	20.1	Plus

Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:17:44

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dpse\GA18260-PB	1336	GA18260-PB	1..932	1..930	4559	92.4	Plus
Dpse\GA27495-PA	1312	GA27495-PA	1..903	1..930	3055	61.5	Plus
Dpse\GA25855-PA	1367	GA25855-PA	1..954	1..930	2904	59.7	Plus
Dpse\GA21660-PA	1289	GA21660-PA	1..879	4..930	2745	55.7	Plus
Dpse\GA16480-PA	1307	GA16480-PA	1..902	4..930	2719	55.8	Plus
Dpse\GA21660-PA	1289	GA21660-PA	1011..1244	431..649	234	27.2	Plus
Dpse\GA16480-PA	1307	GA16480-PA	1017..1275	408..656	228	27.4	Plus
Dpse\GA25855-PA	1367	GA25855-PA	832..1322	141..651	217	21.9	Plus
Dpse\GA27495-PA	1312	GA27495-PA	750..1276	113..657	216	20.1	Plus
Dpse\GA18260-PB	1336	GA18260-PB	823..1296	162..649	211	21.2	Plus

Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:17:45

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsec\GM26890-PA	1340	GM26890-PA	1..930	1..930	4932	99.4	Plus
Dsec\GM23953-PA	1049	GM23953-PA	1..907	1..930	2994	61	Plus
Dsec\GM13023-PA	1355	GM13023-PA	1..945	1..930	2874	60.1	Plus
Dsec\GM17308-PA	1307	GM17308-PA	1..902	4..930	2647	55	Plus
Dsec\GM17307-PA	1323	GM17307-PA	1..909	1..928	2424	52.1	Plus
Dsec\GM17307-PA	1323	GM17307-PA	1072..1275	457..649	236	31.6	Plus
Dsec\GM13023-PA	1355	GM13023-PA	823..1312	141..651	232	22.4	Plus
Dsec\GM17308-PA	1307	GM17308-PA	728..1275	94..656	216	22.5	Plus
Dsec\GM26890-PA	1340	GM26890-PA	821..1294	162..649	197	20.7	Plus

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:17:46

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsim\GD20097-PA	1340	GD20097-PA	1..930	1..930	4941	99.5	Plus
Dsim\GD21664-PA	1276	GD21664-PA	3..868	23..930	2617	54.3	Plus
Dsim\GD24170-PA	2466	GD24170-PA	1..909	1..928	2443	52.7	Plus
Dsim\GD10651-PA	1374	GD10651-PA	76..965	2..930	2328	50.6	Plus
Dsim\GD24170-PA	2466	GD24170-PA	1409..2054	260..930	1995	58.1	Plus
Dsim\GD21421-PA	1374	GD21421-PA	11..951	10..930	1721	38.2	Plus
Dsim\GD24170-PA	2466	GD24170-PA	1298..1414	3..115	273	47.9	Plus
Dsim\GD24170-PA	2466	GD24170-PA	766..1305	121..691	245	24.8	Plus
Dsim\GD21664-PA	1276	GD21664-PA	1030..1241	457..656	231	29.3	Plus
Dsim\GD10651-PA	1374	GD10651-PA	735..1337	41..656	231	22.2	Plus
Dsim\GD21421-PA	1374	GD21421-PA	812..1352	128..686	231	22	Plus
Dsim\GD24170-PA	2466	GD24170-PA	2198..2427	440..656	215	27.4	Plus
Dsim\GD20097-PA	1340	GD20097-PA	821..1294	162..649	197	20.7	Plus

Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:17:47

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\GJ10184-PA	1339	GJ10184-PA	1..929	1..930	4076	82.9	Plus
Dvir\GJ11099-PA	1432	GJ11099-PA	1..921	1..930	3104	62.4	Plus
Dvir\GJ11101-PA	1325	GJ11101-PA	1..916	1..930	2945	58.9	Plus
Dvir\GJ11549-PA	1349	GJ11549-PA	1..949	1..930	2850	59.4	Plus
Dvir\GJ11560-PA	1315	GJ11560-PA	1..900	4..930	2712	54.6	Plus
Dvir\GJ11549-PA	1349	GJ11549-PA	1110..1316	457..651	215	29.2	Plus
Dvir\GJ11101-PA	1325	GJ11101-PA	1081..1283	461..651	212	28.3	Plus
Dvir\GJ11560-PA	1315	GJ11560-PA	1046..1272	443..656	212	27.3	Plus
Dvir\GJ11099-PA	1432	GJ11099-PA	1086..1288	461..651	201	28.6	Plus
Dvir\GJ10184-PA	1339	GJ10184-PA	681..1287	41..643	199	20	Plus

Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:17:47

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dwil\GK22360-PA	1369	GK22360-PA	1..930	1..930	4415	89.6	Plus
Dwil\GK11301-PA	1326	GK11301-PA	1..917	1..930	3023	62.1	Plus
Dwil\GK24852-PA	1374	GK24852-PA	1..962	1..930	2877	58.9	Plus
Dwil\GK24719-PA	1306	GK24719-PA	1..896	4..930	2716	56.9	Plus
Dwil\GK24853-PA	1317	GK24853-PA	1..907	4..928	2709	55	Plus
Dwil\GK24853-PA	1317	GK24853-PA	735..1274	94..649	232	23	Plus
Dwil\GK24719-PA	1306	GK24719-PA	1059..1256	458..644	229	27.5	Plus
Dwil\GK24852-PA	1374	GK24852-PA	853..1329	162..651	222	22	Plus
Dwil\GK11301-PA	1326	GK11301-PA	1082..1289	461..656	215	28.2	Plus
Dwil\GK22360-PA	1369	GK22360-PA	821..1294	162..649	213	20.5	Plus

Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:17:48

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dyak\GE25109-PA	1340	GE25109-PA	1..930	1..930	4905	98.6	Plus
Dyak\GE24181-PA	1316	GE24181-PA	1..907	1..930	3026	61.6	Plus
Dyak\GE11040-PA	1355	GE11040-PA	1..945	1..930	2833	60.3	Plus
Dyak\GE13012-PA	1292	GE13012-PA	1..884	4..930	2671	53.8	Plus
Dyak\GE13220-PA	1307	GE13220-PA	1..902	4..930	2650	55.3	Plus
Dyak\GE13012-PA	1292	GE13012-PA	710..1258	94..657	243	24.5	Plus
Dyak\GE11040-PA	1355	GE11040-PA	823..1312	141..651	237	22.4	Plus
Dyak\GE13220-PA	1307	GE13220-PA	1063..1275	456..656	211	27.2	Plus
Dyak\GE25109-PA	1340	GE25109-PA	821..1294	162..649	199	20.8	Plus
Dyak\GE24181-PA	1316	GE24181-PA	754..1274	118..651	196	19.8	Plus

LP18549.hyp Sequence

Translation from 143 to 2989

> LP18549.hyp
MQSMKADELPENPREKSNIFSSLMFCFAMPTFFKGRKKTLDENDLYRALQ
EHRSDHLGSKLSAAWEKEVEKKRKKKKTPSLLKASMNVFGWRLAGLGLVL
FILEIGFRVTQPLFLGGLVAYYADASNQEGDNQTKAYLYALGVILTSACN
VLFMHPYMLGMFHIGMKARIAMTSMIYRKALRLSRTALGDTTIGQVVNLI
SNDVGRLDVSVIHMNYLWLGPVEIGIITYLMYREIGISAFFGVAVMLLFI
PLQAYLGKKTSVLRLKTALRTDERVRMMNEIISGIQVIKMYAWEIPFSKM
INYVRTKEMNAIRNVNYIRGTLQSFIMFVTRISVFVSLVGFVLLGKLLTA
EKAFVITAYYNILRNTMTVYFPMGISQFAELLVSIRRIQTFMLHEETKVR
DKSEDLDEQKLGKAGLIAEPTVAQTTGVLKPSSRRTSEAEHSIVISKLKA
KWDQKNTDNTLDNISLKFKPRQLVAVIGPVGSGKSSLIQAVLGELNPDSG
SVKVNGTLSYASQEPWLFTGTVRQNILFGLPMDKHRYRTVVKRCALERDF
ELLPYADKTIVGERGASLSGGQKARISLARAVYRKADIYLLDDPLSAVDT
HVGRHLFDQCMRGFLREEIVLLVTHQLQFLEQADVIVIMDKGKISAMGTY
ESMAKSGLDFAQMLTDPSKKDEGAGDAPDKKSLSRQNSKLRDRHGSISSM
ESAAESLAAESPMQTQEGRVEGRIGMKLYKKYFGANGYGLFIVFAFFCIG
AQVLASGGDIFLSYWVNKNGEAERDTFMARLRRAFPETRINADTDPVDIY
YFTGINVSVIIFSLVRSMLFFYLAMRSSTTLHNTMFQGVTRAAMHFFNTN
PSGRILNRFSKDLGQVDEILPSVMMDVMQIFLAIVGIVVVLCIINVWYIL
ATVFLVIVFYLLRVFYLSTSRDVKRLEAVSLLNQYILYQQHAPPFTPT*

LP18549.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:04:02

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
CG4562-PD	948	CG4562-PD	1..948	1..948	4800	100	Plus
CG4562-PB	948	CG4562-PB	1..948	1..948	4800	100	Plus
CG4562-PE	1408	CG4562-PE	1..930	1..930	4697	99.9	Plus
CG4562-PC	1362	CG4562-PC	1..930	1..930	4697	99.9	Plus
CG4562-PA	1362	CG4562-PA	1..930	1..930	4697	99.9	Plus
CG4562-PE	1408	CG4562-PE	821..1294	162..649	213	20.5	Plus
CG4562-PC	1362	CG4562-PC	821..1294	162..649	213	20.5	Plus

Library:	LP
Tissue Source:	Drosophila melanogaster larval-early pupal
Created by:	Ling Hong
Date Registered:	1998-06-11
Comments:	Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:	185
Well:	49
Vector:	pOT2
Associated Gene/Transcript	CG4562-RB
Protein status:	LP18549.pep: gold
Sequenced Size:	4538

Clone LP18549 Report

Clone and Library Details

Associated Genes

Clone Sequence Records

LP18549.complete Sequence

LP18549.complete Blast Records

LP18549.complete Sim4 Records

LP18549.pep Sequence

LP18549.pep Blast Records

LP18549.hyp Sequence

LP18549.hyp Blast Records