BDGP Sequence Production Resources |
Search the DGRC for LP19442
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 194 |
Well: | 42 |
Vector: | pOT2 |
Associated Gene/Transcript | e-RA |
Protein status: | LP19442.pep: gold |
Sequenced Size: | 3141 |
Gene | Date | Evidence |
---|---|---|
CG3331 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3331 | 2004-10-02 | Blastp of sequenced clone |
e | 2008-04-29 | Release 5.5 accounting |
e | 2008-08-15 | Release 5.9 accounting |
e | 2008-12-18 | 5.12 accounting |
3141 bp (3141 high quality bases) assembled on 2004-10-02
GenBank Submission: BT016047
> LP19442.complete CCGTTTACAAGTACATAGCACGTTGAGTTTCCCGAGTGCGTTGCAAGTTT TTTGGGTGCCCCCCAAAATCAAAGTGAAACGCTAAGTGAAGTGACCAGAA AAAGAAGTTTAAAGCTGGTAGACTCACTCTCTCATAGTTGAAAATATAGA AGGAAAATCAAATTCAAGAAAAACGTGCTTAGTGTGAAACGGCCACAGAT AAACATTTGAAAAAGGAAATCAAGAACCTGTTCAAAAAATCCAGTGTCAG AATTTGTTATTACCCACGTTAATATATCTTCAAGATGGGTTCGCTGCCAC AATTGTCGATCGTCAAGGGTCTGCAGCAAGACTTCGTGCCTAGAGCTCTG CACCGCATCTTCGAGGAGCAGCAGCTGCGGCATGCCGACAAGGTGGCTCT GATCTATCAGCCCAGCACTACGGGCCAGGGAATGGCGCCCAGTCAGAGCA GCTACCGCCAGATGAACGAGCGTGCGAACCGGGCAGCCCGCCTCCTGGTG GCCGAGACCCACGGCCGGTTCCTGCAGCCAAACAGCGATGGTGACTTCAT CGTGGCTGTGTGCATGCAGCCGTCGGAGGGATTGGTCACCACACTGCTGG CCATCTGGAAGGCTGGCGGCGCGTATTTGCCCATCGATCCCAGCTTCCCG GCGAACCGCATTCACCACATACTGCTGGAGGCGAAGCCCACCTTGGTGAT TCGCGACGATGACATCGACGCCGGCCGTTTCCAGGGAACTCCCACGTTAT CCACCACCGAACTGTATGCCAAATCCCTCCAGCTGGCCGGCTCCAATCTG CTCTCAGAGGAGATGCTGCGCGGTGGCAACGACCACATCGCCATCGTGCT CTACACCTCGGGCAGTACGGGTGTGCCCAAGGGAGTGCGTCTGCCGCACG AGAGCATCCTCAATCGGCTCCAGTGGCAGTGGGCGACCTTTCCGTACACC GCCAACGAGGCGGTGAGCGTTTTCAAGACGGCCCTAACCTTCGTGGACTC GATTGCGGAGCTATGGGGCCCGTTAATGTGTGGCCTGGCCATTCTGGTGG TGCCCAAGGCAGTGACCAAGGATCCCCAGCGATTGGTGGCCCTGTTGGAG CGTTATAAGATCAGGCGTCTCGTACTGGTGCCCACCCTTCTGCGCTCGTT GCTCATGTATCTGAAGATGGAGGGAGGCGGAGCTGCTCAGAAACTGCTGT ACAATCTCCAGATTTGGGTCTGCTCCGGAGAACCCCTATCCGTTTCCCTG GCCAGCAGCTTCTTCGACTATTTCGATGAGGGCGTGCACCGGCTGTACAA CTTTTACGGATCCACGGAGGTATTGGGCGATGTCACCTACTTTGCGTGCG AGAGCAAGAAGCAACTGAGTTTGTACGATAATGTGCCCATAGGCATTCCA CTGTCGAATACCGTGGTCTATTTGTTGGATGCCGACTATCGTCCGGTGAA GAACGGCGAGATTGGGGAGATCTTTGCTTCGGGTCTCAACTTGGCCGCTG GTTATGTTAACGGACGCGATCCGGAGAGGTTCTTGGAGAATCCTTTAGCT GTGGAGAAGAAATACGCCCGTTTGTATCGCACTGGAGACTATGGATCCCT GAAGAACGGCAGCATCATGTACGAGGGACGCACCGACTCTCAGGTGAAGA TCCGTGGACATCGCGTCGACCTGTCCGAAGTGGAGAAGAACGTGGCCGAG CTGCCGCTGGTGGATAAGGCCATTGTTCTGTGCTACCATGCTGGTCAGGT GGATCAGGCTATTCTGGCCTTCGTCAAGCTGCGCGATGATGCCCCCATGG TCACCGAGATGCAGATGGAGGCTCGTCTCAAGGACAAGCTAGCCGATTAC ATGACGCCGCAGGTGGTCATCCTGGAGCACGTTCCATTGCTGGTCAACGG CAAGGTGGATCGCCAGGCGCTGCTCAAAACCTATGAGACGGCCAATAACA ACGAAGGTGACTCCAGTATCGTTCTGGACTTTGACTACTCGCAGGTTCCT GAGGATCTAAAGCTAACGGCACGGGATCTCTTCGAGACAGTGGGCGGCGT GATTGGACGCTCCACCAGAGCAACCCTCGCTCCGCACAGTAACTTCTATG AGCTGGGCGGCAACTCGTTGAATTCCATTTTCACGGTGACGCTGCTGCGC GAGAAGGGCTACAACATCGGCATTTCCGAATTCATTGCGGCCAAGAATCT GGGCGAGATCATCGAGAAGATGGCGGCCAACCATGATGCAGTGCAGCTAG AGGAGGAATCCTTGAATGCTTGTCCGCATCTGAAGATGGAGGCGGTGCCG CTACGCCTGGAGCACCGCCAGGAAGTCATCGACATTATTGTGGCTAGCTT CTATAACAAGGCCGACCTGGAGCAGTGGCTCAAGCCCGGAGTTTTGAGAA CCGACTACAGCGATATACTGAACGATATCTGGAATGTGCTGGTGGAGCGG GACCTAAGTTTCGTGGTCTACGATACCAACACGGATCGCATTATTGGCAC AGCGTTGAACTTTGATGCGCGCAACGAGCCCGAGGTGGACATCAAGTCCA AGCTACTCATTGTCTTCGAGTTTCTGGAGTTTTGCGAGGGTCCCATCAGG GATAACTACCTGCCCAAGGGTCTCAACCAAATCCTGCACTCGTTCATGAT GGGCACCGCCGAGAAGTTGAATCCCCGCGAGAACATCGCCTGCATGCACT TTATGGAGCACGAGGTTCTGCGGGTGGCCCGCGAGAAGCAGTTCGCCGGC ATCTTCACCACCAACACCAGTCCGCTGACGCAGCAGCTGGCGGATGTCTA CCACTATAAGACGCTTCTCAACTTCCAGGTGAACGAGTACGTGCACTCCG ACGGCAGCCGTCCATTCGGCGATGCACCGGACGAGCAGCGCGCTATTGTC CATTGGAAGGAGGTGGGCAAATAGGACGACCACCCGGTGGACGTGTCCCC AAACCAGATCTGCAGCGAATTTATCCCGCACCACGTATTATATAGTTAAC TAGCATAACCTACCACCTAGTATTAGCCCTAGGCATAGTGTAACTTAGCG AGAAGTTTCGTAAGTTTGTGTTGACTAGTTGTAAGCCTTTGATTTCCAGA CAATTAAATACACAACAATCAATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
e-RA | 3261 | e-RA | 60..3184 | 1..3125 | 15625 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 17055712..17056837 | 1393..268 | 5630 | 100 | Minus |
chr3R | 27901430 | chr3R | 17054620..17055391 | 2332..1561 | 3860 | 100 | Minus |
chr3R | 27901430 | chr3R | 17053646..17054172 | 3123..2597 | 2635 | 100 | Minus |
chr3R | 27901430 | chr3R | 17060700..17060967 | 268..1 | 1340 | 100 | Minus |
chr3R | 27901430 | chr3R | 17054225..17054401 | 2600..2424 | 885 | 100 | Minus |
chr3R | 27901430 | chr3R | 17055479..17055648 | 1560..1391 | 850 | 100 | Minus |
chr3R | 27901430 | chr3R | 17054462..17054553 | 2424..2333 | 460 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 21231909..21233034 | 1393..268 | 5630 | 100 | Minus |
3R | 32079331 | 3R | 21230817..21231588 | 2332..1561 | 3860 | 100 | Minus |
3R | 32079331 | 3R | 21229841..21230369 | 3125..2597 | 2645 | 100 | Minus |
3R | 32079331 | 3R | 21236895..21237162 | 268..1 | 1340 | 100 | Minus |
3R | 32079331 | 3R | 21230422..21230598 | 2600..2424 | 885 | 100 | Minus |
3R | 32079331 | 3R | 21231676..21231845 | 1560..1391 | 850 | 100 | Minus |
3R | 32079331 | 3R | 21230659..21230750 | 2424..2333 | 460 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 20972740..20973865 | 1393..268 | 5630 | 100 | Minus |
3R | 31820162 | 3R | 20971648..20972419 | 2332..1561 | 3860 | 100 | Minus |
3R | 31820162 | 3R | 20970672..20971200 | 3125..2597 | 2645 | 100 | Minus |
3R | 31820162 | 3R | 20977726..20977993 | 268..1 | 1340 | 100 | Minus |
3R | 31820162 | 3R | 20971253..20971429 | 2600..2424 | 885 | 100 | Minus |
3R | 31820162 | 3R | 20972507..20972676 | 1560..1391 | 850 | 100 | Minus |
3R | 31820162 | 3R | 20971490..20971581 | 2424..2333 | 460 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 17053646..17054169 | 2600..3123 | 100 | <- | Minus |
chr3R | 17054226..17054401 | 2424..2599 | 100 | <- | Minus |
chr3R | 17054463..17054553 | 2333..2423 | 100 | <- | Minus |
chr3R | 17054620..17055391 | 1561..2332 | 100 | <- | Minus |
chr3R | 17055479..17055646 | 1393..1560 | 100 | <- | Minus |
chr3R | 17055713..17056836 | 269..1392 | 100 | <- | Minus |
chr3R | 17060700..17060967 | 1..268 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
e-RA | 1..2640 | 285..2924 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
e-RA | 1..2640 | 285..2924 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
e-RA | 1..2640 | 285..2924 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
e-RA | 1..2640 | 285..2924 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
e-RA | 17..3139 | 1..3123 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
e-RA | 17..3139 | 1..3123 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
e-RA | 16..3138 | 1..3123 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
e-RA | 17..3139 | 1..3123 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
e-RA | 16..3138 | 1..3123 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21236895..21237162 | 1..268 | 100 | Minus | |
3R | 21229843..21230366 | 2600..3123 | 100 | <- | Minus |
3R | 21230423..21230598 | 2424..2599 | 100 | <- | Minus |
3R | 21230660..21230750 | 2333..2423 | 100 | <- | Minus |
3R | 21230817..21231588 | 1561..2332 | 100 | <- | Minus |
3R | 21231676..21231843 | 1393..1560 | 100 | <- | Minus |
3R | 21231910..21233033 | 269..1392 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21236895..21237162 | 1..268 | 100 | Minus | |
3R | 21229843..21230366 | 2600..3123 | 100 | <- | Minus |
3R | 21230423..21230598 | 2424..2599 | 100 | <- | Minus |
3R | 21230660..21230750 | 2333..2423 | 100 | <- | Minus |
3R | 21230817..21231588 | 1561..2332 | 100 | <- | Minus |
3R | 21231676..21231843 | 1393..1560 | 100 | <- | Minus |
3R | 21231910..21233033 | 269..1392 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21236895..21237162 | 1..268 | 100 | Minus | |
3R | 21229843..21230366 | 2600..3123 | 100 | <- | Minus |
3R | 21230423..21230598 | 2424..2599 | 100 | <- | Minus |
3R | 21230660..21230750 | 2333..2423 | 100 | <- | Minus |
3R | 21230817..21231588 | 1561..2332 | 100 | <- | Minus |
3R | 21231676..21231843 | 1393..1560 | 100 | <- | Minus |
3R | 21231910..21233033 | 269..1392 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 17056382..17056472 | 2333..2423 | 100 | <- | Minus |
arm_3R | 17055565..17056088 | 2600..3123 | 100 | <- | Minus |
arm_3R | 17056145..17056320 | 2424..2599 | 100 | <- | Minus |
arm_3R | 17056539..17057310 | 1561..2332 | 100 | <- | Minus |
arm_3R | 17057398..17057565 | 1393..1560 | 100 | <- | Minus |
arm_3R | 17057632..17058755 | 269..1392 | 100 | <- | Minus |
arm_3R | 17062617..17062884 | 1..268 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20971254..20971429 | 2424..2599 | 100 | <- | Minus |
3R | 20971491..20971581 | 2333..2423 | 100 | <- | Minus |
3R | 20970674..20971197 | 2600..3123 | 100 | <- | Minus |
3R | 20971648..20972419 | 1561..2332 | 100 | <- | Minus |
3R | 20972507..20972674 | 1393..1560 | 100 | <- | Minus |
3R | 20972741..20973864 | 269..1392 | 100 | <- | Minus |
3R | 20977726..20977993 | 1..268 | 100 | Minus |
Translation from 284 to 2923
> LP19442.pep MGSLPQLSIVKGLQQDFVPRALHRIFEEQQLRHADKVALIYQPSTTGQGM APSQSSYRQMNERANRAARLLVAETHGRFLQPNSDGDFIVAVCMQPSEGL VTTLLAIWKAGGAYLPIDPSFPANRIHHILLEAKPTLVIRDDDIDAGRFQ GTPTLSTTELYAKSLQLAGSNLLSEEMLRGGNDHIAIVLYTSGSTGVPKG VRLPHESILNRLQWQWATFPYTANEAVSVFKTALTFVDSIAELWGPLMCG LAILVVPKAVTKDPQRLVALLERYKIRRLVLVPTLLRSLLMYLKMEGGGA AQKLLYNLQIWVCSGEPLSVSLASSFFDYFDEGVHRLYNFYGSTEVLGDV TYFACESKKQLSLYDNVPIGIPLSNTVVYLLDADYRPVKNGEIGEIFASG LNLAAGYVNGRDPERFLENPLAVEKKYARLYRTGDYGSLKNGSIMYEGRT DSQVKIRGHRVDLSEVEKNVAELPLVDKAIVLCYHAGQVDQAILAFVKLR DDAPMVTEMQMEARLKDKLADYMTPQVVILEHVPLLVNGKVDRQALLKTY ETANNNEGDSSIVLDFDYSQVPEDLKLTARDLFETVGGVIGRSTRATLAP HSNFYELGGNSLNSIFTVTLLREKGYNIGISEFIAAKNLGEIIEKMAANH DAVQLEEESLNACPHLKMEAVPLRLEHRQEVIDIIVASFYNKADLEQWLK PGVLRTDYSDILNDIWNVLVERDLSFVVYDTNTDRIIGTALNFDARNEPE VDIKSKLLIVFEFLEFCEGPIRDNYLPKGLNQILHSFMMGTAEKLNPREN IACMHFMEHEVLRVAREKQFAGIFTTNTSPLTQQLADVYHYKTLLNFQVN EYVHSDGSRPFGDAPDEQRAIVHWKEVGK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16040-PA | 881 | GF16040-PA | 1..881 | 1..879 | 4564 | 96.5 | Plus |
Dana\GF12065-PA | 536 | GF12065-PA | 110..523 | 117..545 | 161 | 23 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14772-PA | 879 | GG14772-PA | 1..879 | 1..879 | 4689 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18948-PA | 876 | GH18948-PA | 1..874 | 1..878 | 4402 | 92.7 | Plus |
Dgri\GH10773-PA | 1064 | GH10773-PA | 222..648 | 197..632 | 176 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
e-PA | 879 | CG3331-PA | 1..879 | 1..879 | 4529 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10839-PA | 879 | GI10839-PA | 1..877 | 1..878 | 4343 | 91.2 | Plus |
Dmoj\GI10838-PA | 879 | GI10838-PA | 1..876 | 1..877 | 3978 | 84.6 | Plus |
Dmoj\GI17636-PA | 1065 | GI17636-PA | 222..566 | 198..548 | 191 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27165-PA | 879 | GL27165-PA | 1..879 | 1..879 | 4508 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17384-PA | 879 | GA17384-PA | 1..879 | 1..879 | 4504 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15090-PA | 879 | GM15090-PA | 1..879 | 1..879 | 4673 | 99.1 | Plus |
Dsec\GM26863-PA | 537 | GM26863-PA | 181..530 | 175..550 | 170 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\e-PA | 879 | GD19997-PA | 1..879 | 1..879 | 4678 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14444-PA | 894 | GJ14444-PA | 17..892 | 1..878 | 4408 | 92.8 | Plus |
Dvir\GJ18201-PA | 1039 | GJ18201-PA | 224..645 | 198..632 | 165 | 23 | Plus |
Dvir\GJ18629-PA | 544 | GJ18629-PA | 39..532 | 33..547 | 155 | 20.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12773-PA | 876 | GK12773-PA | 1..876 | 1..879 | 4432 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25005-PA | 879 | GE25005-PA | 1..879 | 1..879 | 4666 | 99 | Plus |
Translation from 284 to 2923
> LP19442.hyp MGSLPQLSIVKGLQQDFVPRALHRIFEEQQLRHADKVALIYQPSTTGQGM APSQSSYRQMNERANRAARLLVAETHGRFLQPNSDGDFIVAVCMQPSEGL VTTLLAIWKAGGAYLPIDPSFPANRIHHILLEAKPTLVIRDDDIDAGRFQ GTPTLSTTELYAKSLQLAGSNLLSEEMLRGGNDHIAIVLYTSGSTGVPKG VRLPHESILNRLQWQWATFPYTANEAVSVFKTALTFVDSIAELWGPLMCG LAILVVPKAVTKDPQRLVALLERYKIRRLVLVPTLLRSLLMYLKMEGGGA AQKLLYNLQIWVCSGEPLSVSLASSFFDYFDEGVHRLYNFYGSTEVLGDV TYFACESKKQLSLYDNVPIGIPLSNTVVYLLDADYRPVKNGEIGEIFASG LNLAAGYVNGRDPERFLENPLAVEKKYARLYRTGDYGSLKNGSIMYEGRT DSQVKIRGHRVDLSEVEKNVAELPLVDKAIVLCYHAGQVDQAILAFVKLR DDAPMVTEMQMEARLKDKLADYMTPQVVILEHVPLLVNGKVDRQALLKTY ETANNNEGDSSIVLDFDYSQVPEDLKLTARDLFETVGGVIGRSTRATLAP HSNFYELGGNSLNSIFTVTLLREKGYNIGISEFIAAKNLGEIIEKMAANH DAVQLEEESLNACPHLKMEAVPLRLEHRQEVIDIIVASFYNKADLEQWLK PGVLRTDYSDILNDIWNVLVERDLSFVVYDTNTDRIIGTALNFDARNEPE VDIKSKLLIVFEFLEFCEGPIRDNYLPKGLNQILHSFMMGTAEKLNPREN IACMHFMEHEVLRVAREKQFAGIFTTNTSPLTQQLADVYHYKTLLNFQVN EYVHSDGSRPFGDAPDEQRAIVHWKEVGK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
e-PA | 879 | CG3331-PA | 1..879 | 1..879 | 4529 | 100 | Plus |