BDGP Sequence Production Resources |
Search the DGRC for LP19941
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 199 |
Well: | 41 |
Vector: | pOT2 |
Associated Gene/Transcript | CG13616-RA |
Protein status: | LP19941.pep: gold |
Sequenced Size: | 747 |
Gene | Date | Evidence |
---|---|---|
CG13616 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13616 | 2004-03-05 | Blastp of sequenced clone |
CG13616 | 2008-04-29 | Release 5.5 accounting |
CG13616 | 2008-08-15 | Release 5.9 accounting |
CG13616 | 2008-12-18 | 5.12 accounting |
747 bp (747 high quality bases) assembled on 2004-03-05
GenBank Submission: BT012309
> LP19941.complete TTCTACCGACAGCATGAGGCTCTCTCGAACTGGCCACTTCAGTTTGCTGG CACTTTGCCTCCTGCTGCACGAGGTGCAATCCCAGGTGATGTCCATGTCA TCAGCTGCCAACCGGACAGGGGAGGTGACCAAAGTTCTGCGCCGGCACAA GCGTTATCTGGCATTTCCGGAGGGCTCATCGGTTTCGGGCGCCGTTTGCA TGACGATCGGCATGATTGGCAATCCAGATGTTGACTATCTCAGCTGGGCG GTCAACTGGGGCGTGGCATACGATCTGCCCAACCATCAGTGGGTCATCCA ACACGCCCATGGACTGAACGCCACCCTGGCCAAGGATACCATTAAGCGGC GATCCCGGCGAGCTTTTTACGATGAGGTGCAGTCTTTATTTGATAACATG GGTTTCAATGGTCGTTCGTGTGTGGCTCGAGCTCTATGCGAAAGTGCCAA GTTCATGTTGCCGTCGGTGGAACGGGGAAACATGTTGCAGGAGTTGGTCA GGACTGTCTTTAGCCTGCCTCCCTCCCCGGTGGCTGCCCACGAACCACAA GCCCATCATCAGTATGATCGAATCTACCGTCGATCCAAGCGGAGCTCACG GGATTGCCATGAAATCTATCCAGGATGTCAGTTTTCACTACTGGCTTTGG CATTGGGCAAATATATGGCGGCCACAACCACGAAGTTTAGTTCATTTAAC TATATGTGAAAGAAAAAATGATTTAATTGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 20216771..20217103 | 397..729 | 1665 | 100 | Plus |
chr3R | 27901430 | chr3R | 20216500..20216709 | 187..396 | 1050 | 100 | Plus |
chr3R | 27901430 | chr3R | 20216251..20216438 | 1..188 | 940 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 24393430..24393780 | 397..747 | 1725 | 99.4 | Plus |
3R | 32079331 | 3R | 24393159..24393368 | 187..396 | 1050 | 100 | Plus |
3R | 32079331 | 3R | 24392910..24393097 | 1..188 | 940 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 24134261..24134611 | 397..747 | 1725 | 99.4 | Plus |
3R | 31820162 | 3R | 24133990..24134199 | 187..396 | 1050 | 100 | Plus |
3R | 31820162 | 3R | 24133741..24133928 | 1..188 | 940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 20216251..20216437 | 1..187 | 100 | -> | Plus |
chr3R | 20216501..20216709 | 188..396 | 100 | -> | Plus |
chr3R | 20216771..20217103 | 397..729 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13616-RA | 1..696 | 14..709 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13616-RA | 1..696 | 14..709 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13616-RA | 1..696 | 14..709 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13616-RA | 1..696 | 14..709 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13616-RA | 1..696 | 14..709 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13616-RA | 1..729 | 1..729 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13616-RA | 1..729 | 1..729 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13616-RA | 22..750 | 1..729 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13616-RA | 1..729 | 1..729 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13616-RA | 22..750 | 1..729 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24392910..24393096 | 1..187 | 100 | -> | Plus |
3R | 24393160..24393368 | 188..396 | 100 | -> | Plus |
3R | 24393430..24393762 | 397..729 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24392910..24393096 | 1..187 | 100 | -> | Plus |
3R | 24393160..24393368 | 188..396 | 100 | -> | Plus |
3R | 24393430..24393762 | 397..729 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24392910..24393096 | 1..187 | 100 | -> | Plus |
3R | 24393160..24393368 | 188..396 | 100 | -> | Plus |
3R | 24393430..24393762 | 397..729 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 20218632..20218818 | 1..187 | 100 | -> | Plus |
arm_3R | 20218882..20219090 | 188..396 | 100 | -> | Plus |
arm_3R | 20219152..20219484 | 397..729 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24133991..24134199 | 188..396 | 100 | -> | Plus |
3R | 24134261..24134593 | 397..729 | 100 | Plus | |
3R | 24133741..24133927 | 1..187 | 100 | -> | Plus |
Translation from 0 to 708
> LP19941.hyp STDSMRLSRTGHFSLLALCLLLHEVQSQVMSMSSAANRTGEVTKVLRRHK RYLAFPEGSSVSGAVCMTIGMIGNPDVDYLSWAVNWGVAYDLPNHQWVIQ HAHGLNATLAKDTIKRRSRRAFYDEVQSLFDNMGFNGRSCVARALCESAK FMLPSVERGNMLQELVRTVFSLPPSPVAAHEPQAHHQYDRIYRRSKRSSR DCHEIYPGCQFSLLALALGKYMAATTTKFSSFNYM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13616-PA | 231 | CG13616-PA | 1..231 | 5..235 | 1214 | 100 | Plus |
CG5768-PC | 262 | CG5768-PC | 80..253 | 46..221 | 411 | 47.8 | Plus |
CG5768-PD | 262 | CG5768-PD | 80..253 | 46..221 | 405 | 46.7 | Plus |
CG13616-PB | 63 | CG13616-PB | 1..60 | 5..64 | 287 | 98.3 | Plus |
Translation from 13 to 708
> LP19941.pep MRLSRTGHFSLLALCLLLHEVQSQVMSMSSAANRTGEVTKVLRRHKRYLA FPEGSSVSGAVCMTIGMIGNPDVDYLSWAVNWGVAYDLPNHQWVIQHAHG LNATLAKDTIKRRSRRAFYDEVQSLFDNMGFNGRSCVARALCESAKFMLP SVERGNMLQELVRTVFSLPPSPVAAHEPQAHHQYDRIYRRSKRSSRDCHE IYPGCQFSLLALALGKYMAATTTKFSSFNYM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20751-PA | 200 | GF20751-PA | 1..197 | 1..195 | 802 | 77.5 | Plus |
Dana\GF20713-PA | 260 | GF20713-PA | 78..251 | 42..217 | 418 | 46.1 | Plus |
Dana\GF20716-PA | 445 | GF20716-PA | 346..440 | 112..211 | 148 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11293-PA | 233 | GG11293-PA | 1..233 | 1..231 | 1119 | 93.1 | Plus |
Dere\GG12344-PA | 401 | GG12344-PA | 217..392 | 40..217 | 434 | 48.9 | Plus |
Dere\GG12344-PA | 401 | GG12344-PA | 84..173 | 40..128 | 269 | 54.4 | Plus |
Dere\GG12347-PA | 475 | GG12347-PA | 376..468 | 112..209 | 150 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18821-PA | 233 | GH18821-PA | 27..233 | 23..231 | 801 | 68.9 | Plus |
Dgri\GH18788-PA | 437 | GH18788-PA | 248..427 | 37..217 | 431 | 45.9 | Plus |
Dgri\GH23842-PA | 403 | GH23842-PA | 263..403 | 118..231 | 277 | 43.4 | Plus |
Dgri\GH18788-PA | 437 | GH18788-PA | 86..174 | 42..127 | 248 | 52.8 | Plus |
Dgri\GH23580-PA | 175 | GH23580-PA | 86..174 | 42..127 | 247 | 52.8 | Plus |
Dgri\GH24022-PA | 215 | GH24022-PA | 116..208 | 112..209 | 144 | 33.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13616-PA | 231 | CG13616-PA | 1..231 | 1..231 | 1214 | 100 | Plus |
CG5768-PC | 262 | CG5768-PC | 80..253 | 42..217 | 411 | 47.8 | Plus |
CG5768-PD | 262 | CG5768-PD | 80..253 | 42..217 | 405 | 46.7 | Plus |
CG13616-PB | 63 | CG13616-PB | 1..60 | 1..60 | 287 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10080-PA | 230 | GI10080-PA | 1..230 | 3..231 | 805 | 64.3 | Plus |
Dmoj\GI22678-PA | 417 | GI22678-PA | 233..407 | 42..217 | 434 | 49.2 | Plus |
Dmoj\GI22678-PA | 417 | GI22678-PA | 89..182 | 40..130 | 251 | 48.9 | Plus |
Dmoj\GI22681-PA | 426 | GI22681-PA | 327..419 | 112..209 | 152 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21866-PA | 244 | GL21866-PA | 30..244 | 20..231 | 968 | 80.9 | Plus |
Dper\GL21979-PA | 408 | GL21979-PA | 222..398 | 40..217 | 436 | 48.4 | Plus |
Dper\GL21979-PA | 408 | GL21979-PA | 87..176 | 42..130 | 272 | 55.6 | Plus |
Dper\GL21982-PA | 527 | GL21982-PA | 427..520 | 112..209 | 157 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12409-PA | 244 | GA12409-PA | 30..244 | 20..231 | 951 | 79.5 | Plus |
Dpse\GA27332-PB | 281 | GA27332-PB | 97..271 | 42..217 | 433 | 49.4 | Plus |
Dpse\GA27332-PA | 281 | GA27332-PA | 97..271 | 42..217 | 418 | 47.2 | Plus |
Dpse\GA14664-PA | 527 | GA14664-PA | 427..520 | 112..209 | 156 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26599-PA | 234 | GM26599-PA | 1..234 | 1..231 | 1207 | 95.7 | Plus |
Dsec\GM23484-PA | 397 | GM23484-PA | 213..388 | 40..217 | 418 | 46.7 | Plus |
Dsec\GM23484-PA | 397 | GM23484-PA | 78..167 | 40..128 | 272 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18290-PA | 411 | GD18290-PA | 227..402 | 40..217 | 422 | 47.3 | Plus |
Dsim\GD18290-PA | 411 | GD18290-PA | 92..234 | 40..193 | 275 | 41.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23816-PA | 230 | GJ23816-PA | 33..230 | 32..231 | 817 | 74.5 | Plus |
Dvir\GJ23405-PA | 274 | GJ23405-PA | 86..264 | 40..217 | 427 | 48.4 | Plus |
Dvir\GJ23409-PA | 463 | GJ23409-PA | 364..456 | 112..209 | 147 | 34.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22340-PA | 226 | GK22340-PA | 6..226 | 8..231 | 775 | 65.5 | Plus |
Dwil\GK22822-PA | 423 | GK22822-PA | 240..414 | 42..217 | 417 | 46.1 | Plus |
Dwil\GK22822-PA | 423 | GK22822-PA | 33..140 | 22..129 | 279 | 50.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23485-PA | 234 | GE23485-PA | 1..234 | 1..231 | 1142 | 94.4 | Plus |
Dyak\GE10797-PA | 393 | GE10797-PA | 209..384 | 40..217 | 430 | 48.4 | Plus |
Dyak\GE10797-PA | 393 | GE10797-PA | 80..216 | 40..193 | 276 | 41.3 | Plus |