Clone LP20160 Report

Search the DGRC for LP20160

Clone and Library Details

Library:LP
Tissue Source:Drosophila melanogaster larval-early pupal
Created by:Ling Hong
Date Registered:1998-06-11
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:201
Well:60
Vector:pOT2
Associated Gene/TranscriptAP-1gamma-RC
Protein status:LP20160.pep: gold
Sequenced Size:5011

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
AP-1gamma-RA 2009-06-22 Replacement based on scoring

Clone Sequence Records

LP20160.complete Sequence

5011 bp assembled on 2009-10-09

GenBank Submission: BT100000.1

> LP20160.complete
CTCGCACCCACTACCACTGTTGCGCTCATCATCAACATATTCTCGACGAA
ACATTTTTTTTTACTTGTTACGTTGATTTTGTGGCGTTTAAAATAGCGAT
TAACCAGCGCCAAGTTGGCCCAGCGAACATGTGCTAAAGCGTAAATGCAG
TGCTAGAATAGGCATTTATTCAATTGCAGAATCATTCCAGTTAAAAGCGA
AGGTGTGTGCGTGTACTTGCGACGACGGGCCGTGTGTGTTGAAATTTTTT
TTTTAGTTTTTGTCGCGTTGTTAAATTTTATAGTTGAAAAAAGCTAACGT
GTTTCCTGATTATTCATTAACAAAAAAAACGTAACGCCGCCAAGTGCGCG
AATGCATCCAATTTGTTAAAACGGAAATGCCCGTTGAAAAGTGTGCCATA
GATTTTCCTGCCCTTTTCTTGTTGGCCCAAAAGCAACAAAAAGAAAACAG
AAGAGCACATAAGCCGGCAAATAGTTAACAAAACCAGACGTAATAGAATA
TAATAATAATAACAAAAATATAAATAAAAATACGAACCAGTAAAAGAAGG
AGCAAAAAAAAGGCTGCCACACAAGTGATTCAACGTTTCTCGTCGCCACA
ATGAACTCCGAGCATGGATTTAATCCAGCCTTCAATATGGCCACCATACG
GCAAGCATTCACAGAGGCGGTGGAGAGAGTCAGAATGCCTACGCCCACAC
GCCTGCGCGACCTCATCCGACAGATTCGCGCCGCCAGAACCGCCGCCGAG
GAGCGGGCGGTGGTCAACAAAGAGTGCGCCTACATACGGAGCACGTTCCG
CGAGGAGGACTCCGTCTGGCGCTGTCGCAACATTGCCAAGCTGCTGTACA
TACACATGCTCGGCTATCCGGCTCACTTTGGCCAACTGGAGTGCCTTAAG
CTGACGGCCAGCACGCGGTTCACAGACAAGCGGATCGGCTACCTGGGCGC
CATGCTGCTGCTGGATGAGCGGCAGGATGTCCACCTGCTTATCACCAACT
GCTTGAAGAACGACTTGAACAGCTCGACGCAGTTCGTCGTGGGCCTAGCC
CTATGCACTCTGGGTGCGATCGCCTCACCGGAGATGGCCCGAGATCTGGC
CAGCGAGGTGGAGCGTCTGATGAAGTCCCCGAACACGTACATTCGCAAGA
AGGCGACGCTGTGCGCCTTTCGCGTCATTCGCCGTGTGCCCGAGCTAATG
GAGATCTTCTTGCCGGCCACGCGTTCCCTGCTCAGCGAGAAGAATCATGG
AATTTTGATCACTGGCGTTACGCTGATCACGGAGATGTGCGAGAACAGTT
CGGACACGCTGATGCATTTCAAGAAGGATAGCGGAAATCGAGAGATTGTG
CCGAACTTGGTGCGCATCCTGAAGAATCTGATCCTGGGCGGCTATTCGCC
GGAGCACGATGTCAGCGGCGTGAGCGATCCGTTCCTGCAGGTGAAGATAC
TGCGACTGCTGCGCATACTGGGCCACAACGATCCGGACGCCTCGGAGGCG
ATGAACGATATACTGGCCCAGGTGGCCACCAACACGGAGACGAGCAAGAA
TGTGGGCAATACCATCCTCTACGAGACCGTGCTCTCCATCATGGACATAC
GCTCGGAGGGTGGACTGCGCGTCCTGGCCGTCAATATACTGGGACGATTC
CTGCTCAACTCGGACAAGAACATACGGTATGTGGCACTGAACACGCTGCT
GCGAACGGTGCATGCGGACACGTCGGCGGTGCAGCGGCATCGCACCACCA
TTCTGGAGTGCCTCAAGGATCCGGACGTCTCGATCCGTCGGCGGGCGATG
GAGCTATCGTTTGCGCTGATCAATGCACAAAACATACGTACAATGACCAA
GGAGCTGCTGCTCTTCCTCGAGAAGGCGGACGCCGAGTTCAAGGCGCAGT
GCAGCTCGGGCATGATACTGGCCGCCGAGCGTTACTCCCCGACAACGCGC
TGGCATCTGGATACGCAGCTGAGCGTGCTGATTGCAGCGGGAAACTATGT
GCGCGACGACGTCGTCTCCTCCACCATCCAGCTGGTGTCCAGCAGTCCCG
TCCCGGAGCAGACGTACATCACGAACCGTTTCTGGGAGTCGCTGCAGGTG
GCCAATCATTGCGAGGACAAGCAGCCGCTGCTGCAGGTTGCCGTCTGGGC
CATAGGCGAGTACGGCGATCTCTTTATGTACGGCGCCAACGAGGATGAGT
TTGAACGGCCCACTGAGAGTGATCTGATCGCTGTGTATTATAAGTTTTTA
ACCTCTGCTCAAGTCTCGACCACAAGCAAGCAATATGCTCTGGTCTCCCT
AGCCAAGCTAAGCACACGTTTGCAACAGTGCGTGGAGGAAATTCAGGCAC
TGATCACGTCTTTTGGTAGCCATCTGAATGTGGATCTGCAGCAGCGAGGC
GTGGAGTTCACACAGCTCTTTGGCCATTACAAGCATCTGCGTCCACCGCT
GCTGGAAAAGATGCCGGCCATGCAGATCAGCAGGATTAGCTCGCAGAATG
GCGAGAGCGGCGGTGGCTCCTTCGACGACAACAGTCCCGATGTCATCGAA
AATGGCGTGGAAGGAGGCGGCGGTGGCGGACACTCACTTATCGAAAGCAA
TATGAACACCCTTGGTGACAATACGAACATTTTGCTAGATCTGCTGGGCA
GCACGGATCTCTCTGCGGGAGGAGCTGGTGATTTGGTGGCAGCCACGGAT
CTCTCGAATGCCGTGCATAAAAAGAACTCGCGCAATGCCAACGATGTGGT
GGCGCCCGTTTCCAATAACCAGGATCTGTTGGATCTGCTCGATCTGGATC
TATCGGCGCCCTCGTCCACGACGACGGGTGCGCCAGCGGGCGGAGGAGGA
GGCGGTGGCATTGTGGCTCTGGTGGGCGATAATAACCAGAGCAGTGCGGC
AAACATGAATAACATGCTCGGTGGCCTGGACTTGGGCGGCTTTGGATCTG
GTCTGGACAGCTCTGCCAGCATACCCACAAACGGCAACGATTTGGCCAGC
ATGCTGGGTGGCCTGGGTGCCCCGCCGGCTGCATCACCGTCTCTGGCGGC
ATCAGCTCCCGTTGGCAACCTTATCGATGGCCATGCCGGCAGTCTGCTGG
CCGATCTGAATCCCACGGCTGCCTCCAACAATGTAGTAGTGCCTCCACAG
GGTCCCAGGCTGACGGCGCTGGACAAGGATGGGTTACTCGTGCAACTGGT
TTCGGTCAGGGGCAGCGACTGCATGCGCATCTATATGACGACCACGAATA
ACTCAGACAATACCCTGGATCAGTACTTGCTGCAGGCGGCTGTGCAAAGG
AGTTTCCAGCTGCAGATGCTGACGCCATCTGGTTCCGTGCTGCCGCCCGG
CGGAGTTATAACGCAGGAGATGCGCGTGGTGGCCACGTCGAATGCGACAC
TGCGGATGCGTTTGCGCATACAGTACGTGCTCGATGGCCAGCAGCAGGTG
GAACAGACGGAGGTCAGTGGATTCCCCGAGCAGCAGCCGGCGCCGGCGGC
CGCAGAGTAGAACTGCGATTGTATTAAAGCGAAACCAGATTAGCCTAATA
TCGGAAATAATTCAATACACGGAGCAGCAGCAACAAGAACAGCAGCAACA
CTAAGGAAACACACACACACACACTGTGGTTGTCACACATTTATTGTAAA
ATAAGTTATCACACACACACACACACACACGGTGAAACACAGAGACACCC
ACGCAATCGCATCTAGATCAGAGCATTTTCCAAATCGGCGCACAGCGTTG
TTCAGACTCAGACTGTTTGTTTTTTTTTTTTTTTAGCCGGGTTAGTCTCC
AGTGGGAGCTGGGTAGCTGAGAAAAAATGAGGGCGGTGGGGTGGTTGCGA
CCCGCCCAAAAGCAGTTAACTTATATATTTTCACTAATTTATATCTATAC
ATATATATATATATAAACATACTACTTGTCAAATCAATCTTAACGTTCGC
CTTGTTTTATTATTAATAATTCTCTCAGTTTAAATGGTGTGTAAACTCTT
GTGTGTAAAAGACAACTTTCAGTTTTAAGTTAAGACAATAAAAGTCAACC
CCACTATTCCCCATATTATATGGCAAATAACAAAGGCAAAGAAAGGAAAG
GAAAGGAAAATTTAAGATATGTATTAAAACCGATTGTGAAATTATGTAGC
AGAAGCATTTAAAAAGCTTAGCATTTTAATAGCATCGAAATGGAGAGCGA
GTTGAACGATTTTGTTTGATGCCATTTCGATCAGTTTATTTGTTATTTCT
ATATGTAATGAGTACGTGTGTTTGTTTGTTTAATTGTTTTTTTGTCCCGT
CCTGAGACTCTTTGATCGGTTCCCGGCTTCTGTGGGCCAGCCCCTGATAT
TCCTTTTTACTTACAACGTTCATAATATAAATATATATATATATATATAA
ATACATATACAAAGACACCGAAAACACACAAAAACACGACCACCACGCGG
ATATATATATATATATTAAATGATGTATTGTTATTTCCTGTGCGCACGTA
CTTAAGGCGGAAAATCAGCAGCAACCAGAGAAAGTCTATGAAATAAAAAT
GAAATGAAATCGATGAAAAAACACAAATCAGCTAGCACTGTGGAAAACTA
GATAATATCTATGATAAATATAATTGTAACTAAGGAGGACGCAGCTTAGA
ACTATATATTAACTGATTAGTTGCCGTCGCCGAGATGAGATGAGATGATG
ATGATGATGAGACGATGGATATGGAAATGACGATGATGATGATGGGGGGC
ATCGAGAAGCAAAGAAAATCCATTAACTATTATTATTATTATTATTATTA
CGATTATAAATGAATTGCGCAGCTGTATGAGAAGGAAAGAGAGGGAGAGA
GATAAGAAAATAATAACATTAACATATTGTACAATATATTATTATTTTTG
TATTATTATCATTTCCTTTTATATCTACTTATATTCCACAAACCTTTTGA
GCCGAAATAAACAAACGATTTCGTTTTATCGAAGGACTACACCAAAAAAA
AAAAAAAAAAA

LP20160.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:53:51
Subject Length Description Subject Range Query Range Score Percent Strand
AP-1gamma.c 4992 AP-1gamma.c 1..4992 1..4993 24910 99.9 Plus
AP-1gamma.b 4889 AP-1gamma.b 326..4889 429..4993 22755 99.9 Plus
AP-1gamma-RF 4970 AP-1gamma-RF 1325..4970 1343..4989 18180 99.9 Plus
AP-1gamma-RF 4970 AP-1gamma-RF 1..1326 1..1326 6630 100 Plus
AP-1gamma.b 4889 AP-1gamma.b 1..330 1..330 1650 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:54:34
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 9007936..9009537 3394..4992 7790 99.5 Plus
chrX 22417052 chrX 9005767..9006363 1601..2197 2985 100 Plus
chrX 22417052 chrX 9006983..9007499 2625..3141 2540 99.4 Plus
chrX 22417052 chrX 9001350..9001781 1..433 2115 99.8 Plus
chrX 22417052 chrX 9006632..9006920 2337..2625 1445 100 Plus
chrX 22417052 chrX 9005434..9005692 1343..1601 1280 99.6 Plus
chrX 22417052 chrX 9003645..9003884 1011..1250 1200 100 Plus
chrX 22417052 chrX 9003389..9003578 821..1010 950 100 Plus
chrX 22417052 chrX 9002610..9002799 428..617 935 99.5 Plus
chrX 22417052 chrX 9007552..9007697 3141..3286 730 100 Plus
chrX 22417052 chrX 9003179..9003322 678..821 720 100 Plus
chrX 22417052 chrX 9006427..9006567 2197..2337 705 100 Plus
chrX 22417052 chrX 9007756..9007867 3283..3394 530 98.2 Plus
chrX 22417052 chrX 9003953..9004031 1249..1327 395 100 Plus
chrX 22417052 chrX 9002875..9002937 617..679 315 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:58:31 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:54:31
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9116146..9117745 3394..4994 7940 99.9 Plus
X 23542271 X 9113974..9114570 1601..2197 2985 100 Plus
X 23542271 X 9115195..9115711 2625..3141 2585 100 Plus
X 23542271 X 9109555..9109987 1..433 2165 100 Plus
X 23542271 X 9114838..9115126 2337..2625 1445 100 Plus
X 23542271 X 9113641..9113899 1343..1601 1295 100 Plus
X 23542271 X 9111854..9112093 1011..1250 1200 100 Plus
X 23542271 X 9111597..9111786 821..1010 950 100 Plus
X 23542271 X 9110816..9111005 428..617 935 99.5 Plus
X 23542271 X 9115764..9115909 3141..3286 730 100 Plus
X 23542271 X 9111385..9111528 678..821 720 100 Plus
X 23542271 X 9114633..9114773 2197..2337 705 100 Plus
X 23542271 X 9115968..9116079 3283..3394 560 100 Plus
X 23542271 X 9112162..9112240 1249..1327 395 100 Plus
X 23542271 X 9111081..9111143 617..679 315 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:50:19
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 9124244..9125843 3394..4994 7950 99.8 Plus
X 23527363 X 9122072..9122668 1601..2197 2985 100 Plus
X 23527363 X 9123293..9123809 2625..3141 2585 100 Plus
X 23527363 X 9117653..9118085 1..433 2165 100 Plus
X 23527363 X 9122936..9123224 2337..2625 1445 100 Plus
X 23527363 X 9121739..9121997 1343..1601 1295 100 Plus
X 23527363 X 9119952..9120191 1011..1250 1200 100 Plus
X 23527363 X 9119695..9119884 821..1010 950 100 Plus
X 23527363 X 9118914..9119103 428..617 935 99.4 Plus
X 23527363 X 9123862..9124007 3141..3286 730 100 Plus
X 23527363 X 9119483..9119626 678..821 720 100 Plus
X 23527363 X 9122731..9122871 2197..2337 705 100 Plus
X 23527363 X 9124066..9124177 3283..3394 560 100 Plus
X 23527363 X 9120260..9120338 1249..1327 395 100 Plus
X 23527363 X 9119179..9119241 617..679 315 100 Plus
Blast to na_te.dros performed 2019-03-16 07:54:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2611..2753 3547..3690 150 58.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6942..7032 3528..3623 134 64.6 Plus
roo 9092 roo DM_ROO 9092bp 1100..1276 3563..3735 128 58.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6806..6843 3563..3600 127 81.6 Plus
Dana\Tom 7060 Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). 756..830 319..245 123 62.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6735..6864 3479..3603 122 62.1 Plus
transib2 2844 transib2 TRANSIB2 2844bp 300..387 4470..4384 122 61.4 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1558..1605 3573..3619 120 75 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6731..6772 3563..3604 120 76.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6752..6793 3563..3604 120 76.2 Plus
roo 9092 roo DM_ROO 9092bp 1137..1240 3573..3678 120 63.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2302..2347 3567..3611 119 76.1 Plus

LP20160.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:55:13 Download gff for LP20160.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 9006632..9006920 2337..2625 100 -> Plus
chrX 9001350..9001781 1..433 99 -> Plus
chrX 9002616..9002799 434..617 77 -> Plus
chrX 9002876..9002937 618..679 100 -> Plus
chrX 9003181..9003322 680..821 100 -> Plus
chrX 9003390..9003578 822..1010 100 -> Plus
chrX 9003645..9003883 1011..1249 100 -> Plus
chrX 9003954..9004030 1250..1326 100 -> Plus
chrX 9004543..9004560 1327..1344 100 -> Plus
chrX 9005436..9005692 1345..1601 99 -> Plus
chrX 9005768..9006363 1602..2197 100 -> Plus
chrX 9006428..9006566 2198..2336 100 -> Plus
chrX 9006984..9007499 2626..3141 99 -> Plus
chrX 9007553..9007696 3142..3285 100 -> Plus
chrX 9007759..9007866 3286..3393 98 -> Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:57:17 Download gff for LP20160.complete
Subject Subject Range Query Range Percent Splice Strand
AP-1gamma-RC 1..2910 601..3510 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:42:25 Download gff for LP20160.complete
Subject Subject Range Query Range Percent Splice Strand
AP-1gamma-RC 1..2910 601..3510 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:02:03 Download gff for LP20160.complete
Subject Subject Range Query Range Percent Splice Strand
AP-1gamma-RC 1..2910 601..3510 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:44:36 Download gff for LP20160.complete
Subject Subject Range Query Range Percent Splice Strand
AP-1gamma-RC 1..2910 601..3510 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-09 10:17:05 Download gff for LP20160.complete
Subject Subject Range Query Range Percent Splice Strand
AP-1gamma-RC 153..4710 431..4989 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:42:25 Download gff for LP20160.complete
Subject Subject Range Query Range Percent Splice Strand
AP-1gamma-RC 153..4710 431..4989 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:02:03 Download gff for LP20160.complete
Subject Subject Range Query Range Percent Splice Strand
AP-1gamma-RH 6..4997 1..4993 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:44:36 Download gff for LP20160.complete
Subject Subject Range Query Range Percent Splice Strand
AP-1gamma-RH 6..4997 1..4993 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:55:13 Download gff for LP20160.complete
Subject Subject Range Query Range Percent Splice Strand
X 9113643..9113899 1345..1601 100 -> Plus
X 9109555..9109987 1..433 100 -> Plus
X 9110822..9111005 434..617 100 -> Plus
X 9111082..9111143 618..679 100 -> Plus
X 9111387..9111528 680..821 100 -> Plus
X 9111598..9111786 822..1010 100 -> Plus
X 9111854..9112092 1011..1249 100 -> Plus
X 9112163..9112239 1250..1326 100 -> Plus
X 9112750..9112767 1327..1344 100 -> Plus
X 9113975..9114570 1602..2197 100 -> Plus
X 9114634..9114772 2198..2336 100 -> Plus
X 9114838..9115126 2337..2625 100 -> Plus
X 9115196..9115711 2626..3141 100 -> Plus
X 9115765..9115908 3142..3285 100 -> Plus
X 9115971..9116078 3286..3393 100 -> Plus
X 9116146..9117744 3394..4993 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:55:13 Download gff for LP20160.complete
Subject Subject Range Query Range Percent Splice Strand
X 9113643..9113899 1345..1601 100 -> Plus
X 9109555..9109987 1..433 100 -> Plus
X 9110822..9111005 434..617 100 -> Plus
X 9111082..9111143 618..679 100 -> Plus
X 9111387..9111528 680..821 100 -> Plus
X 9111598..9111786 822..1010 100 -> Plus
X 9111854..9112092 1011..1249 100 -> Plus
X 9112163..9112239 1250..1326 100 -> Plus
X 9112750..9112767 1327..1344 100 -> Plus
X 9113975..9114570 1602..2197 100 -> Plus
X 9114634..9114772 2198..2336 100 -> Plus
X 9114838..9115126 2337..2625 100 -> Plus
X 9115196..9115711 2626..3141 100 -> Plus
X 9115765..9115908 3142..3285 100 -> Plus
X 9115971..9116078 3286..3393 100 -> Plus
X 9116146..9117744 3394..4993 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:55:13 Download gff for LP20160.complete
Subject Subject Range Query Range Percent Splice Strand
X 9113643..9113899 1345..1601 100 -> Plus
X 9109555..9109987 1..433 100 -> Plus
X 9110822..9111005 434..617 100 -> Plus
X 9111082..9111143 618..679 100 -> Plus
X 9111387..9111528 680..821 100 -> Plus
X 9111598..9111786 822..1010 100 -> Plus
X 9111854..9112092 1011..1249 100 -> Plus
X 9112163..9112239 1250..1326 100 -> Plus
X 9112750..9112767 1327..1344 100 -> Plus
X 9113975..9114570 1602..2197 100 -> Plus
X 9114634..9114772 2198..2336 100 -> Plus
X 9114838..9115126 2337..2625 100 -> Plus
X 9115196..9115711 2626..3141 100 -> Plus
X 9115765..9115908 3142..3285 100 -> Plus
X 9115971..9116078 3286..3393 100 -> Plus
X 9116146..9117744 3394..4993 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:02:03 Download gff for LP20160.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 9005631..9005819 822..1010 100 -> Plus
arm_X 9005887..9006125 1011..1249 100 -> Plus
arm_X 9006196..9006272 1250..1326 100 -> Plus
arm_X 9006783..9006800 1327..1344 100 -> Plus
arm_X 9003588..9004020 1..433 100 -> Plus
arm_X 9004855..9005038 434..617 100 -> Plus
arm_X 9005115..9005176 618..679 100 -> Plus
arm_X 9005420..9005561 680..821 100 -> Plus
arm_X 9007676..9007932 1345..1601 100 -> Plus
arm_X 9008008..9008603 1602..2197 100 -> Plus
arm_X 9008667..9008805 2198..2336 100 -> Plus
arm_X 9008871..9009159 2337..2625 100 -> Plus
arm_X 9009229..9009744 2626..3141 100 -> Plus
arm_X 9009798..9009941 3142..3285 100 -> Plus
arm_X 9010004..9010111 3286..3393 100 -> Plus
arm_X 9010179..9011777 3394..4993 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:23:43 Download gff for LP20160.complete
Subject Subject Range Query Range Percent Splice Strand
X 9119485..9119626 680..821 100 -> Plus
X 9119696..9119884 822..1010 100 -> Plus
X 9118920..9119103 434..617 100 -> Plus
X 9117653..9118085 1..433 100 -> Plus
X 9119180..9119241 618..679 100 -> Plus
X 9119952..9120190 1011..1249 100 -> Plus
X 9120261..9120337 1250..1326 100 -> Plus
X 9120848..9120865 1327..1344 100 -> Plus
X 9121741..9121997 1345..1601 100 -> Plus
X 9122073..9122668 1602..2197 100 -> Plus
X 9122732..9122870 2198..2336 100 -> Plus
X 9122936..9123224 2337..2625 100 -> Plus
X 9123294..9123809 2626..3141 100 -> Plus
X 9123863..9124006 3142..3285 100 -> Plus
X 9124069..9124176 3286..3393 100 -> Plus
X 9124244..9125842 3394..4993 99   Plus

LP20160.pep Sequence

Translation from 600 to 3509

> LP20160.pep
MNSEHGFNPAFNMATIRQAFTEAVERVRMPTPTRLRDLIRQIRAARTAAE
ERAVVNKECAYIRSTFREEDSVWRCRNIAKLLYIHMLGYPAHFGQLECLK
LTASTRFTDKRIGYLGAMLLLDERQDVHLLITNCLKNDLNSSTQFVVGLA
LCTLGAIASPEMARDLASEVERLMKSPNTYIRKKATLCAFRVIRRVPELM
EIFLPATRSLLSEKNHGILITGVTLITEMCENSSDTLMHFKKDSGNREIV
PNLVRILKNLILGGYSPEHDVSGVSDPFLQVKILRLLRILGHNDPDASEA
MNDILAQVATNTETSKNVGNTILYETVLSIMDIRSEGGLRVLAVNILGRF
LLNSDKNIRYVALNTLLRTVHADTSAVQRHRTTILECLKDPDVSIRRRAM
ELSFALINAQNIRTMTKELLLFLEKADAEFKAQCSSGMILAAERYSPTTR
WHLDTQLSVLIAAGNYVRDDVVSSTIQLVSSSPVPEQTYITNRFWESLQV
ANHCEDKQPLLQVAVWAIGEYGDLFMYGANEDEFERPTESDLIAVYYKFL
TSAQVSTTSKQYALVSLAKLSTRLQQCVEEIQALITSFGSHLNVDLQQRG
VEFTQLFGHYKHLRPPLLEKMPAMQISRISSQNGESGGGSFDDNSPDVIE
NGVEGGGGGGHSLIESNMNTLGDNTNILLDLLGSTDLSAGGAGDLVAATD
LSNAVHKKNSRNANDVVAPVSNNQDLLDLLDLDLSAPSSTTTGAPAGGGG
GGGIVALVGDNNQSSAANMNNMLGGLDLGGFGSGLDSSASIPTNGNDLAS
MLGGLGAPPAASPSLAASAPVGNLIDGHAGSLLADLNPTAASNNVVVPPQ
GPRLTALDKDGLLVQLVSVRGSDCMRIYMTTTNNSDNTLDQYLLQAAVQR
SFQLQMLTPSGSVLPPGGVITQEMRVVATSNATLRMRLRIQYVLDGQQQV
EQTEVSGFPEQQPAPAAAE*

LP20160.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:31:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19194-PA 983 GF19194-PA 20..958 7..946 4403 93.5 Plus
Dana\GF24806-PA 938 GF24806-PA 15..605 38..624 524 28 Plus
Dana\g-PA 1045 GF22348-PA 19..492 35..522 425 26 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:31:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18289-PA 983 GG18289-PA 20..979 7..966 5011 98.3 Plus
Dere\GG24651-PA 940 GG24651-PA 15..605 38..624 524 28 Plus
Dere\g-PA 1030 GG19491-PA 19..492 35..522 428 26 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:31:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12288-PA 967 GH12288-PA 20..963 7..962 4342 89.5 Plus
Dgri\GH10520-PA 936 GH10520-PA 15..605 38..624 533 27.5 Plus
Dgri\GH12886-PA 1041 GH12886-PA 18..491 35..522 429 26 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:04:24
Subject Length Description Subject Range Query Range Score Percent Strand
AP-1gamma-PH 969 CG9113-PH 1..969 1..969 4902 100 Plus
AP-1gamma-PC 969 CG9113-PC 1..969 1..969 4902 100 Plus
AP-1gamma-PD 982 CG9113-PD 20..982 7..969 4868 100 Plus
AP-1gamma-PI 963 CG9113-PI 1..963 1..969 4853 99.4 Plus
AP-1gamma-PF 963 CG9113-PF 1..963 1..969 4853 99.4 Plus
AP-1gamma-PG 963 CG9113-PG 1..963 1..969 4853 99.4 Plus
AP-1gamma-PE 963 CG9113-PE 1..963 1..969 4853 99.4 Plus
AP-1gamma-PA 963 CG9113-PA 1..963 1..969 4853 99.4 Plus
AP-1gamma-PB 976 CG9113-PB 20..976 7..969 4819 99.4 Plus
AP-2alpha-PA 940 CG4260-PA 16..704 39..717 529 26.2 Plus
AP-2alpha-PB 952 CG4260-PB 44..716 55..717 521 26.3 Plus
g-PD 1033 CG10986-PD 19..491 35..521 436 26 Plus
g-PB 1034 CG10986-PB 19..491 35..521 430 26 Plus
g-PF 967 CG10986-PF 1..424 86..521 378 25.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:31:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15533-PA 960 GI15533-PA 20..958 7..964 4318 89.9 Plus
Dmoj\GI18037-PA 936 GI18037-PA 15..605 38..624 522 28 Plus
Dmoj\GI14439-PA 1049 GI14439-PA 18..492 35..523 431 25.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:31:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13092-PA 967 GL13092-PA 20..966 7..966 4239 89.9 Plus
Dper\GL19265-PA 939 GL19265-PA 15..679 38..693 528 27.3 Plus
Dper\GL19850-PA 1028 GL19850-PA 18..466 62..522 414 25.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:31:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26124-PA 965 GA26124-PA 20..964 7..966 4245 90.2 Plus
Dpse\GA18063-PA 939 GA18063-PA 15..679 38..693 528 27.3 Plus
Dpse\GA10688-PA 1056 GA10688-PA 18..491 35..522 427 25.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:31:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13719-PA 982 GM13719-PA 20..982 7..969 5075 99.3 Plus
Dsec\GM16671-PA 940 GM16671-PA 15..605 38..624 524 28 Plus
Dsec\GM17595-PA 829 GM17595-PA 19..492 35..522 423 26.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:31:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16929-PA 965 GD16929-PA 20..965 7..969 4883 96.4 Plus
Dsim\GD22960-PA 940 GD22960-PA 15..605 38..624 524 28 Plus
Dsim\GD15877-PA 260 GD15877-PA 19..211 35..229 302 33.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:31:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14878-PA 961 GJ14878-PA 20..959 7..964 4392 90.5 Plus
Dvir\GJ19747-PA 936 GJ19747-PA 15..605 38..624 523 28 Plus
Dvir\GJ18778-PA 1063 GJ18778-PA 18..491 35..522 433 25.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:31:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25037-PA 960 GK25037-PA 20..957 7..964 4103 86.2 Plus
Dwil\GK24645-PA 944 GK24645-PA 15..680 38..693 528 27.6 Plus
Dwil\GK25122-PA 1029 GK25122-PA 18..491 35..522 432 25.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:31:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15820-PA 983 GE15820-PA 20..981 7..968 5055 99 Plus
Dyak\GE16139-PA 940 GE16139-PA 15..605 38..624 521 28 Plus
Dyak\g-PA 993 GE16143-PA 19..492 35..522 430 26 Plus

LP20160.hyp Sequence

Translation from 600 to 3509

> LP20160.hyp
MNSEHGFNPAFNMATIRQAFTEAVERVRMPTPTRLRDLIRQIRAARTAAE
ERAVVNKECAYIRSTFREEDSVWRCRNIAKLLYIHMLGYPAHFGQLECLK
LTASTRFTDKRIGYLGAMLLLDERQDVHLLITNCLKNDLNSSTQFVVGLA
LCTLGAIASPEMARDLASEVERLMKSPNTYIRKKATLCAFRVIRRVPELM
EIFLPATRSLLSEKNHGILITGVTLITEMCENSSDTLMHFKKDSGNREIV
PNLVRILKNLILGGYSPEHDVSGVSDPFLQVKILRLLRILGHNDPDASEA
MNDILAQVATNTETSKNVGNTILYETVLSIMDIRSEGGLRVLAVNILGRF
LLNSDKNIRYVALNTLLRTVHADTSAVQRHRTTILECLKDPDVSIRRRAM
ELSFALINAQNIRTMTKELLLFLEKADAEFKAQCSSGMILAAERYSPTTR
WHLDTQLSVLIAAGNYVRDDVVSSTIQLVSSSPVPEQTYITNRFWESLQV
ANHCEDKQPLLQVAVWAIGEYGDLFMYGANEDEFERPTESDLIAVYYKFL
TSAQVSTTSKQYALVSLAKLSTRLQQCVEEIQALITSFGSHLNVDLQQRG
VEFTQLFGHYKHLRPPLLEKMPAMQISRISSQNGESGGGSFDDNSPDVIE
NGVEGGGGGGHSLIESNMNTLGDNTNILLDLLGSTDLSAGGAGDLVAATD
LSNAVHKKNSRNANDVVAPVSNNQDLLDLLDLDLSAPSSTTTGAPAGGGG
GGGIVALVGDNNQSSAANMNNMLGGLDLGGFGSGLDSSASIPTNGNDLAS
MLGGLGAPPAASPSLAASAPVGNLIDGHAGSLLADLNPTAASNNVVVPPQ
GPRLTALDKDGLLVQLVSVRGSDCMRIYMTTTNNSDNTLDQYLLQAAVQR
SFQLQMLTPSGSVLPPGGVITQEMRVVATSNATLRMRLRIQYVLDGQQQV
EQTEVSGFPEQQPAPAAAE*

LP20160.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:05:17
Subject Length Description Subject Range Query Range Score Percent Strand
AP-1gamma-PH 969 CG9113-PH 1..969 1..969 4902 100 Plus
AP-1gamma-PC 969 CG9113-PC 1..969 1..969 4902 100 Plus
AP-1gamma-PD 982 CG9113-PD 20..982 7..969 4868 100 Plus
AP-1gamma-PI 963 CG9113-PI 1..963 1..969 4853 99.4 Plus
AP-1gamma-PF 963 CG9113-PF 1..963 1..969 4853 99.4 Plus