BDGP Sequence Production Resources |
Search the DGRC for LP20380
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 203 |
Well: | 80 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8680-RA |
Protein status: | LP20380.pep: gold |
Sequenced Size: | 580 |
Gene | Date | Evidence |
---|---|---|
CG8680 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8680 | 2004-01-31 | Blastp of sequenced clone |
CG8680 | 2008-04-29 | Release 5.5 accounting |
CG8680 | 2008-08-15 | Release 5.9 accounting |
CG8680 | 2008-12-18 | 5.12 accounting |
580 bp (580 high quality bases) assembled on 2004-01-31
GenBank Submission: BT011535
> LP20380.complete ACGCTGTCAGCCTGACAGTTACAGGGTGTTTCGTGTCAGAATACATTTTG CGTACAAATTTTTGTGGTAAAAAATGGCCAGCAAGCAATTGGTAAACAAT TTGTCCAAACTCGGCCTTCCGCGACAGAATTGGATGTCCCCACTGGCCAG CGTTCGCCACTCCAGCTGCCGCGGCGACATCGAGAAGGTTACACACACCG GACAAGTGTTCGATAAGGAGGACTACCGCAATGCCCGGTTCGTGAACGCC AAGCGGTATGTGAACGAGAACTGGGGCATCAAGCTCATCGAGGAGGTGCC ACCCAAGGAGTGCACCGAACGAGTTGTCTTCTGCGACGGCGGCGATGGTC CTTTGGGTCATCCCAAAGTGTACATCAACCTGGACAAACCCGGAAATCAC ATCTGCGGCTACTGCGGCCTGCGCTTCGTCAAGAAAGATGACCATCATCA TTGAGGAAACCATAGTGGCCAATAGATTTTAGCTAAAACACCTTTCTATC CTGTTGCGCTAGCTTGAACTAAACTAAACTAAATAAAATTAGAACACCAA AAAGCTAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 5099108..5099314 | 207..1 | 1035 | 100 | Minus |
chr2L | 23010047 | chr2L | 5098836..5099013 | 383..206 | 890 | 100 | Minus |
chr2L | 23010047 | chr2L | 5098600..5098774 | 556..382 | 875 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 5098600..5098773 | 383..556 | 100 | <- | Minus |
chr2L | 5098837..5099013 | 206..382 | 100 | <- | Minus |
chr2L | 5099110..5099314 | 1..205 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8680-RA | 1..381 | 74..454 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8680-RA | 1..381 | 74..454 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8680-RA | 1..381 | 74..454 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8680-RA | 1..381 | 74..454 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8680-RA | 1..381 | 74..454 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8680-RA | 1..556 | 1..556 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8680-RA | 1..556 | 1..556 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8680-RA | 1..544 | 13..556 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8680-RA | 1..520 | 37..556 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8680-RC | 75..630 | 1..556 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5099737..5099913 | 206..382 | 100 | <- | Minus |
2L | 5100010..5100214 | 1..205 | 100 | Minus | |
2L | 5099500..5099673 | 383..556 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5099737..5099913 | 206..382 | 100 | <- | Minus |
2L | 5100010..5100214 | 1..205 | 100 | Minus | |
2L | 5099500..5099673 | 383..556 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5099737..5099913 | 206..382 | 100 | <- | Minus |
2L | 5100010..5100214 | 1..205 | 100 | Minus | |
2L | 5099500..5099673 | 383..556 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 5099500..5099673 | 383..556 | 100 | <- | Minus |
arm_2L | 5099737..5099913 | 206..382 | 100 | <- | Minus |
arm_2L | 5100010..5100214 | 1..205 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5099500..5099673 | 383..556 | 100 | <- | Minus |
2L | 5099737..5099913 | 206..382 | 100 | <- | Minus |
2L | 5100010..5100214 | 1..205 | 100 | Minus |
Translation from 73 to 453
> LP20380.hyp MASKQLVNNLSKLGLPRQNWMSPLASVRHSSCRGDIEKVTHTGQVFDKED YRNARFVNAKRYVNENWGIKLIEEVPPKECTERVVFCDGGDGPLGHPKVY INLDKPGNHICGYCGLRFVKKDDHHH*
Translation from 73 to 453
> LP20380.pep MASKQLVNNLSKLGLPRQNWMSPLASVRHSSCRGDIEKVTHTGQVFDKED YRNARFVNAKRYVNENWGIKLIEEVPPKECTERVVFCDGGDGPLGHPKVY INLDKPGNHICGYCGLRFVKKDDHHH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15523-PA | 125 | GF15523-PA | 1..125 | 1..125 | 605 | 88 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24316-PA | 126 | GG24316-PA | 1..126 | 1..126 | 669 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11154-PA | 126 | GH11154-PA | 1..126 | 1..126 | 553 | 80.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ND-13A-PC | 126 | CG8680-PC | 1..126 | 1..126 | 702 | 100 | Plus |
ND-13A-PB | 126 | CG8680-PB | 1..126 | 1..126 | 702 | 100 | Plus |
ND-13A-PA | 126 | CG8680-PA | 1..126 | 1..126 | 702 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17860-PA | 124 | GI17860-PA | 1..124 | 1..124 | 526 | 79 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19319-PA | 126 | GL19319-PA | 1..126 | 1..126 | 570 | 81.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21258-PA | 126 | GA21258-PA | 1..126 | 1..126 | 566 | 81 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18034-PA | 126 | GM18034-PA | 1..126 | 1..126 | 673 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22662-PA | 126 | GD22662-PA | 1..126 | 1..126 | 675 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17358-PA | 125 | GJ17358-PA | 1..125 | 1..125 | 491 | 77.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24561-PA | 126 | GK24561-PA | 1..126 | 1..126 | 561 | 80.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18696-PA | 126 | GE18696-PA | 1..126 | 1..126 | 657 | 95.2 | Plus |