BDGP Sequence Production Resources |
Search the DGRC for LP20617
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 206 |
Well: | 17 |
Vector: | pOT2 |
Associated Gene/Transcript | CG32483-RA |
Protein status: | LP20617.pep: validated not full length |
Sequenced Size: | 1397 |
Gene | Date | Evidence |
---|---|---|
CG32483 | 2003-01-01 | Sim4 clustering to Release 3 |
CG32483 | 2004-10-22 | Blastp of sequenced clone |
CG32483 | 2008-04-29 | Release 5.5 accounting |
CG32483 | 2008-08-15 | Release 5.9 accounting |
CG32483 | 2008-12-18 | 5.12 accounting |
1397 bp (1397 high quality bases) assembled on 2004-10-22
GenBank Submission: BT016041
> LP20617.complete TCGATTCGGTTGGTAGCACTCCTGGCATTGTTCGCCGCCTTGGCGCATGG CAAACCCGGATACGGTCCCGGAGAGCAGGACTGGGGCTACGTAGATGTGC GTCCCGGTGCCCACATGTTCTACTGGCTGTACTACACCACCGCCAATGTT TCGAGCTATACCGAAAGACCATTAGCCATTTGGCTCCAAGGAGGTCCCGG TGCCTCTTCGACGGGGTATGGAAACTTTGAAGAACTTGGGCCCGTCGATT TGTACGGAGATTGGCGCAGCTGGACCTGGGTGAAGGACATGAATGTCCTC TTTATTGACAACCCCGTAGGCAGTGGTTTTAGCTACGTGGACAACACGGC CTTTTACACGGCCACCAATAAGGAGATCGCTCTAGATTTGGTTGAGCTGA TGAAGGGATTCTATACCCTGCATCCAGAGTTCGAGGAGGTGCCGCTGCAT ATATTCTGCGAGAGTTACGGTGGAAAGATGGCGCCGGAGTTTGCACTCGA ACTGTACTACGCCAAGAAGCGTGGTGAGGTCAAGAGCAACCTTACCTCGG TGGCTTTGGGGGATCCATGGACCTCGCCCATCGACTCCGTGCTCGCATGG GGACCTTTTCTCAGAGAAATGGGAATCGTGGACCACGCGGGATACAATGC CATTCAAGAGGCAGCGAACTTCACGGCTCAGTTGGTGGAGGAGGAGCGAT GGATTCAGGCCACCTATCAGTGGGGCAACACCCAGTGGGAGGTGATGAAA GCCTCCAAGGGTGTGGACTTCTACAACGTGCTGAAGGAGACAAAGGGTGG TCTCTACCAGAGATCAAAGGCCTTGACCTCCGAAGAACGTCTGTATCGCA CCATGGTGAAATACGATATTGATGAGGATCGAACCAAGTTACTGGAGGAT CTGATGCGGGGCCCGGTGGCGGAAACCCTGGGTATACCTTCGAATGTCAT CTGGGGATCGCAGAGTGGGACCACTTTTGACATCCACAGAACGGACTTCA TGAAGCCAGTCATCCACATTGTGAACGAATTGCTGGAGAAGACTCCTCTG AAGGTCGGCGTATTCTCCGGTGGCCTGGATTTGATTTGCGCCACACCGGG CACCGTCAACTGGATAGCCAAGCTGGACTGGAGCCGAAAGGACGAGTACC TGGCTGCTCCACGCAATGGCATCACGGTGGATCGCATCTTGGAGGGCTAT CAAAAGACGGGCGGTAACTTTACCATGTTCTGGATCAACCGAAGTGGTCA CATGGCTCCGGCGGACAACCCTGCGGCTATGAGTCATGTACTTCGAGAGT TTACCTCATTTGGCTAAATTCATTTAAATTGAATTATAATAAACTCAGTA TGCAAGCCAGTTGTATACTATATTCGTCTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32483-RA | 1492 | CG32483-RA | 107..1490 | 1..1384 | 6920 | 100 | Plus |
CG3344-RA | 1689 | CG3344-RA | 313..476 | 67..230 | 385 | 82.3 | Plus |
CG3344-RA | 1689 | CG3344-RA | 685..847 | 439..601 | 365 | 81.5 | Plus |
CG3344-RA | 1689 | CG3344-RA | 516..588 | 270..342 | 215 | 86.3 | Plus |
CG3344-RA | 1689 | CG3344-RA | 1309..1367 | 1057..1115 | 175 | 86.4 | Plus |
CG3344-RA | 1689 | CG3344-RA | 601..659 | 355..413 | 160 | 84.7 | Plus |
CG3344-RA | 1689 | CG3344-RA | 1094..1159 | 842..907 | 150 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 688995..689781 | 835..49 | 3935 | 100 | Minus |
chr3L | 24539361 | chr3L | 688344..688702 | 1379..1021 | 1795 | 100 | Minus |
chr3L | 24539361 | chr3L | 688756..688943 | 1021..834 | 940 | 100 | Minus |
chr3L | 24539361 | chr3L | 686621..687155 | 601..67 | 890 | 77.8 | Minus |
chr3L | 24539361 | chr3L | 689850..689899 | 50..1 | 250 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 689174..689960 | 835..49 | 3935 | 100 | Minus |
3L | 28110227 | 3L | 688518..688881 | 1384..1021 | 1820 | 100 | Minus |
3L | 28110227 | 3L | 688935..689122 | 1021..834 | 940 | 100 | Minus |
3L | 28110227 | 3L | 686821..687355 | 601..67 | 890 | 77.8 | Minus |
3L | 28110227 | 3L | 690029..690078 | 50..1 | 250 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 689174..689960 | 835..49 | 3935 | 100 | Minus |
3L | 28103327 | 3L | 688518..688881 | 1384..1021 | 1820 | 100 | Minus |
3L | 28103327 | 3L | 688935..689122 | 1021..834 | 940 | 100 | Minus |
3L | 28103327 | 3L | 687192..687355 | 230..67 | 385 | 82.3 | Minus |
3L | 28103327 | 3L | 686821..686983 | 601..439 | 365 | 81.5 | Minus |
3L | 28103327 | 3L | 690029..690078 | 50..1 | 250 | 100 | Minus |
3L | 28103327 | 3L | 687080..687152 | 342..270 | 215 | 86.3 | Minus |
3L | 28103327 | 3L | 686193..686251 | 1115..1057 | 175 | 86.4 | Minus |
3L | 28103327 | 3L | 687009..687067 | 413..355 | 160 | 84.7 | Minus |
2L | 23513712 | 2L | 15902220..15902305 | 149..64 | 160 | 79 | Minus |
3L | 28103327 | 3L | 686456..686521 | 907..842 | 150 | 81.8 | Minus |
2L | 23513712 | 2L | 15899753..15899817 | 501..437 | 145 | 81.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 688344..688701 | 1022..1379 | 100 | <- | Minus |
chr3L | 688756..688941 | 836..1021 | 100 | <- | Minus |
chr3L | 688995..689780 | 50..835 | 100 | <- | Minus |
chr3L | 689851..689899 | 1..49 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32483-RA | 4..1320 | 1..1317 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32483-RA | 4..1320 | 1..1317 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32483-RA | 4..1320 | 1..1317 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32483-RA | 4..1320 | 1..1317 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32483-RA | 4..1320 | 1..1317 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32483-RA | 4..1320 | 1..1317 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32483-RA | 4..1382 | 1..1379 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32483-RA | 4..1382 | 1..1379 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32483-RA | 4..1320 | 1..1317 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32483-RA | 4..1382 | 1..1379 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 688523..688880 | 1022..1379 | 100 | <- | Minus |
3L | 688935..689120 | 836..1021 | 100 | <- | Minus |
3L | 689174..689959 | 50..835 | 100 | <- | Minus |
3L | 690030..690078 | 1..49 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 688523..688880 | 1022..1379 | 100 | <- | Minus |
3L | 688935..689120 | 836..1021 | 100 | <- | Minus |
3L | 689174..689959 | 50..835 | 100 | <- | Minus |
3L | 690030..690078 | 1..49 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 688523..688880 | 1022..1379 | 100 | <- | Minus |
3L | 688935..689120 | 836..1021 | 100 | <- | Minus |
3L | 689174..689959 | 50..835 | 100 | <- | Minus |
3L | 690030..690078 | 1..49 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 689174..689959 | 50..835 | 100 | <- | Minus |
arm_3L | 690030..690078 | 1..49 | 100 | Minus | |
arm_3L | 688523..688880 | 1022..1379 | 100 | <- | Minus |
arm_3L | 688935..689120 | 836..1021 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 688523..688880 | 1022..1379 | 100 | <- | Minus |
3L | 688935..689120 | 836..1021 | 100 | <- | Minus |
3L | 689174..689959 | 50..835 | 100 | <- | Minus |
3L | 690030..690078 | 1..49 | 100 | Minus |
Translation from 0 to 1316
> LP20617.pep SIRLVALLALFAALAHGKPGYGPGEQDWGYVDVRPGAHMFYWLYYTTANV SSYTERPLAIWLQGGPGASSTGYGNFEELGPVDLYGDWRSWTWVKDMNVL FIDNPVGSGFSYVDNTAFYTATNKEIALDLVELMKGFYTLHPEFEEVPLH IFCESYGGKMAPEFALELYYAKKRGEVKSNLTSVALGDPWTSPIDSVLAW GPFLREMGIVDHAGYNAIQEAANFTAQLVEEERWIQATYQWGNTQWEVMK ASKGVDFYNVLKETKGGLYQRSKALTSEERLYRTMVKYDIDEDRTKLLED LMRGPVAETLGIPSNVIWGSQSGTTFDIHRTDFMKPVIHIVNELLEKTPL KVGVFSGGLDLICATPGTVNWIAKLDWSRKDEYLAAPRNGITVDRILEGY QKTGGNFTMFWINRSGHMAPADNPAAMSHVLREFTSFG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24074-PA | 439 | GF24074-PA | 5..439 | 4..438 | 2135 | 89.7 | Plus |
Dana\GF24075-PA | 446 | GF24075-PA | 7..446 | 2..438 | 1621 | 68.3 | Plus |
Dana\GF14968-PA | 428 | GF14968-PA | 13..428 | 5..438 | 1090 | 47.5 | Plus |
Dana\GF14967-PA | 430 | GF14967-PA | 8..424 | 2..437 | 892 | 42.8 | Plus |
Dana\GF17355-PA | 478 | GF17355-PA | 85..476 | 29..437 | 381 | 29.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14645-PA | 439 | GG14645-PA | 2..439 | 1..438 | 2277 | 96.3 | Plus |
Dere\GG14646-PA | 446 | GG14646-PA | 24..446 | 18..438 | 1645 | 71.6 | Plus |
Dere\GG24186-PA | 427 | GG24186-PA | 15..427 | 4..438 | 1120 | 49.7 | Plus |
Dere\GG24185-PA | 425 | GG24185-PA | 6..419 | 5..437 | 919 | 44 | Plus |
Dere\GG15819-PA | 482 | GG15819-PA | 89..480 | 29..437 | 402 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16039-PA | 442 | GH16039-PA | 8..442 | 4..438 | 1988 | 83.9 | Plus |
Dgri\GH16040-PA | 446 | GH16040-PA | 7..446 | 1..438 | 1624 | 67.1 | Plus |
Dgri\GH11350-PA | 665 | GH11350-PA | 266..665 | 18..438 | 1135 | 52.6 | Plus |
Dgri\GH21639-PA | 479 | GH21639-PA | 87..477 | 29..437 | 363 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32483-PA | 439 | CG32483-PA | 2..439 | 1..438 | 2356 | 100 | Plus |
hiro-PA | 446 | CG3344-PA | 6..446 | 4..438 | 1663 | 70.3 | Plus |
CG31823-PA | 427 | CG31823-PA | 15..427 | 8..438 | 1122 | 49.9 | Plus |
CG31821-PB | 427 | CG31821-PB | 5..421 | 1..437 | 911 | 44.1 | Plus |
CG31821-PA | 427 | CG31821-PA | 5..421 | 1..437 | 911 | 44.1 | Plus |
CG4572-PD | 482 | CG4572-PD | 82..480 | 16..437 | 414 | 29 | Plus |
CG4572-PB | 482 | CG4572-PB | 82..480 | 16..437 | 414 | 29 | Plus |
CG4572-PA | 482 | CG4572-PA | 82..480 | 16..437 | 414 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12302-PA | 442 | GI12302-PA | 8..442 | 4..438 | 2025 | 85.5 | Plus |
Dmoj\GI12303-PA | 442 | GI12303-PA | 6..442 | 2..438 | 1642 | 68.8 | Plus |
Dmoj\GI12304-PA | 450 | GI12304-PA | 6..443 | 2..438 | 1634 | 67.9 | Plus |
Dmoj\GI17365-PA | 422 | GI17365-PA | 23..422 | 17..438 | 1125 | 51.7 | Plus |
Dmoj\GI20092-PA | 478 | GI20092-PA | 84..476 | 29..437 | 385 | 28.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20837-PA | 439 | GL20837-PA | 5..439 | 4..438 | 2107 | 89.4 | Plus |
Dper\GL20838-PA | 445 | GL20838-PA | 6..445 | 2..438 | 1653 | 69.3 | Plus |
Dper\GL15326-PA | 426 | GL15326-PA | 25..426 | 17..438 | 1131 | 50.9 | Plus |
Dper\GL15319-PA | 415 | GL15319-PA | 8..415 | 4..438 | 974 | 44.4 | Plus |
Dper\GL15325-PA | 426 | GL15325-PA | 5..421 | 1..437 | 892 | 43.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16937-PA | 439 | GA16937-PA | 5..439 | 4..438 | 2103 | 89.2 | Plus |
Dpse\GA17392-PA | 445 | GA17392-PA | 6..445 | 2..438 | 1653 | 69.3 | Plus |
Dpse\GA16505-PA | 426 | GA16505-PA | 25..426 | 17..438 | 1131 | 50.9 | Plus |
Dpse\GA16504-PA | 426 | GA16504-PA | 5..421 | 1..437 | 894 | 43.8 | Plus |
Dpse\GA28793-PA | 399 | GA28793-PA | 8..399 | 4..438 | 867 | 41.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14261-PA | 446 | GM14261-PA | 24..446 | 18..438 | 1634 | 71.2 | Plus |
Dsec\GM17924-PA | 427 | GM17924-PA | 15..427 | 8..438 | 1134 | 50.3 | Plus |
Dsec\GM17923-PA | 425 | GM17923-PA | 6..419 | 5..437 | 912 | 45.6 | Plus |
Dsec\GM14260-PA | 262 | GM14260-PA | 2..162 | 1..161 | 854 | 98.8 | Plus |
Dsec\GM14260-PA | 262 | GM14260-PA | 165..262 | 341..438 | 516 | 98 | Plus |
Dsec\GM26891-PA | 482 | GM26891-PA | 89..480 | 29..437 | 417 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13517-PA | 439 | GD13517-PA | 2..439 | 1..438 | 2311 | 98.2 | Plus |
Dsim\GD13518-PA | 446 | GD13518-PA | 24..446 | 18..438 | 1629 | 70.9 | Plus |
Dsim\GD11968-PA | 285 | GD11968-PA | 1..285 | 134..438 | 718 | 46.9 | Plus |
Dsim\GD20098-PA | 482 | GD20098-PA | 89..480 | 29..437 | 409 | 29.7 | Plus |
Dsim\GD21932-PA | 123 | GD21932-PA | 18..123 | 333..438 | 350 | 55.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13239-PA | 442 | GJ13239-PA | 4..442 | 1..438 | 2060 | 86.3 | Plus |
Dvir\GJ13240-PA | 444 | GJ13240-PA | 6..444 | 2..438 | 1660 | 68.9 | Plus |
Dvir\GJ18041-PA | 478 | GJ18041-PA | 70..478 | 9..438 | 1135 | 51.3 | Plus |
Dvir\GJ19859-PA | 479 | GJ19859-PA | 85..477 | 29..437 | 388 | 28.2 | Plus |
Dvir\GJ22150-PA | 481 | GJ22150-PA | 91..479 | 31..437 | 322 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16682-PA | 442 | GK16682-PA | 8..442 | 4..438 | 2062 | 87.4 | Plus |
Dwil\GK16683-PA | 445 | GK16683-PA | 2..445 | 1..438 | 1657 | 67.3 | Plus |
Dwil\GK24263-PA | 426 | GK24263-PA | 10..426 | 5..438 | 1116 | 49.7 | Plus |
Dwil\GK24262-PA | 428 | GK24262-PA | 5..420 | 3..437 | 905 | 43.9 | Plus |
Dwil\GK22811-PA | 481 | GK22811-PA | 92..479 | 31..437 | 378 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21005-PA | 439 | GE21005-PA | 2..439 | 1..438 | 2290 | 97 | Plus |
Dyak\GE21006-PA | 446 | GE21006-PA | 24..446 | 18..438 | 1642 | 71.2 | Plus |
Dyak\GE19379-PA | 427 | GE19379-PA | 19..427 | 10..438 | 1124 | 49.2 | Plus |
Dyak\GE19378-PA | 425 | GE19378-PA | 6..419 | 5..437 | 933 | 46.2 | Plus |
Dyak\GE25110-PA | 482 | GE25110-PA | 89..480 | 29..437 | 407 | 29.2 | Plus |
Translation from 0 to 1316
> LP20617.hyp SIRLVALLALFAALAHGKPGYGPGEQDWGYVDVRPGAHMFYWLYYTTANV SSYTERPLAIWLQGGPGASSTGYGNFEELGPVDLYGDWRSWTWVKDMNVL FIDNPVGSGFSYVDNTAFYTATNKEIALDLVELMKGFYTLHPEFEEVPLH IFCESYGGKMAPEFALELYYAKKRGEVKSNLTSVALGDPWTSPIDSVLAW GPFLREMGIVDHAGYNAIQEAANFTAQLVEEERWIQATYQWGNTQWEVMK ASKGVDFYNVLKETKGGLYQRSKALTSEERLYRTMVKYDIDEDRTKLLED LMRGPVAETLGIPSNVIWGSQSGTTFDIHRTDFMKPVIHIVNELLEKTPL KVGVFSGGLDLICATPGTVNWIAKLDWSRKDEYLAAPRNGITVDRILEGY QKTGGNFTMFWINRSGHMAPADNPAAMSHVLREFTSFG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32483-PA | 439 | CG32483-PA | 2..439 | 1..438 | 2356 | 100 | Plus |
CG3344-PA | 446 | CG3344-PA | 6..446 | 4..438 | 1663 | 70.3 | Plus |
CG31823-PA | 427 | CG31823-PA | 15..427 | 8..438 | 1122 | 49.9 | Plus |
CG31821-PB | 427 | CG31821-PB | 5..421 | 1..437 | 911 | 44.1 | Plus |
CG31821-PA | 427 | CG31821-PA | 5..421 | 1..437 | 911 | 44.1 | Plus |