BDGP Sequence Production Resources |
Search the DGRC for LP20978
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 209 |
Well: | 78 |
Vector: | pOT2 |
Associated Gene/Transcript | CG17259-RA |
Protein status: | LP20978.pep: gold |
Sequenced Size: | 1760 |
Gene | Date | Evidence |
---|---|---|
CG17259 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17259 | 2004-10-04 | Blastp of sequenced clone |
CG17259 | 2008-04-29 | Release 5.5 accounting |
CG17259 | 2008-08-15 | Release 5.9 accounting |
CG17259 | 2008-12-18 | 5.12 accounting |
1760 bp (1760 high quality bases) assembled on 2004-10-04
GenBank Submission: BT016042
> LP20978.complete CCTAGCCACGTTGTGAAAACGCCGACGAAACGCGAGAGAATCGAAGCTAA TACGCGACTGAAACTGAAATAAAGGGTAACTAAAATGGTGCTGGATCTGG ATCTGTTTCGCAGCGACAAGGGGGGCAACCCGGACCTCGTGCGCGAAAAT CAAAAGAAGCGCTTCAAGGATGTGGCGCTGGTGGAGACTGTGATCGCCAA GGATACGGAGTGGCGTCAGTGCCGCCACCGTGCCGACAACCTGAACAAGG TCAAGAACGTCTGCAGCAAGGTGATCGGCGAGAAGATGAAGAAGAAGGAG CCGGTTGGTGCCATGAGCGAGGACCTGCCCGCAGACGTGACCAAGGACCT CACAGAGATTGTAGCCGAGACACTGCAGCCGTTGACCGTCAACCAGATCA AGCAGCTACGCGTTCTCATCGACGACGCAATGACCGAGAACCAGAAGTCG CTAGAGCTTGCCGAGCAGACGAGGAACACCTCACTGCGGGAGGTGGGCAA CCACCTGCACGAGTCCGTGCCTGTGTCTAACGACGAGGACGAGAACCGCG TGGAGCGCACCTTTGGCGACTGCGAAAAGCGCGGCAAGTACTCGCATGTG GACCTCATCGTGATGATCGACGGCATGAACGCGGAGAAAGGAGCCGTGGT GTCCGGCGGACGTGGTTACTTTCTTACCGGAGCCGCAGTCTTTTTGGAGC AGGCTCTTATCCAGCACGCTCTGCACCTGCTGTACGCCCGTGACTACGTT CCCCTGTACACGCCCTTCTTCATGCGAAAGGAGGTAATGCAGGAGGTGGC CCAGCTGTCACAGTTCGACGAGGAGCTCTACAAGGTGGTGGGCAAGGGCA GCGAGAAGGCGGAGGAGGTGGGCATCGATGAGAAGTACCTGATCGCCACC TCAGAGCAGCCTATCGCCGCCTACCATCGCGATGAATGGCTACCGGAGTC TTCGCTGCCCATTAAGTATGCTGGTCTGTCCACCTGCTTCCGACAGGAAG TGGGCTCGCACGGACGCGACACTCGCGGCATTTTCCGCGTCCACCAGTTC GAGAAGGTGGAGCAGTTCGTACTGACCTCCCCACACGACAACAAGTCGTG GGAGATGATGGACGAGATGATCGGGAATGCGGAGCAGTTCTGCCAGTCGC TGGGCATTCCATATCGCGTTGTTAACATCGTTTCCGGTGCCCTCAACCAT GCTGCCTCCAAGAAGCTGGATCTCGAGGCCTGGTTCGGCGGCAGCGGCGC TTACAGGGAACTTGTCTCGTGCTCTAACTGCTTGGACTACCAGGCCCGTC GTCTGCTCGTCCGTTTCGGCCAGACTAAGAAGATGAACGCCGCCGTAGAC TATGTGCACATGCTGAACGCCACGATGTGCGCAGCCACTCGCGTCATCTG CGCCATCCTGGAGACCCATCAGACAGAGACGGGCATCAAGGTGCCGGAGC CATTGAAGAAGTACATGCCGGCGAAGTTCCAGGATGAGATTCCGTTCGTC AAGCCCGCTCCCATTGATCTGGAGTTGGCCGCCGCCGAGAAGCAGAAAGG CAAAAAGGAGAAAACCAAGAAGGACCCTGCCGCCGGTTAAGCCTAAAGTT CACATAATTTACTACGAAATATACTGCTAAACTAAGCTTGCAAAGTCCAC AAAATTTTTGTTACTTATCGACTTATCTAATATTTATGGCATTTATAGAA ACTTTATAACGATTAAACTGGATCAAGCTGTGCTTTGAATGCAAAAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17259-RA | 1911 | CG17259-RA | 170..1911 | 1..1742 | 8710 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 3035141..3036882 | 1742..1 | 8710 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 3035491..3037234 | 1744..1 | 8720 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 3035491..3037234 | 1744..1 | 8720 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 3035141..3036882 | 1..1742 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17259-RA | 1..1506 | 85..1590 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17259-RA | 1..1506 | 85..1590 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17259-RA | 1..1506 | 85..1590 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17259-RA | 1..1506 | 85..1590 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17259-RA | 1..1506 | 85..1590 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17259-RA | 170..1911 | 1..1742 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17259-RA | 170..1911 | 1..1742 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17259-RA | 170..1911 | 1..1742 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17259-RA | 170..1911 | 1..1742 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17259-RA | 170..1911 | 1..1742 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 3035493..3037234 | 1..1742 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 3035493..3037234 | 1..1742 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 3035493..3037234 | 1..1742 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 3035493..3037234 | 1..1742 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 3035493..3037234 | 1..1742 | 100 | Minus |
Translation from 84 to 1589
> LP20978.pep MVLDLDLFRSDKGGNPDLVRENQKKRFKDVALVETVIAKDTEWRQCRHRA DNLNKVKNVCSKVIGEKMKKKEPVGAMSEDLPADVTKDLTEIVAETLQPL TVNQIKQLRVLIDDAMTENQKSLELAEQTRNTSLREVGNHLHESVPVSND EDENRVERTFGDCEKRGKYSHVDLIVMIDGMNAEKGAVVSGGRGYFLTGA AVFLEQALIQHALHLLYARDYVPLYTPFFMRKEVMQEVAQLSQFDEELYK VVGKGSEKAEEVGIDEKYLIATSEQPIAAYHRDEWLPESSLPIKYAGLST CFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAE QFCQSLGIPYRVVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCL DYQARRLLVRFGQTKKMNAAVDYVHMLNATMCAATRVICAILETHQTETG IKVPEPLKKYMPAKFQDEIPFVKPAPIDLELAAAEKQKGKKEKTKKDPAA G*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15510-PA | 501 | GF15510-PA | 1..501 | 1..501 | 2527 | 94.4 | Plus |
Dana\GF22996-PA | 419 | GF22996-PA | 141..396 | 190..461 | 354 | 30 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24463-PA | 501 | GG24463-PA | 1..501 | 1..501 | 2681 | 99 | Plus |
Dere\GG16916-PA | 416 | GG16916-PA | 138..393 | 190..461 | 370 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10337-PA | 504 | GH10337-PA | 1..488 | 1..488 | 2430 | 91.8 | Plus |
Dgri\GH24998-PA | 160 | GH24998-PA | 1..144 | 345..488 | 748 | 94.4 | Plus |
Dgri\GH19144-PA | 436 | GH19144-PA | 114..412 | 136..461 | 361 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SerRS-PB | 501 | CG17259-PB | 1..501 | 1..501 | 2594 | 100 | Plus |
SerRS-PA | 501 | CG17259-PA | 1..501 | 1..501 | 2594 | 100 | Plus |
SerRS-m-PB | 417 | CG4938-PB | 16..394 | 53..461 | 372 | 26.8 | Plus |
SerRS-m-PA | 417 | CG4938-PA | 16..394 | 53..461 | 372 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17096-PA | 501 | GI17096-PA | 1..501 | 1..501 | 2480 | 92.8 | Plus |
Dmoj\GI10857-PA | 407 | GI10857-PA | 14..380 | 78..461 | 398 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19573-PA | 501 | GL19573-PA | 1..501 | 1..501 | 2559 | 96.2 | Plus |
Dper\GL23244-PA | 418 | GL23244-PA | 139..394 | 190..461 | 382 | 32.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14420-PA | 501 | GA14420-PA | 1..501 | 1..501 | 2559 | 96.2 | Plus |
Dpse\GA18540-PA | 418 | GA18540-PA | 139..394 | 190..461 | 382 | 32.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18172-PA | 501 | GM18172-PA | 1..501 | 1..501 | 2691 | 99.4 | Plus |
Dsec\GM24223-PA | 417 | GM24223-PA | 139..394 | 190..461 | 377 | 31.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22783-PA | 175 | GD22783-PA | 1..164 | 1..164 | 867 | 100 | Plus |
Dsim\GD22784-PA | 85 | GD22784-PA | 1..85 | 417..501 | 449 | 100 | Plus |
Dsim\GD19014-PA | 417 | GD19014-PA | 139..394 | 190..461 | 368 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10873-PA | 501 | GJ10873-PA | 1..501 | 1..501 | 2499 | 93.2 | Plus |
Dvir\GJ14464-PA | 427 | GJ14464-PA | 39..403 | 80..461 | 402 | 27.9 | Plus |
Translation from 84 to 1589
> LP20978.hyp MVLDLDLFRSDKGGNPDLVRENQKKRFKDVALVETVIAKDTEWRQCRHRA DNLNKVKNVCSKVIGEKMKKKEPVGAMSEDLPADVTKDLTEIVAETLQPL TVNQIKQLRVLIDDAMTENQKSLELAEQTRNTSLREVGNHLHESVPVSND EDENRVERTFGDCEKRGKYSHVDLIVMIDGMNAEKGAVVSGGRGYFLTGA AVFLEQALIQHALHLLYARDYVPLYTPFFMRKEVMQEVAQLSQFDEELYK VVGKGSEKAEEVGIDEKYLIATSEQPIAAYHRDEWLPESSLPIKYAGLST CFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAE QFCQSLGIPYRVVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCL DYQARRLLVRFGQTKKMNAAVDYVHMLNATMCAATRVICAILETHQTETG IKVPEPLKKYMPAKFQDEIPFVKPAPIDLELAAAEKQKGKKEKTKKDPAA G*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17259-PB | 501 | CG17259-PB | 1..501 | 1..501 | 2594 | 100 | Plus |
CG17259-PA | 501 | CG17259-PA | 1..501 | 1..501 | 2594 | 100 | Plus |
Aats-ser-PB | 417 | CG4938-PB | 16..394 | 53..461 | 372 | 26.8 | Plus |
Aats-ser-PA | 417 | CG4938-PA | 16..394 | 53..461 | 372 | 26.8 | Plus |