BDGP Sequence Production Resources |
Search the DGRC for LP21185
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 211 |
Well: | 85 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4858-RA |
Protein status: | LP21185.pep: gold |
Sequenced Size: | 947 |
Gene | Date | Evidence |
---|---|---|
CG4858 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4858 | 2004-03-05 | Blastp of sequenced clone |
CG4858 | 2008-04-29 | Release 5.5 accounting |
CG4858 | 2008-08-15 | Release 5.9 accounting |
CG4858 | 2008-12-18 | 5.12 accounting |
947 bp (947 high quality bases) assembled on 2004-03-05
GenBank Submission: BT012307
> LP21185.complete ACGCAATCCACGACTTTGCATTGGTTTCGGAATAAATTGCTTTTAAATCG CTTTATAATGCTGGACAAGGTTAAAAATGTTATCGTAGTGCTATCAGGCA AGGGCGGAGTAGGAAAATCCACAGTGAGCACCCAATTATCGCTGGCACTG CGAAAAAACGGATTTAAGGTTGGTCTGCTCGATATAGATCTGTGTGGACC GAGTGTGCCATATCTATTGGGTCTGGAAGGACGGGATATCTTCCAGTGCG ACGATGGATGGGTTCCTGTCTATACAGATGAATCCCAAACCTTGGCGGTG ATGTCCATTGGATTTTTATTGAAGAACCGTGAGGATCCGGTCATTTGGCG TGGTCCCAAAAAGACCATGATGATCCGGCAGTTCCTCACCGACGTCAGGT GGGATGAGCTGGATTACCTAATTATCGATACGCCACCCGGCACTTCGGAT GAGCACATCACCGTAATGGAGTGCCTGAAGGAGGTTGGTTGCCACGGAGC CATAATTGTGACCACACCGCAGGAGGTGGCCCTGGACGATGTACGCAAGG AGATCACCTTCTGCAAGAAGACCGGCATCAATATCCTGGGCATCGTCGAG AATATGAGTGGGTTCGTGTGCCCCCATTGCACCTCGTGCACCAATATATT CTCGTCAAACGGTGGCGTCTCACTGGCCACTTACGCCCAAGTACCACATC TAGGAACTCTGCCCATAGATCCCCGTGTTGGCATTTTGGCGGGCACCACT ACGTCCGTCTTGGATGAGCTTCCGGATTCCACGACAGCGGAGGTGCTGAC GCATATAGTTGAGAAGTTGAAAACGATGTTGGTCTCCTAAATAAATACCA ACATAACAATTTTGTAAATATGATAGCTTGTTTCATTATTCAGTTTATGA ATATAACCATTTTCTTCAGGAAACGATTTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 20515826..20516272 | 167..613 | 2235 | 100 | Plus |
chr3L | 24539361 | chr3L | 20516582..20516900 | 611..929 | 1595 | 100 | Plus |
chr3L | 24539361 | chr3L | 20515587..20515756 | 1..170 | 850 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 20526836..20527282 | 167..613 | 2235 | 100 | Plus |
3L | 28110227 | 3L | 20527592..20527912 | 611..931 | 1605 | 100 | Plus |
3L | 28110227 | 3L | 20526597..20526766 | 1..170 | 850 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 20519936..20520382 | 167..613 | 2235 | 100 | Plus |
3L | 28103327 | 3L | 20520692..20521012 | 611..931 | 1605 | 100 | Plus |
3L | 28103327 | 3L | 20519697..20519866 | 1..170 | 850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 20515587..20515754 | 1..168 | 100 | -> | Plus |
chr3L | 20515828..20516270 | 169..611 | 100 | -> | Plus |
chr3L | 20516583..20516900 | 612..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4858-RA | 1..783 | 58..840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4858-RA | 1..783 | 58..840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4858-RA | 1..783 | 58..840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4858-RA | 1..783 | 58..840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4858-RA | 1..783 | 58..840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4858-RA | 1..783 | 58..840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4858-RA | 1..929 | 1..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4858-RA | 22..950 | 1..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4858-RA | 1..783 | 58..840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4858-RA | 22..950 | 1..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20526597..20526764 | 1..168 | 100 | -> | Plus |
3L | 20526838..20527280 | 169..611 | 100 | -> | Plus |
3L | 20527593..20527910 | 612..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20526597..20526764 | 1..168 | 100 | -> | Plus |
3L | 20526838..20527280 | 169..611 | 100 | -> | Plus |
3L | 20527593..20527910 | 612..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20526597..20526764 | 1..168 | 100 | -> | Plus |
3L | 20526838..20527280 | 169..611 | 100 | -> | Plus |
3L | 20527593..20527910 | 612..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 20519697..20519864 | 1..168 | 100 | -> | Plus |
arm_3L | 20519938..20520380 | 169..611 | 100 | -> | Plus |
arm_3L | 20520693..20521010 | 612..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20519938..20520380 | 169..611 | 100 | -> | Plus |
3L | 20520693..20521010 | 612..929 | 100 | Plus | |
3L | 20519697..20519864 | 1..168 | 100 | -> | Plus |
Translation from 0 to 839
> LP21185.hyp TQSTTLHWFRNKLLLNRFIMLDKVKNVIVVLSGKGGVGKSTVSTQLSLAL RKNGFKVGLLDIDLCGPSVPYLLGLEGRDIFQCDDGWVPVYTDESQTLAV MSIGFLLKNREDPVIWRGPKKTMMIRQFLTDVRWDELDYLIIDTPPGTSD EHITVMECLKEVGCHGAIIVTTPQEVALDDVRKEITFCKKTGINILGIVE NMSGFVCPHCTSCTNIFSSNGGVSLATYAQVPHLGTLPIDPRVGILAGTT TSVLDELPDSTTAEVLTHIVEKLKTMLVS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4858-PA | 260 | CG4858-PA | 1..260 | 20..279 | 1355 | 100 | Plus |
CG17904-PA | 311 | CG17904-PA | 54..306 | 24..273 | 556 | 47.9 | Plus |
CG3262-PE | 293 | CG3262-PE | 38..279 | 24..277 | 361 | 34.3 | Plus |
CG3262-PD | 293 | CG3262-PD | 38..279 | 24..277 | 361 | 34.3 | Plus |
CG3262-PF | 207 | CG3262-PF | 19..193 | 94..277 | 224 | 31 | Plus |
Translation from 57 to 839
> LP21185.pep MLDKVKNVIVVLSGKGGVGKSTVSTQLSLALRKNGFKVGLLDIDLCGPSV PYLLGLEGRDIFQCDDGWVPVYTDESQTLAVMSIGFLLKNREDPVIWRGP KKTMMIRQFLTDVRWDELDYLIIDTPPGTSDEHITVMECLKEVGCHGAII VTTPQEVALDDVRKEITFCKKTGINILGIVENMSGFVCPHCTSCTNIFSS NGGVSLATYAQVPHLGTLPIDPRVGILAGTTTSVLDELPDSTTAEVLTHI VEKLKTMLVS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10354-PA | 261 | GF10354-PA | 1..260 | 1..260 | 1217 | 88.1 | Plus |
Dana\GF20875-PA | 310 | GF20875-PA | 50..305 | 2..254 | 560 | 49.2 | Plus |
Dana\GF22737-PA | 310 | GF22737-PA | 10..195 | 1..193 | 327 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16127-PA | 260 | GG16127-PA | 1..260 | 1..260 | 1333 | 96.9 | Plus |
Dere\GG22765-PA | 311 | GG22765-PA | 51..306 | 2..254 | 520 | 46.9 | Plus |
Dere\GG21464-PA | 294 | GG21464-PA | 38..279 | 5..258 | 345 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14587-PA | 264 | GH14587-PA | 1..257 | 1..257 | 1192 | 86.4 | Plus |
Dgri\GH11560-PA | 311 | GH11560-PA | 51..279 | 2..224 | 563 | 52.8 | Plus |
Dgri\GH13628-PA | 292 | GH13628-PA | 34..274 | 2..251 | 334 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4858-PA | 260 | CG4858-PA | 1..260 | 1..260 | 1355 | 100 | Plus |
CG17904-PA | 311 | CG17904-PA | 54..306 | 5..254 | 556 | 47.9 | Plus |
CG3262-PE | 293 | CG3262-PE | 38..279 | 5..258 | 361 | 34.3 | Plus |
CG3262-PD | 293 | CG3262-PD | 38..279 | 5..258 | 361 | 34.3 | Plus |
CG3262-PF | 207 | CG3262-PF | 19..193 | 75..258 | 224 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13405-PA | 264 | GI13405-PA | 1..254 | 1..254 | 1145 | 84.3 | Plus |
Dmoj\GI17051-PA | 310 | GI17051-PA | 51..310 | 2..258 | 526 | 48.9 | Plus |
Dmoj\GI11769-PA | 297 | GI11769-PA | 34..281 | 2..258 | 343 | 32.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12799-PA | 255 | GL12799-PA | 1..251 | 1..254 | 1115 | 83.1 | Plus |
Dper\GL18780-PA | 311 | GL18780-PA | 51..278 | 2..224 | 559 | 52.6 | Plus |
Dper\GL21144-PA | 299 | GL21144-PA | 44..279 | 5..251 | 321 | 30.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18483-PA | 258 | GA18483-PA | 1..254 | 1..254 | 1156 | 84.6 | Plus |
Dpse\GA14715-PA | 311 | GA14715-PA | 51..278 | 2..224 | 559 | 52.6 | Plus |
Dpse\GA17025-PA | 299 | GA17025-PA | 44..279 | 5..251 | 321 | 30.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22307-PA | 260 | GM22307-PA | 1..260 | 1..260 | 1353 | 98.8 | Plus |
Dsec\GM17199-PA | 311 | GM17199-PA | 51..306 | 2..254 | 526 | 47.3 | Plus |
Dsec\GM18803-PA | 293 | GM18803-PA | 38..279 | 5..258 | 340 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14899-PA | 260 | GD14899-PA | 1..260 | 1..260 | 1342 | 98.1 | Plus |
Dsim\GD24076-PA | 311 | GD24076-PA | 51..278 | 2..224 | 526 | 49.6 | Plus |
Dsim\GD21613-PA | 293 | GD21613-PA | 38..279 | 5..258 | 340 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11530-PA | 266 | GJ11530-PA | 1..257 | 1..257 | 1171 | 83.7 | Plus |
Dvir\GJ17301-PA | 310 | GJ17301-PA | 51..278 | 2..224 | 554 | 53.4 | Plus |
Dvir\GJ13135-PA | 298 | GJ13135-PA | 34..281 | 2..258 | 348 | 32.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12055-PA | 261 | GK12055-PA | 1..257 | 1..257 | 1180 | 86 | Plus |
Dwil\GK24826-PA | 310 | GK24826-PA | 50..278 | 2..225 | 565 | 54.1 | Plus |
Dwil\GK23989-PA | 303 | GK23989-PA | 42..287 | 2..258 | 336 | 31.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23241-PA | 260 | GE23241-PA | 1..260 | 1..260 | 1331 | 96.5 | Plus |
Dyak\GE19695-PA | 260 | GE19695-PA | 1..260 | 1..260 | 1325 | 96.2 | Plus |
Dyak\GE12759-PA | 311 | GE12759-PA | 51..306 | 2..254 | 529 | 47.3 | Plus |
Dyak\GE12953-PA | 293 | GE12953-PA | 38..279 | 5..258 | 338 | 33.1 | Plus |