BDGP Sequence Production Resources |
Search the DGRC for LP21420
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 214 |
Well: | 20 |
Vector: | pOT2 |
Associated Gene/Transcript | CG14767-RB |
Protein status: | LP21420.pep: gold |
Sequenced Size: | 2031 |
Gene | Date | Evidence |
---|---|---|
CG14767-RB | 2010-11-11 | Gleaning Pick By Joe Carlson |
2031 bp assembled on 2011-03-14
GenBank Submission: BT126165.1
> LP21420.complete ATTTTCCACAGCCGCAGTTTCGTGGGGCGTGCAATGTTTAGGATCCACCT CAAGATGGGTCCCCAACGCAACCAGCTCCACAGCAACAACAACAATGGTG CCGCCGGAAGTAGCAGCAGCACCGGAAACCGTCACCTGAAGGAGTTCACC TGCTGCTTCGGCCTGCATGTCCACACGGCCACTTTGATGATCGGATTGTG GCACCTGTTCTTGAACATATTGGCGCTAAGCGTTCTAGCGGTCATATGGC GCAATCCGGAGATGATGGACGAACTGGAAGGTGGCACCCACGACTACACC GTGGATCTGAGTGCACCGGCCCTACCCACGCCCCTTAGCAAGGTCGAACC GCCCTACGCCTACCGTGACCACTCCCTCAACTATCGTAAGCGTTACCAGA ACTTCGATATGGGCGGACTGGTGTGCACCTGCATGATAGCCATTACACTG ATGATGATCTACGGAACCATCAAGGGAAAACCCTCCCACCTGTTGCCGTT CTTCTGTTTGCAATTGTTTGATTTCGCTATTACAACTCTCACCGCCGCTG GATATCTGTGCTACCTGCAGGCCATTCACAGCATCATTGCCGAGTCGCAT CGCTTGCCGTGGCGCGAGAAGCTGCTAGAACTACCACCTGAGGAGCTAGT TGTTGTTGTCCTGGTCGTATTCATCTGCATTGTGTTTCTAAAGGCCTATT GCATTGGTATCGTTTGGCGCTGCTACAAGTACTTGACGCTCCGTCAGCAA CACGTTCGCACCCTGTTCCCCTTCCTGGAGCCACCGACTGGAGTCCACAG TGTTGGCGGAACCTTTGGTGCCGAAGAGCGGTCTTACTCCACTCTGTTGC CCAATTACGATGAAGCGATTGCCCAGTACTTGAAGCAGGCACCACCGCCA TCTTATCAGGTGGCCATGTCAAACTACGAAGAGGGTGAAGACGCAGCTGT TGGAGGTGCGGAGGTTAATCCTTCGGTGGCCCCTCTCTTCGTGGCCCTTG GAGCAGCCACTACCGCGAACGTAGCCTCCAACACGGATGACAACATGGAT AATAACAATGATCAGCCGAACAATAACAACACTATGCATGTCAATGCCAA TACGCCACCAATGCGCCGCAGCGATGCAGCTGTAAACGCTAATGTCGACG AGGAAGCGGACGATTTGGAGGTTATTGACGCTGGCGTTGATGTAATCGGT GGCATTCCGCCTCCTCCGCCCTACAACGACGTTGCCGATGCCCAGGTGCA AGTGCCATCGCAATCGCCGCTGCATCGCCAGCCAAACATCCCGGGACAAG TATTCGGCGGACGCGACGAAAGCCAGGCTTAAACAGTACTTTCGACTGGA TTGCTTCTCATGGCGAGTGGGTTGTGATCAGCGGTGACCACCCCTCTCCC ATCCTCTTCTTGCCCAGATGATCTGGTTTCTGGTCCCTCATTTCGCAGCT ATCATTCCCAGGCACACATACACCTTCTTAATGGTTGCTTCAATGTATTG AACACTGTTTTTAGAAAAACGAAACGCAAACAAGTTTTCGCTATTAGCCA TCGCTCATTATTGTTGTTTAACGTACAACTAAGACGCTCTAGTTGCTGCT AATTTAGTAAACAAAAGCATTAAAGCCAAAAACATATTGTGATGCTGGCG AGGAAAGCATCAATTCCTTTTCGGCCGCATCTGACCCGATTTTAGCTGCA ACAATCTGTTAGAACGTTTTTCATTTGGCCCGAACTAGCCTGAGAAGTTC GGATATTGTAGGCCCAAGTAGTTGTTACCAGAGAGTGTCGCTGGCATTGT AGACACCTTTACGATGTTCTTTGTTTTAAGTTATCTCGTAAGACTATGCA TATTGAATACCGTGTACTGAATTCAGAGCACAGGCAGTCATAATCCATTA ATTATGATGATATTACCAGCAACAGTAAAGTTTTATGTGTGTACAATATC TAAATGTATACTGTGTACTAAATATGCAAAGATATTCGAATAAAAATTAG TTTATATTTAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 4605596..4607068 | 2009..537 | 7350 | 99.9 | Minus |
chr2R | 21145070 | chr2R | 4610836..4611042 | 207..1 | 1035 | 100 | Minus |
chr2R | 21145070 | chr2R | 4607422..4607612 | 397..207 | 955 | 100 | Minus |
chr2R | 21145070 | chr2R | 4607225..4607363 | 536..398 | 695 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 8718015..8719489 | 2011..537 | 7375 | 100 | Minus |
2R | 25286936 | 2R | 8723257..8723463 | 207..1 | 1035 | 100 | Minus |
2R | 25286936 | 2R | 8719843..8720033 | 397..207 | 955 | 100 | Minus |
2R | 25286936 | 2R | 8719646..8719784 | 536..398 | 695 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 8719214..8720688 | 2011..537 | 7375 | 100 | Minus |
2R | 25260384 | 2R | 8724456..8724662 | 207..1 | 1035 | 100 | Minus |
2R | 25260384 | 2R | 8721042..8721232 | 397..207 | 955 | 100 | Minus |
2R | 25260384 | 2R | 8720845..8720983 | 536..398 | 695 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2316..2388 | 61..135 | 127 | 65.3 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 136..196 | 60..119 | 122 | 68.9 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9166..9226 | 60..119 | 122 | 68.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6818..6914 | 64..156 | 114 | 61.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 4605596..4607068 | 537..2009 | 99 | <- | Minus |
chr2R | 4607225..4607363 | 398..536 | 100 | <- | Minus |
chr2R | 4607422..4607611 | 208..397 | 100 | <- | Minus |
chr2R | 4610836..4611042 | 1..207 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14767-RB | 1..1299 | 34..1332 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14767-RC | 1..1299 | 34..1332 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14767-RC | 1..1299 | 34..1332 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14767-RB | 168..2176 | 1..2009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14767-RB | 35..2043 | 1..2009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14767-RB | 35..2043 | 1..2009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8719843..8720032 | 208..397 | 100 | <- | Minus |
2R | 8723257..8723463 | 1..207 | 100 | Minus | |
2R | 8718017..8719489 | 537..2009 | 100 | <- | Minus |
2R | 8719646..8719784 | 398..536 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8719843..8720032 | 208..397 | 100 | <- | Minus |
2R | 8723257..8723463 | 1..207 | 100 | Minus | |
2R | 8718017..8719489 | 537..2009 | 100 | <- | Minus |
2R | 8719646..8719784 | 398..536 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8719843..8720032 | 208..397 | 100 | <- | Minus |
2R | 8723257..8723463 | 1..207 | 100 | Minus | |
2R | 8718017..8719489 | 537..2009 | 100 | <- | Minus |
2R | 8719646..8719784 | 398..536 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 4607151..4607289 | 398..536 | 100 | <- | Minus |
arm_2R | 4607348..4607537 | 208..397 | 100 | <- | Minus |
arm_2R | 4610762..4610968 | 1..207 | 100 | Minus | |
arm_2R | 4605522..4606994 | 537..2009 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8719216..8720688 | 537..2009 | 100 | <- | Minus |
2R | 8720845..8720983 | 398..536 | 100 | <- | Minus |
2R | 8721042..8721231 | 208..397 | 100 | <- | Minus |
2R | 8724456..8724662 | 1..207 | 100 | Minus |
Translation from 0 to 1331
> LP21420.pep IFHSRSFVGRAMFRIHLKMGPQRNQLHSNNNNGAAGSSSSTGNRHLKEFT CCFGLHVHTATLMIGLWHLFLNILALSVLAVIWRNPEMMDELEGGTHDYT VDLSAPALPTPLSKVEPPYAYRDHSLNYRKRYQNFDMGGLVCTCMIAITL MMIYGTIKGKPSHLLPFFCLQLFDFAITTLTAAGYLCYLQAIHSIIAESH RLPWREKLLELPPEELVVVVLVVFICIVFLKAYCIGIVWRCYKYLTLRQQ HVRTLFPFLEPPTGVHSVGGTFGAEERSYSTLLPNYDEAIAQYLKQAPPP SYQVAMSNYEEGEDAAVGGAEVNPSVAPLFVALGAATTANVASNTDDNMD NNNDQPNNNNTMHVNANTPPMRRSDAAVNANVDEEADDLEVIDAGVDVIG GIPPPPPYNDVADAQVQVPSQSPLHRQPNIPGQVFGGRDESQA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12567-PA | 929 | GF12567-PA | 552..929 | 70..443 | 1535 | 87.6 | Plus |
Dana\GF12567-PA | 929 | GF12567-PA | 1..56 | 19..69 | 183 | 64.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10620-PA | 844 | GG10620-PA | 471..844 | 70..443 | 1971 | 97.6 | Plus |
Dere\GG10620-PA | 844 | GG10620-PA | 1..56 | 12..69 | 303 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21353-PA | 457 | GH21353-PA | 1..457 | 12..443 | 1368 | 69.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14767-PB | 432 | CG14767-PB | 1..432 | 12..443 | 2301 | 100 | Plus |
CG14767-PC | 432 | CG14767-PC | 1..432 | 12..443 | 2301 | 100 | Plus |
CG14767-PA | 428 | CG14767-PA | 1..428 | 12..443 | 2264 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20769-PA | 448 | GI20769-PA | 1..448 | 12..443 | 1383 | 72.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17362-PA | 429 | GL17362-PA | 1..429 | 12..443 | 1636 | 81.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15783-PB | 429 | GA15783-PB | 1..429 | 12..443 | 1648 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20666-PA | 432 | GM20666-PA | 1..432 | 12..443 | 2319 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10140-PA | 432 | GD10140-PA | 1..432 | 12..443 | 2324 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20504-PA | 432 | GJ20504-PA | 1..432 | 12..443 | 1448 | 73.6 | Plus |
Translation from 0 to 1331
> LP21420.hyp IFHSRSFVGRAMFRIHLKMGPQRNQLHSNNNNGAAGSSSSTGNRHLKEFT CCFGLHVHTATLMIGLWHLFLNILALSVLAVIWRNPEMMDELEGGTHDYT VDLSAPALPTPLSKVEPPYAYRDHSLNYRKRYQNFDMGGLVCTCMIAITL MMIYGTIKGKPSHLLPFFCLQLFDFAITTLTAAGYLCYLQAIHSIIAESH RLPWREKLLELPPEELVVVVLVVFICIVFLKAYCIGIVWRCYKYLTLRQQ HVRTLFPFLEPPTGVHSVGGTFGAEERSYSTLLPNYDEAIAQYLKQAPPP SYQVAMSNYEEGEDAAVGGAEVNPSVAPLFVALGAATTANVASNTDDNMD NNNDQPNNNNTMHVNANTPPMRRSDAAVNANVDEEADDLEVIDAGVDVIG GIPPPPPYNDVADAQVQVPSQSPLHRQPNIPGQVFGGRDESQA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14767-PB | 432 | CG14767-PB | 1..432 | 12..443 | 2301 | 100 | Plus |
CG14767-PC | 432 | CG14767-PC | 1..432 | 12..443 | 2301 | 100 | Plus |
CG14767-PA | 428 | CG14767-PA | 1..428 | 12..443 | 2264 | 99.1 | Plus |