Clone LP21431 Report

Search the DGRC for LP21431

Clone and Library Details

Library:LP
Tissue Source:Drosophila melanogaster larval-early pupal
Created by:Ling Hong
Date Registered:1998-06-11
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:214
Well:31
Vector:pOT2
Associated Gene/Transcriptr-RA
Protein status:LP21431.pep: gold
Sequenced Size:7054

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
r 2008-04-29 Picked prior to 5.5
r 2008-12-18 5.12 accounting
CG18572 2011-03-01 Transcript Validation

Clone Sequence Records

LP21431.complete Sequence

7054 bp assembled on 2008-10-12

GenBank Submission: BT046159.1

> LP21431.complete
ATTCAGTTGTTCGACTTTGATTTTCCAGACGTTAATTGGAGCCAATTTGC
AAGCAAACACAGTTAAATGCTCAAACTAAACATATCCGAGCAGTGCGAAG
TTAACCAGCTCTAAAAGCGGTGTCGCAAAGTAAACAAATCAAGTTGTCAA
TCGAATTAAAGTCGAAACCAAAACGTGTTCACAACTACAAGTGCAGCAAA
GAGAGAGCTTCGCTTGAAAGTACACGGAATCCAACTCGTCCAATATGGCC
TCTACGGACTGTTACCTCGCACTGGAGGATGGCACAGTGTTGCCCGGGTA
CTCCTTTGGCTACGTTCCCTCGGAGAATGAATCCAAAGTGGGTTTTGGTG
GCGAGGTGGTCTTCCAAACGGGCATGGTTGGCTACACGGAGGCGCTCACG
GATCGATCGTACAGTGGTCAGATCCTGGTGCTTACCTATCCACTGATCGG
TAACTATGGGGTACCAGCGCCGGATGAGGACGAGCACGGACTGCCGCTGC
ACTTCGAGTGGATGAAAGGCGTCGTCCAGGCCACCGCCTTGGTGGTGGGC
GAGGTGGCTGAAGAGGCATTTCACTGGCGCAAATGGAAGACGCTGCCCGA
TTGGCTGAAGCAGCACAAGGTGCCCGGAATTCAAGACATTGATACTCGAG
CCCTGACCAAAAAACTGAGGGAGCAGGGAAGCATGCTAGGCAAGATTGTC
TACGAGAAACCGCCGGTCGAAGGGCTGCCCAAGTCCAGTTTCGTAGATCC
GAACGTCAGGAATTTGGCCAAGGAGTGCAGCGTTAAGGAGCGACAAGTGT
ACGGTAATCCCAATGGCAAGGGACCACGGATCGCCATTCTGGACTGTGGA
CTGAAGCTCAACCAGTTGCGCTGCCTGCTGCAACGTGGCGCCTCGGTGAC
CTTGCTCCCCTGGAGCGCTCGTCTCGAGGATGAGCAGTTCGACGCCCTCT
TTCTGTCTAACGGACCTGGTAATCCGGAGAGCTGCGACCAGATCGTCCAA
CAGGTGAGAAAAGTGATTGAGGAGGGTCAAAAGCCCGTCTTTGGAATATG
TCTGGGTCACCAGCTGTTAGCGAAGGCAATCGGCTGCTCTACTTACAAAA
TGAAGTACGGCAATCGAGGACACAATCTGCCCTGCCTGCACCGAGCAACT
GGACGTTGCCTGATGACGTCGCAGAATCACGGATACGCGGTCGATTTGGA
GCAGTTGCCCGACGGCTGGTCGGAGCTATTTGTGAATGCCAACGACGGCA
CCAACGAGGGCATTGTCCATGCCAGCAAGCCCTACTTTTCGGTTCAGTTC
CATCCGGAGCATCATGCTGGACCGCAGGACACGGAGTTCCTGTTCGATGT
CTTTATGGAGAGCATTCAACAGAAGGATTTGACCATTCCGCAGCTGATCG
AGCAGCGACTGCGTCCGACTACGCCTGCCATAGATTCGGCTCCAGTGATG
CCGCGCAAAGTCCTAATCCTGGGATCCGGTGGACTGTCCATTGGTCAGGC
TGGCGAGTTTGACTACTCCGGATCGCAGGCCATCAAGGCCATGAGGGAAT
CAAACATTCAAACAGTGCTCATCAATCCGAACATAGCCACCGTTCAGACC
TCTAAGGGAATGGCCGACAAGTGCTACTTCCTTCCCCTAACACCTCACTA
TGTTGAGCAGGTGATTAAGTCGGAGCGTCCGAACGGAGTACTGCTCACCT
TTGGCGGCCAGACCGCTCTCAATTGTGGCGTGCAACTGGAGCGAGCCGGA
GTTTTCTCCAAATACAATGTCCGCATTTTGGGCACACCCATCCAGTCGAT
CATCGAGACGGAGGATCGCAAGCTCTTTGCCGAGCGGGTCAACGAGATTG
GCGAGCAGGTGGCGCCATCTGAGGCTGTGTACTCCGTTGCCCAGGCACTG
GATGCGGCCAGTCGCTTGGGTTATCCGGTGATGGCCCGTGCTGCCTTCTC
CCTGGGCGGACTGGGTTCCGGGTTCGCCAACAACGAGGAGGAGCTGCAGA
GCCTGGCCCAACAGGCACTGGCCCACTCGAGCCAACTAATTGTGGACAAA
TCCCTGAAGGGTTGGAAGGAGGTGGAGTACGAGGTGGTGCGCGATGCCTA
CAACAACTGCATTACCGTATGCAACATGGAGAACTTCGATCCCCTGGGCA
TCCACACGGGCGAGAGTATTGTGGTGGCCCCATCGCAGACCCTCTCGGAT
CGCGAGTACCAAATGCTCCGCAGCACCGCCCTGAAGGTTATCCGTCACTT
TGGTGTCGTTGGCGAGTGCAACATTCAGTACGCCTTGTGTCCCCATTCGG
AGCAGTACTACATTATCGAGGTGAACGCCCGACTGTCGCGCAGCTCCGCG
TTGGCCAGCAAGGCCACCGGCTATCCACTGGCCTATGTGGCCGCCAAGTT
GGCTTTGGGATTGCCCCTGCCAGATATCAAGAACTCGGTGACGGGCAATA
CGACGGCCTGCTTTGAGCCATCCCTCGATTACTGTGTGGTCAAGATTCCA
CGCTGGGATTTGGCCAAATTCGTGCGGGTTAGCAAGCACATTGGCAGCTC
GATGAAAAGTGTCGGTGAGGTGATGGCCATCGGTCGCAACTTCGAGGAAG
CGTTCCAAAAAGCCCTGCGCATGGTGGACAGCGATGTGCTTGGCTTTGAT
CCGGATGTGGTTCCGCTTAACAAGGAGCAGCTGGCCGAGCAGCTTTCGGA
GCCGACGGATCGTCGTCCCTTCGTCATTGCCGCTGCTTTGCAATTGGGCA
TGAGCCTTAGGGAGCTGCATCAACTAACCAATATCGATTATTGGTTTCTG
GAAAAGCTGGAAAGGATCATCTTACTGCAGTCCCTGCTCACCCGTAATGG
CAGTCGAACCGATGCCGCTCTGCTGTTGAAGGCCAAGCGTTTTGGTTTTT
CGGACAAGCAGATAGCTAAGTACATTAAGAGCACGGAGCTGGCTGTTCGT
CACCAGCGGCAGGAGTTTGGCATCCGCCCGCATGTCAAGCAGATCGACAC
GGTGGCCGGCGAATGGCCCGCCAGTACCAACTATCTGTACCACACATATA
ACGGAAGCGAGCACGATGTGGACTTCCCCGGCGGACACACTATTGTGGTG
GGCTCGGGCGTCTATCGTATCGGATCCTCAGTGGAGTTTGATTGGTGTGC
CGTGGGCTGCCTGCGCGAATTGAGGAAGCTACAGCGACCCACCATCATGA
TTAACTACAATCCTGAAACGGTTTCCACCGACTACGATATGTGCGATCGC
TTGTATTTCGAGGAGATTAGCTTCGAGGTGGTCATGGACATCTACGAGAT
GGAGAATAGCGAGGGCATCATTCTGTCCATGGGCGGCCAGCTGCCCAACA
ATATAGCCATGGATCTGCATCGCCAGCAGGCGAAGGTGTTGGGCACATCG
CCGGAGTCCATCGACTGTGCCGAAAATCGATTTAAATTCTCGCGCATGCT
GGACAGGAAGGGTATCTTGCAGCCACGCTGGAAGGAGCTGACCAACCTAC
AGTCGGCCATCGAATTTTGCGAGGAGGTTGGCTATCCCTGTCTGGTTAGG
CCATCCTATGTGCTCTCCGGTGCGGCCATGAATGTGGCCTATTCCAATCA
GGATCTGGAGACATATCTGAACGCCGCCTCCGAGGTGAGTCGCGAGCATC
CGGTTGTCATTTCGAAGTTCCTCACCGAGGCCAAGGAGATCGATGTGGAT
GCAGTGGCATCCGATGGACGCATCCTGTGCATGGCTGTTTCGGAGCACGT
GGAGAATGCCGGAGTGCATTCAGGTGATGCCACGCTGGTTACCCCACCGC
AGGATCTGAATGCGGAGACCCTGGAGGCCATTAAACGGATCACATGCGAT
TTGGCCAGCGTACTGGATGTCACCGGTCCCTTCAACATGCAGCTAATTGC
CAAGAACAACGAGCTGAAGGTCATCGAATGCAATGTCCGTGTGTCGCGAT
CCTTCCCCTTCGTCTCCAAGACGCTGGACCACGACTTTGTGGCCACGGCG
ACGCGTGCGATTGTGGGACTCGATGTGGAGCCACTGGATGTGCTCCATGG
CGTCGGCAAGGTGGGCGTCAAGGTGCCACAGTTCAGTTTCTCGCGGCTCG
CGGGCGCGGATGTACAGCTGGGCGTCGAGATGGCCTCCACCGGTGAGGTT
GCCTGCTTCGGGGACAACCGCTATGAGGCGTATCTCAAGGCCATGATGTC
CACGGGCTTCCAGATACCCAAGAACGCCGTACTTCTCTCCATTGGCAGTT
TCAAGCACAAGATGGAGCTGCTGCCTTCCATACGGGATCTGGCCAAGATG
GGTTACAAGCTATACGCTTCCATGGGCACTGGCGACTTTTATGCCGAACA
CGGAGTTAATGTGGAATCCGTGCAGTGGACATTCGACAAGACGACTCCCG
ATGACATCAACGGTGAGCTGAGACACCTGGCCGAGTTCCTGGCCAACAAG
CAGTTCGACCTGGTCATCAACCTCCCGATGAGCGGCGGGGGTGCCAGGCG
GGTCTCCTCGTTCATGACCCATGGCTACCGCACCCGTCGCCTGGCCGTGG
ACTACTCCATTCCGCTGGTGACCGATGTGAAGTGCACCAAGCTTCTGGTA
GAATCAATGCGAATGAACGGTGGCAAGCCGCCAATGAAGACGCACACGGA
TTGTATGACCTCGCGTAGAATTGTGAAGCTGCCGGGCTTCATCGATGTGC
ATGTGCATTTGCGGGAGCCGGGAGCCACGCACAAGGAGGACTTTGCCAGT
GGAACAGCAGCCGCTCTGGCTGGCGGCGTGACCCTCGTGTGCGCCATGCC
CAATACAAATCCCTCGATCGTGGACAGAGAGACGTTCACCCAGTTCCAGG
AGCTGGCCAAAGCGGGAGCTCGATGCGACTATGCCCTGTATGTGGGGGCC
TCGGATGACAATTGGGCGCAGGTCAACGAGCTGGCCAGTCATGCGTGTGG
CCTTAAGATGTACTTAAACGACACTTTCGGCACCCTAAAACTGAGCGACA
TGACCAGCTGGCAGAGGCATCTCAGCCACTGGCCCAAGCGGTCTCCCATC
GTTTGTCATGCGGAGAGGCAGAGCACAGCGGCTGTGATTATGCTGGCCCA
TCTTCTCGACCGTTCGGTTCACATCTGCCATGTGGCGCGAAAGGAGGAGA
TCCAATTGATTCGTTCCGCCAAGGAAAAGGGCGTCAAGGTGACCTGCGAG
GTGTGCCCCCATCACTTGTTCCTCAGCACCAAGGATGTGGAGCGTTTGGG
TCACGGAATGTCCGAGGTAAGGCCATTGCTCTGCTCACCGGAGGATCAAG
AGGCTCTGTGGGAGAATATTGATTACATCGATGTATTTGCCACCGATCAC
GCGCCACACACACTGGCCGAGAAACGTTCGGAGCGTCCACCGCCTGGATT
TCCGGGCGTGGAGACCATTCTGCCGCTCCTCCTGCAGGCTGTTCACGAGG
GTCGTTTGACGATGGAGGACATCAAGAGGAAGTTCCATCGCAATCCAAAA
ATCATCTTCAACCTGCCGGATCAGGCGCAGACCTACGTGGAGGTGGATCT
CGACGAGGAGTGGACCATAACGGGCAATGAGATGAAGAGCAAGTCCGGCT
GGACACCATTTGAGGGCACCAAGGTCAAGGGACGCGTCCACCGGGTGGTT
CTTCGCGGCGAGGTGGCCTTCGTCGATGGCCAAGTGTTGGTGCAGCCCGG
CTTCGGGCAGAATGTGCGCCCCAAACAGAGTCCATTGGCGTCGGAGGCAT
CACAGGATCTGCTGCCCAGCGACAACGATGCCAATGACACCTTTACCCGC
CTCCTCACCTCCGAAGGACCCGGTGGAGGCGTACATGGAATATCGACCAA
GGTGCACTTTGTGGACGGAGCCAACTTCCTGCGCCCCAACTCGCCATCCC
CACGCATCCGTCTGGATTCCGCCAGCAACACCACGCTGCGGGAATACTTG
CAGCGCACTACCAACTCAAATCCGGTGGCCCACTCGCTAATGGGCAAGCA
CATCCTTGCCGTTGACATGTTCAACAAAGATCACCTCAACGACATCTTTA
ACCTGGCACAGCTGCTCAAGCTGCGGGGTACGAAGGATCGTCCGGTGGAC
GAGCTGCTGCCAGGCAAGATCATGGCCAGTGTGTTTTACGAGGTCAGCAC
GCGGACGCAGTGCAGCTTTGCAGCTGCCATGCTGCGTTTGGGAGGGCGAG
TGATCAGCATGGACAACATCACGTCGTCGGTGAAGAAGGGCGAGAGCCTG
GAGGACAGCATCAAGGTTGTGTCCAGCTATGCCGACGTCGTGGTGCTCCG
TCATCCATCGCCCGGAGCTGTAGCGCGCGCAGCGACCTTCTCCCGAAAGC
CGCTTATCAATGCCGGCGATGGCGTCGGTGAGCATCCCACGCAGGCGCTG
CTGGACATCTTCACCATCCGCGAGGAGTTTGGCACTGTGAACGGGCTGAC
CATCACCATGGTGGGCGACTTGAAGAACGGACGGACCGTGCACTCGCTGG
CCCGCCTGCTGACCCTGTACAATGTGAACCTGCAGTATGTGGCGCCGAAT
AGCCTGCAGATGCCCGATGAGGTCGTCCAGTTCGTCCATCAGCGCGGCGT
CAAGCAGTTATTTGCACGCGACCTAAAGAATGTGCTGCCCGACACGGATG
TGCTCTACATGACTCGCATTCAGCGCGAGCGTTTTGATAACGTGGAAGAT
TACGAGAAGTGCTGTGGCCATCTGGTGTTGACGCCCGAGCATATGATGCG
GGCCAAGAAGCGTTCGATTGTTCTGCATCCGCTGCCGCGTCTGAACGAGA
TCAGCCGGGAGATCGACTCGGACCCAAGGGCCGCCTACTTCCGGCAGGCG
GAGTACGGCATGTACATCCGTATGGCCTTGCTGGCCATGGTCGTTGGTGG
ACGCAATACGGCGCTCTAGAGGATTTACCCATGGAAAACCCACAATCTTT
GACTCTCTACTATTATTTTTGTATACTATCTTTTTTATACCACACATGTA
CGCAGCTGCATACGAATATATTTGATCCATTTCGGTTAAAAAAAAAAAAA
AAAA

LP21431.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:10:01
Subject Length Description Subject Range Query Range Score Percent Strand
rudimentary-RA 7440 rudimentary-RA 30..7068 1..7039 35195 100 Plus
rudimentary-RB 4480 rudimentary-RB 12..4374 1..4363 21815 100 Plus
rudimentary.d 4525 rudimentary.d 288..4419 232..4363 20660 100 Plus
rudimentary.d 4525 rudimentary.d 1..231 1..231 1155 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 01:32:10
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 16546910..16550163 1002..4255 16060 99.6 Plus
chrX 22417052 chrX 16555718..16557543 4500..6325 9130 100 Plus
chrX 22417052 chrX 16546076..16546850 232..1006 3845 99.7 Plus
chrX 22417052 chrX 16557620..16558004 6325..6709 1925 100 Plus
chrX 22417052 chrX 16558067..16558396 6708..7037 1650 100 Plus
chrX 22417052 chrX 16545070..16545300 1..231 1155 100 Plus
chrX 22417052 chrX 16554872..16555012 4361..4501 705 100 Plus
chrX 22417052 chrX 16550227..16550336 4254..4363 550 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:58:59 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 01:32:08
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16657219..16660472 1002..4255 16270 100 Plus
X 23542271 X 16666034..16667859 4500..6325 9130 100 Plus
X 23542271 X 16656385..16657159 232..1006 3875 100 Plus
X 23542271 X 16667936..16668320 6325..6709 1925 100 Plus
X 23542271 X 16668383..16668714 6708..7039 1660 100 Plus
X 23542271 X 16655379..16655609 1..231 1155 100 Plus
X 23542271 X 16665188..16665328 4361..4501 705 100 Plus
X 23542271 X 16660536..16660645 4254..4363 550 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:28:01
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 16665317..16668570 1002..4255 16270 100 Plus
X 23527363 X 16674132..16675957 4500..6325 9130 100 Plus
X 23527363 X 16664483..16665257 232..1006 3875 100 Plus
X 23527363 X 16676034..16676418 6325..6709 1925 100 Plus
X 23527363 X 16676481..16676812 6708..7039 1660 100 Plus
X 23527363 X 16663477..16663707 1..231 1155 100 Plus
X 23527363 X 16673286..16673426 4361..4501 705 100 Plus
X 23527363 X 16668634..16668743 4254..4363 550 100 Plus
Blast to na_te.dros performed on 2019-03-16 01:32:08 has no hits.

LP21431.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 01:33:05 Download gff for LP21431.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 16545070..16545300 1..231 100 -> Plus
chrX 16546076..16546847 232..1003 99 -> Plus
chrX 16546912..16550163 1004..4255 99 -> Plus
chrX 16550229..16550333 4256..4360 100 -> Plus
chrX 16554872..16555011 4361..4500 100 -> Plus
chrX 16555719..16557543 4501..6325 100 -> Plus
chrX 16557621..16558004 6326..6709 100 -> Plus
chrX 16558069..16558396 6710..7037 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:38:33 Download gff for LP21431.complete
Subject Subject Range Query Range Percent Splice Strand
r-RA 1..6675 245..6919 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:14:38 Download gff for LP21431.complete
Subject Subject Range Query Range Percent Splice Strand
r-RA 1..6675 245..6919 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:41:09 Download gff for LP21431.complete
Subject Subject Range Query Range Percent Splice Strand
r-RC 1..6675 245..6919 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:35:58 Download gff for LP21431.complete
Subject Subject Range Query Range Percent Splice Strand
r-RA 1..6675 245..6919 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:38:32 Download gff for LP21431.complete
Subject Subject Range Query Range Percent Splice Strand
r-RA 1..7037 1..7037 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:14:38 Download gff for LP21431.complete
Subject Subject Range Query Range Percent Splice Strand
r-RA 1..7037 1..7037 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:41:09 Download gff for LP21431.complete
Subject Subject Range Query Range Percent Splice Strand
r-RA 21..7057 1..7037 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-12 16:28:28 Download gff for LP21431.complete
Subject Subject Range Query Range Percent Splice Strand
r-RA 1..7037 1..7037 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:35:58 Download gff for LP21431.complete
Subject Subject Range Query Range Percent Splice Strand
r-RA 21..7057 1..7037 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:33:05 Download gff for LP21431.complete
Subject Subject Range Query Range Percent Splice Strand
X 16665188..16665327 4361..4500 100 -> Plus
X 16655379..16655609 1..231 100 -> Plus
X 16656385..16657156 232..1003 100 -> Plus
X 16657221..16660472 1004..4255 100 -> Plus
X 16660538..16660642 4256..4360 100 -> Plus
X 16666035..16667859 4501..6325 100 -> Plus
X 16667937..16668320 6326..6709 100 -> Plus
X 16668385..16668712 6710..7037 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:33:05 Download gff for LP21431.complete
Subject Subject Range Query Range Percent Splice Strand
X 16665188..16665327 4361..4500 100 -> Plus
X 16655379..16655609 1..231 100 -> Plus
X 16656385..16657156 232..1003 100 -> Plus
X 16657221..16660472 1004..4255 100 -> Plus
X 16660538..16660642 4256..4360 100 -> Plus
X 16666035..16667859 4501..6325 100 -> Plus
X 16667937..16668320 6326..6709 100 -> Plus
X 16668385..16668712 6710..7037 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:33:05 Download gff for LP21431.complete
Subject Subject Range Query Range Percent Splice Strand
X 16665188..16665327 4361..4500 100 -> Plus
X 16655379..16655609 1..231 100 -> Plus
X 16656385..16657156 232..1003 100 -> Plus
X 16657221..16660472 1004..4255 100 -> Plus
X 16660538..16660642 4256..4360 100 -> Plus
X 16666035..16667859 4501..6325 100 -> Plus
X 16667937..16668320 6326..6709 100 -> Plus
X 16668385..16668712 6710..7037 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:41:09 Download gff for LP21431.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16549412..16549642 1..231 100 -> Plus
arm_X 16550418..16551189 232..1003 100 -> Plus
arm_X 16551254..16554505 1004..4255 100 -> Plus
arm_X 16554571..16554675 4256..4360 100 -> Plus
arm_X 16559221..16559360 4361..4500 100 -> Plus
arm_X 16560068..16561892 4501..6325 100 -> Plus
arm_X 16561970..16562353 6326..6709 100 -> Plus
arm_X 16562418..16562745 6710..7037 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:45:21 Download gff for LP21431.complete
Subject Subject Range Query Range Percent Splice Strand
X 16663477..16663707 1..231 100 -> Plus
X 16664483..16665254 232..1003 100 -> Plus
X 16665319..16668570 1004..4255 100 -> Plus
X 16668636..16668740 4256..4360 100 -> Plus
X 16673286..16673425 4361..4500 100 -> Plus
X 16674133..16675957 4501..6325 100 -> Plus
X 16676035..16676418 6326..6709 100 -> Plus
X 16676483..16676810 6710..7037 100   Plus

LP21431.pep Sequence

Translation from 244 to 6918

> LP21431.pep
MASTDCYLALEDGTVLPGYSFGYVPSENESKVGFGGEVVFQTGMVGYTEA
LTDRSYSGQILVLTYPLIGNYGVPAPDEDEHGLPLHFEWMKGVVQATALV
VGEVAEEAFHWRKWKTLPDWLKQHKVPGIQDIDTRALTKKLREQGSMLGK
IVYEKPPVEGLPKSSFVDPNVRNLAKECSVKERQVYGNPNGKGPRIAILD
CGLKLNQLRCLLQRGASVTLLPWSARLEDEQFDALFLSNGPGNPESCDQI
VQQVRKVIEEGQKPVFGICLGHQLLAKAIGCSTYKMKYGNRGHNLPCLHR
ATGRCLMTSQNHGYAVDLEQLPDGWSELFVNANDGTNEGIVHASKPYFSV
QFHPEHHAGPQDTEFLFDVFMESIQQKDLTIPQLIEQRLRPTTPAIDSAP
VMPRKVLILGSGGLSIGQAGEFDYSGSQAIKAMRESNIQTVLINPNIATV
QTSKGMADKCYFLPLTPHYVEQVIKSERPNGVLLTFGGQTALNCGVQLER
AGVFSKYNVRILGTPIQSIIETEDRKLFAERVNEIGEQVAPSEAVYSVAQ
ALDAASRLGYPVMARAAFSLGGLGSGFANNEEELQSLAQQALAHSSQLIV
DKSLKGWKEVEYEVVRDAYNNCITVCNMENFDPLGIHTGESIVVAPSQTL
SDREYQMLRSTALKVIRHFGVVGECNIQYALCPHSEQYYIIEVNARLSRS
SALASKATGYPLAYVAAKLALGLPLPDIKNSVTGNTTACFEPSLDYCVVK
IPRWDLAKFVRVSKHIGSSMKSVGEVMAIGRNFEEAFQKALRMVDSDVLG
FDPDVVPLNKEQLAEQLSEPTDRRPFVIAAALQLGMSLRELHQLTNIDYW
FLEKLERIILLQSLLTRNGSRTDAALLLKAKRFGFSDKQIAKYIKSTELA
VRHQRQEFGIRPHVKQIDTVAGEWPASTNYLYHTYNGSEHDVDFPGGHTI
VVGSGVYRIGSSVEFDWCAVGCLRELRKLQRPTIMINYNPETVSTDYDMC
DRLYFEEISFEVVMDIYEMENSEGIILSMGGQLPNNIAMDLHRQQAKVLG
TSPESIDCAENRFKFSRMLDRKGILQPRWKELTNLQSAIEFCEEVGYPCL
VRPSYVLSGAAMNVAYSNQDLETYLNAASEVSREHPVVISKFLTEAKEID
VDAVASDGRILCMAVSEHVENAGVHSGDATLVTPPQDLNAETLEAIKRIT
CDLASVLDVTGPFNMQLIAKNNELKVIECNVRVSRSFPFVSKTLDHDFVA
TATRAIVGLDVEPLDVLHGVGKVGVKVPQFSFSRLAGADVQLGVEMASTG
EVACFGDNRYEAYLKAMMSTGFQIPKNAVLLSIGSFKHKMELLPSIRDLA
KMGYKLYASMGTGDFYAEHGVNVESVQWTFDKTTPDDINGELRHLAEFLA
NKQFDLVINLPMSGGGARRVSSFMTHGYRTRRLAVDYSIPLVTDVKCTKL
LVESMRMNGGKPPMKTHTDCMTSRRIVKLPGFIDVHVHLREPGATHKEDF
ASGTAAALAGGVTLVCAMPNTNPSIVDRETFTQFQELAKAGARCDYALYV
GASDDNWAQVNELASHACGLKMYLNDTFGTLKLSDMTSWQRHLSHWPKRS
PIVCHAERQSTAAVIMLAHLLDRSVHICHVARKEEIQLIRSAKEKGVKVT
CEVCPHHLFLSTKDVERLGHGMSEVRPLLCSPEDQEALWENIDYIDVFAT
DHAPHTLAEKRSERPPPGFPGVETILPLLLQAVHEGRLTMEDIKRKFHRN
PKIIFNLPDQAQTYVEVDLDEEWTITGNEMKSKSGWTPFEGTKVKGRVHR
VVLRGEVAFVDGQVLVQPGFGQNVRPKQSPLASEASQDLLPSDNDANDTF
TRLLTSEGPGGGVHGISTKVHFVDGANFLRPNSPSPRIRLDSASNTTLRE
YLQRTTNSNPVAHSLMGKHILAVDMFNKDHLNDIFNLAQLLKLRGTKDRP
VDELLPGKIMASVFYEVSTRTQCSFAAAMLRLGGRVISMDNITSSVKKGE
SLEDSIKVVSSYADVVVLRHPSPGAVARAATFSRKPLINAGDGVGEHPTQ
ALLDIFTIREEFGTVNGLTITMVGDLKNGRTVHSLARLLTLYNVNLQYVA
PNSLQMPDEVVQFVHQRGVKQLFARDLKNVLPDTDVLYMTRIQRERFDNV
EDYEKCCGHLVLTPEHMMRAKKRSIVLHPLPRLNEISREIDSDPRAAYFR
QAEYGMYIRMALLAMVVGGRNTAL*

LP21431.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:46:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21836-PA 2233 GF21836-PA 5..2233 3..2224 10742 88.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:46:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19065-PA 2224 GG19065-PA 1..2224 1..2224 11354 94.4 Plus
Dere\GG19159-PA 484 GG19159-PA 61..464 1476..1822 230 25.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:46:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12789-PA 2225 GH12789-PA 1..2225 1..2224 9836 81.6 Plus
Dgri\GH17725-PA 546 GH17725-PA 113..526 1476..1822 224 24 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:07:24
Subject Length Description Subject Range Query Range Score Percent Strand
r-PE 2224 CG18572-PE 1..2224 1..2224 11564 100 Plus
r-PD 2224 CG18572-PD 1..2224 1..2224 11564 100 Plus
r-PA 2224 CG18572-PA 1..2224 1..2224 11564 100 Plus
PCB-PB 1181 CG1516-PB 40..362 404..728 167 20.7 Plus
PCB-PA 1181 CG1516-PA 40..362 404..728 167 20.7 Plus
PCB-PD 1181 CG1516-PD 40..362 404..728 167 20.7 Plus
PCB-PE 1181 CG1516-PE 40..362 404..728 167 20.7 Plus
PCB-PG 1181 CG1516-PG 40..362 404..728 167 20.7 Plus
PCB-PM 1197 CG1516-PM 40..362 404..728 167 20.7 Plus
PCB-PL 1197 CG1516-PL 40..362 404..728 167 20.7 Plus
PCB-PK 1197 CG1516-PK 40..362 404..728 167 20.7 Plus
PCB-PJ 1197 CG1516-PJ 40..362 404..728 167 20.7 Plus
PCB-PI 1197 CG1516-PI 40..362 404..728 167 20.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:46:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15230-PA 2220 GI15230-PA 1..2220 1..2224 9921 82.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:46:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20254-PA 2216 GL20254-PA 680..2216 688..2224 7228 87.1 Plus
Dper\GL20254-PA 2216 GL20254-PA 1..538 1..544 2407 81.7 Plus
Dper\GL20254-PA 2216 GL20254-PA 944..1312 406..791 347 25.2 Plus
Dper\GL20254-PA 2216 GL20254-PA 401..530 950..1073 164 30 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:46:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14996-PA 2238 GA14996-PA 1..2238 1..2224 10281 85.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:46:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13455-PA 1847 GM13455-PA 1..1693 1..1693 9030 98.8 Plus
Dsec\GM22893-PA 485 GM22893-PA 61..465 1476..1822 175 24.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:46:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17297-PA 1233 GD17297-PA 370..1226 517..1373 4557 99.1 Plus
Dsim\r-PA 866 GD24842-PA 9..866 1373..2224 4303 92.1 Plus
Dsim\GD17294-PA 331 GD17294-PA 1..219 1..219 1145 95.4 Plus
Dsim\GD17297-PA 1233 GD17297-PA 802..1170 406..791 343 25.8 Plus
Dsim\GD17391-PA 485 GD17391-PA 61..465 1476..1822 178 24.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:46:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18689-PA 2226 GJ18689-PA 1..2226 1..2224 9965 82.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:46:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19926-PA 2207 GK19926-PA 2..2205 4..2223 9812 82.4 Plus
Dwil\GK20004-PA 494 GK20004-PA 62..474 1476..1822 218 23.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:46:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17287-PA 2184 GE17287-PA 1..2184 44..2224 11153 94.9 Plus
Dyak\GE17722-PA 484 GE17722-PA 61..464 1476..1822 197 24.6 Plus

LP21431.hyp Sequence

Translation from 244 to 6918

> LP21431.hyp
MASTDCYLALEDGTVLPGYSFGYVPSENESKVGFGGEVVFQTGMVGYTEA
LTDRSYSGQILVLTYPLIGNYGVPAPDEDEHGLPLHFEWMKGVVQATALV
VGEVAEEAFHWRKWKTLPDWLKQHKVPGIQDIDTRALTKKLREQGSMLGK
IVYEKPPVEGLPKSSFVDPNVRNLAKECSVKERQVYGNPNGKGPRIAILD
CGLKLNQLRCLLQRGASVTLLPWSARLEDEQFDALFLSNGPGNPESCDQI
VQQVRKVIEEGQKPVFGICLGHQLLAKAIGCSTYKMKYGNRGHNLPCLHR
ATGRCLMTSQNHGYAVDLEQLPDGWSELFVNANDGTNEGIVHASKPYFSV
QFHPEHHAGPQDTEFLFDVFMESIQQKDLTIPQLIEQRLRPTTPAIDSAP
VMPRKVLILGSGGLSIGQAGEFDYSGSQAIKAMRESNIQTVLINPNIATV
QTSKGMADKCYFLPLTPHYVEQVIKSERPNGVLLTFGGQTALNCGVQLER
AGVFSKYNVRILGTPIQSIIETEDRKLFAERVNEIGEQVAPSEAVYSVAQ
ALDAASRLGYPVMARAAFSLGGLGSGFANNEEELQSLAQQALAHSSQLIV
DKSLKGWKEVEYEVVRDAYNNCITVCNMENFDPLGIHTGESIVVAPSQTL
SDREYQMLRSTALKVIRHFGVVGECNIQYALCPHSEQYYIIEVNARLSRS
SALASKATGYPLAYVAAKLALGLPLPDIKNSVTGNTTACFEPSLDYCVVK
IPRWDLAKFVRVSKHIGSSMKSVGEVMAIGRNFEEAFQKALRMVDSDVLG
FDPDVVPLNKEQLAEQLSEPTDRRPFVIAAALQLGMSLRELHQLTNIDYW
FLEKLERIILLQSLLTRNGSRTDAALLLKAKRFGFSDKQIAKYIKSTELA
VRHQRQEFGIRPHVKQIDTVAGEWPASTNYLYHTYNGSEHDVDFPGGHTI
VVGSGVYRIGSSVEFDWCAVGCLRELRKLQRPTIMINYNPETVSTDYDMC
DRLYFEEISFEVVMDIYEMENSEGIILSMGGQLPNNIAMDLHRQQAKVLG
TSPESIDCAENRFKFSRMLDRKGILQPRWKELTNLQSAIEFCEEVGYPCL
VRPSYVLSGAAMNVAYSNQDLETYLNAASEVSREHPVVISKFLTEAKEID
VDAVASDGRILCMAVSEHVENAGVHSGDATLVTPPQDLNAETLEAIKRIT
CDLASVLDVTGPFNMQLIAKNNELKVIECNVRVSRSFPFVSKTLDHDFVA
TATRAIVGLDVEPLDVLHGVGKVGVKVPQFSFSRLAGADVQLGVEMASTG
EVACFGDNRYEAYLKAMMSTGFQIPKNAVLLSIGSFKHKMELLPSIRDLA
KMGYKLYASMGTGDFYAEHGVNVESVQWTFDKTTPDDINGELRHLAEFLA
NKQFDLVINLPMSGGGARRVSSFMTHGYRTRRLAVDYSIPLVTDVKCTKL
LVESMRMNGGKPPMKTHTDCMTSRRIVKLPGFIDVHVHLREPGATHKEDF
ASGTAAALAGGVTLVCAMPNTNPSIVDRETFTQFQELAKAGARCDYALYV
GASDDNWAQVNELASHACGLKMYLNDTFGTLKLSDMTSWQRHLSHWPKRS
PIVCHAERQSTAAVIMLAHLLDRSVHICHVARKEEIQLIRSAKEKGVKVT
CEVCPHHLFLSTKDVERLGHGMSEVRPLLCSPEDQEALWENIDYIDVFAT
DHAPHTLAEKRSERPPPGFPGVETILPLLLQAVHEGRLTMEDIKRKFHRN
PKIIFNLPDQAQTYVEVDLDEEWTITGNEMKSKSGWTPFEGTKVKGRVHR
VVLRGEVAFVDGQVLVQPGFGQNVRPKQSPLASEASQDLLPSDNDANDTF
TRLLTSEGPGGGVHGISTKVHFVDGANFLRPNSPSPRIRLDSASNTTLRE
YLQRTTNSNPVAHSLMGKHILAVDMFNKDHLNDIFNLAQLLKLRGTKDRP
VDELLPGKIMASVFYEVSTRTQCSFAAAMLRLGGRVISMDNITSSVKKGE
SLEDSIKVVSSYADVVVLRHPSPGAVARAATFSRKPLINAGDGVGEHPTQ
ALLDIFTIREEFGTVNGLTITMVGDLKNGRTVHSLARLLTLYNVNLQYVA
PNSLQMPDEVVQFVHQRGVKQLFARDLKNVLPDTDVLYMTRIQRERFDNV
EDYEKCCGHLVLTPEHMMRAKKRSIVLHPLPRLNEISREIDSDPRAAYFR
QAEYGMYIRMALLAMVVGGRNTAL*

LP21431.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:31:54
Subject Length Description Subject Range Query Range Score Percent Strand
r-PE 2224 CG18572-PE 1..2224 1..2224 11564 100 Plus
r-PD 2224 CG18572-PD 1..2224 1..2224 11564 100 Plus
r-PA 2224 CG18572-PA 1..2224 1..2224 11564 100 Plus
CG1516-PB 1181 CG1516-PB 40..362 404..728 167 20.7 Plus
CG1516-PA 1181 CG1516-PA 40..362 404..728 167 20.7 Plus