BDGP Sequence Production Resources |
Search the DGRC for LP21778
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 217 |
Well: | 78 |
Vector: | pOT2 |
Associated Gene/Transcript | CG16758-RE |
Protein status: | LP21778.pep: gold |
Sequenced Size: | 1182 |
Gene | Date | Evidence |
---|---|---|
CG16758-RE | 2010-11-11 | Gleaning Pick By Joe Carlson |
1182 bp assembled on 2010-12-09
GenBank Submission: BT125825.1
> LP21778.complete TTCGTTCGATACCCAAAAACTATATCCCTCGGCCCCAAAATGTGTAACGC CAATTGCTGTTCGAATCCCAAAGGCAAGGCTGGCACCAAAACCGCCATCA ATAATACAAATTGGCCAGATATCATACCAACTCCAGAAAGTCTGCTGTAT CCCTATGAGGTCATCGAGGAGATCGCCGACTTCATTACCAAGGGGTCCGG CATGCGCCCCAAGATCGGCATCATCTGCGGCTCTGGGCTAGGCTCATTGG CCGATATGATCCAGGACCCGAAGATCTTCGAGTATGAGAAGATCCCCAAC TTCCCGGTATCTACAGTTGAGGGCCATGCCGGACGACTGGTGGTCGGCAC ACTCGAGGGCGCCACTGTGATGGCGATGCAGGGCAGGTTCCACTTCTACG AGGGCTATCCGCTGGCCAAGTGCTCAATGCCGGTTCGCGTGATGAAGCTG TGCGGTGTGGAATACCTGTTCGCCACCAATGCGGCTGGTGGAATCAATCC ACGGTTCGCGGTGGGCGACATCATGCTGATGCATGACCATGTCAACATGC TGGGCTTTGCCGGAAATTCTCCGCTCCAGGGACCCAATGACCCACGCTTC GGACCCCGCTTTCCCGCCCTGGTGAACTCGTACAACAAGGACCTAATCAA CAAGGCCATCGAGATCGCCAAGGCCATGGGCATAGAGTCCAACATTCACG TCGGCGTATACTCCTGTCTGGGTGGTCCCAACTACGAGACCATCGCCGAG CTGAAGGCCCTGCGCATGATGGGCGTGGATGCGGTGGGCATGTCCACCGT ACATGAGGTCATCACTGCACGGCACTGCGACATGAAGGTATTCGCCTTCA GCCTCATCACAAATAAGTGCGCCACCGAGTACAGCGATAAGAAGGACGAT GAGGCCAACCACGATGAGGTTATGGCTGTGGCCAAGAACAGGCAAAAGGC CTGCTGCGAACTGGTCTCCCGACTCATCCGGGAAATCCACTTGGCATCCG CTTAAGTAGCGAAGCGAAGAAGTAGCGTTGGATTCTAAATTTAAAAATAG TTAATTCTCTGAGCTCGCATCTAAGACTCACATGACACGGATTGTCCAAA ATCTTACAGTATAGGCCTAGGGAATAGTTTAACTAAATTATGTAAAATAA ACTAGCTATATCACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 2499201..2499974 | 920..147 | 3870 | 100 | Minus |
chr3L | 24539361 | chr3L | 2498890..2499137 | 1164..917 | 1240 | 100 | Minus |
chr3L | 24539361 | chr3L | 2501900..2502048 | 149..1 | 745 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 2499689..2500462 | 920..147 | 3870 | 100 | Minus |
3L | 28103327 | 3L | 2499376..2499625 | 1166..917 | 1250 | 100 | Minus |
3L | 28103327 | 3L | 2502388..2502536 | 149..1 | 745 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 2498890..2499135 | 919..1164 | 100 | <- | Minus |
chr3L | 2499203..2499974 | 147..918 | 100 | <- | Minus |
chr3L | 2501903..2502048 | 1..146 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16758-RE | 1..966 | 40..1005 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16758-RE | 1..966 | 40..1005 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16758-RE | 1..966 | 40..1005 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16758-RE | 280..1443 | 1..1164 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16758-RE | 280..1443 | 1..1164 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16758-RE | 280..1443 | 1..1164 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2499378..2499623 | 919..1164 | 100 | <- | Minus |
3L | 2499691..2500462 | 147..918 | 100 | <- | Minus |
3L | 2502391..2502536 | 1..146 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2499378..2499623 | 919..1164 | 100 | <- | Minus |
3L | 2499691..2500462 | 147..918 | 100 | <- | Minus |
3L | 2502391..2502536 | 1..146 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2499378..2499623 | 919..1164 | 100 | <- | Minus |
3L | 2499691..2500462 | 147..918 | 100 | <- | Minus |
3L | 2502391..2502536 | 1..146 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 2499378..2499623 | 919..1164 | 100 | <- | Minus |
arm_3L | 2499691..2500462 | 147..918 | 100 | <- | Minus |
arm_3L | 2502391..2502536 | 1..146 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2499378..2499623 | 919..1164 | 100 | <- | Minus |
3L | 2499691..2500462 | 147..918 | 100 | <- | Minus |
3L | 2502391..2502536 | 1..146 | 100 | Minus |
Translation from 0 to 1004
> LP21778.hyp FVRYPKTISLGPKMCNANCCSNPKGKAGTKTAINNTNWPDIIPTPESLLY PYEVIEEIADFITKGSGMRPKIGIICGSGLGSLADMIQDPKIFEYEKIPN FPVSTVEGHAGRLVVGTLEGATVMAMQGRFHFYEGYPLAKCSMPVRVMKL CGVEYLFATNAAGGINPRFAVGDIMLMHDHVNMLGFAGNSPLQGPNDPRF GPRFPALVNSYNKDLINKAIEIAKAMGIESNIHVGVYSCLGGPNYETIAE LKALRMMGVDAVGMSTVHEVITARHCDMKVFAFSLITNKCATEYSDKKDD EANHDEVMAVAKNRQKACCELVSRLIREIHLASA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG16758-PE | 321 | CG16758-PE | 1..321 | 14..334 | 1699 | 100 | Plus |
CG16758-PG | 372 | CG16758-PG | 38..372 | 7..334 | 1568 | 90.5 | Plus |
CG16758-PF | 328 | CG16758-PF | 1..328 | 14..334 | 1561 | 91.8 | Plus |
CG16758-PH | 396 | CG16758-PH | 38..396 | 7..334 | 1533 | 84.5 | Plus |
CG16758-PD | 329 | CG16758-PD | 3..329 | 11..334 | 1509 | 90.9 | Plus |
Translation from 0 to 1004
> LP21778.pep FVRYPKTISLGPKMCNANCCSNPKGKAGTKTAINNTNWPDIIPTPESLLY PYEVIEEIADFITKGSGMRPKIGIICGSGLGSLADMIQDPKIFEYEKIPN FPVSTVEGHAGRLVVGTLEGATVMAMQGRFHFYEGYPLAKCSMPVRVMKL CGVEYLFATNAAGGINPRFAVGDIMLMHDHVNMLGFAGNSPLQGPNDPRF GPRFPALVNSYNKDLINKAIEIAKAMGIESNIHVGVYSCLGGPNYETIAE LKALRMMGVDAVGMSTVHEVITARHCDMKVFAFSLITNKCATEYSDKKDD EANHDEVMAVAKNRQKACCELVSRLIREIHLASA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24862-PA | 418 | GF24862-PA | 39..417 | 14..334 | 1474 | 75.7 | Plus |
Dana\GF11825-PA | 337 | GF11825-PA | 1..327 | 14..330 | 661 | 40.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14512-PA | 351 | GG14512-PA | 27..350 | 9..333 | 1504 | 88 | Plus |
Dere\GG20005-PA | 338 | GG20005-PA | 1..336 | 14..331 | 679 | 41.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15756-PA | 390 | GH15756-PA | 41..387 | 14..330 | 1450 | 79.8 | Plus |
Dgri\GH20577-PA | 323 | GH20577-PA | 1..320 | 14..330 | 739 | 45.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG16758-PE | 321 | CG16758-PE | 1..321 | 14..334 | 1699 | 100 | Plus |
CG16758-PG | 372 | CG16758-PG | 38..372 | 7..334 | 1568 | 90.5 | Plus |
CG16758-PF | 328 | CG16758-PF | 1..328 | 14..334 | 1561 | 91.8 | Plus |
CG16758-PH | 396 | CG16758-PH | 38..396 | 7..334 | 1533 | 84.5 | Plus |
CG16758-PD | 329 | CG16758-PD | 3..329 | 11..334 | 1509 | 90.9 | Plus |
CG16758-PB | 353 | CG16758-PB | 29..353 | 9..334 | 1495 | 89.6 | Plus |
CG18128-PA | 339 | CG18128-PA | 1..337 | 14..331 | 671 | 41.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12534-PA | 392 | GI12534-PA | 42..389 | 14..330 | 1452 | 79 | Plus |
Dmoj\GI19771-PA | 323 | GI19771-PA | 1..320 | 14..330 | 690 | 41 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17590-PA | 330 | GL17590-PA | 1..327 | 14..330 | 777 | 47.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14131-PA | 396 | GA14131-PA | 64..396 | 18..333 | 1417 | 79.7 | Plus |
Dpse\GA14805-PA | 333 | GA14805-PA | 1..330 | 14..330 | 765 | 47 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14117-PA | 396 | GM14117-PA | 38..396 | 7..334 | 1552 | 83.4 | Plus |
Dsec\GM15517-PA | 339 | GM15517-PA | 1..337 | 14..331 | 673 | 41 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13387-PA | 396 | GD13387-PA | 38..396 | 7..334 | 1555 | 83.7 | Plus |
Dsim\GD25021-PA | 339 | GD25021-PA | 1..337 | 14..331 | 682 | 41.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16051-PA | 408 | GJ16051-PA | 50..408 | 4..333 | 1468 | 78.6 | Plus |
Dvir\GJ18292-PA | 325 | GJ18292-PA | 1..322 | 14..330 | 800 | 48.9 | Plus |