Clone LP22035 Report

Search the DGRC for LP22035

Clone and Library Details

Library:LP
Tissue Source:Drosophila melanogaster larval-early pupal
Created by:Ling Hong
Date Registered:1998-06-11
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:220
Well:35
Vector:pOT2
Associated Gene/TranscriptCG7705-RA
Protein status:LP22035.pep: gold
Sequenced Size:2306

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7705-RA 2010-11-11 Gleaning Pick By Joe Carlson

Clone Sequence Records

LP22035.complete Sequence

2306 bp assembled on 2011-01-10

GenBank Submission: BT125891.1

> LP22035.complete
TGAAACATGCAGGAGCTCAAGCAACGTTTTGAGCGACGCCAGTTGGCGGA
TGACCTGAAACAAAAACAGGTAATCCAGGATCATCTGCTGCAGAAAATCC
TGTACTCAAAGCGCCTGCTGGTGGACCATGTGGAGGCACTGGAGCACTGC
ATGCAGGAGCTGCAGACAGCCTCCAGTGCGAGTTCCGGCCGGCAATTGCT
GACGACGAGGAACGCCTGCCTGATATTGGGTGGCACTCTGTTGGAGCACC
TGATAACCCCACGGGGCATCCGGTACACCATGGTTCCATCCATCCTCATT
TCGGGTACCTTTGCTGCACTGTTCGCTGTGAAGAGCGTCTTCGTTTGCCG
CAACAAAATCGTGGAACGGAAGTTGGAGCAACTGGTCAAGACCATCGATG
AGTTCGGCAACTGCATCCGTCGAAATATGACGTACTTTCAGGAGATCATC
ATCATGAAACAGGCCGAGCTCATAGAATCCCGTCAAATTGAGCGCGCTTG
GGATTGCATAACGGCCGCCAAGGAGGTTACCGAAATCCTGTACGATGCCA
CCCGAAAACTGGAGACGGACTATCCCCTGCCGACAAAGTACAGCGCCTAC
TATGCGCCCATGGAAGAACTGCGGGAGTGCGAGTACTTCAAGAACAATGT
CACGGACTACAGTCCCAAGCACATAAAAGACTTTCACAACATCTTCGCCT
ATGTGCAGTCACAATACCTGCTCCGGCTGGCACTCACCATCACAACTCGT
CCCTCGATCTCTCAGCTGAGCGAGGATCTGGTGAAAATCGACAGCCTGGT
GAGGCAGTTGGTACAAGAGGAGGAGCAGCACTTCAGTAATCTAGCATTAG
CCCTGCAGAACAAGAAGCAATTGGAACTGGCTGAGCTGAATGCGACTAGA
GCAGAGCAACAGCAGAGTGGACCAATTGCTGTGCTGCAGCACTCCTCGCT
AAAACTAAGCGCCTGCATGGTGGCCGTGGCCGCAGAATGTCAAGCTCTGG
ACGTGACTCTTCAAAAACTCACTGTCACAGAGGCGGCAAAAAAGAACAAC
TCCAAGGAGCTGGTGGCTGTGGCCAATAATATGCATGGCATCGAAAATGC
CTTGGCCGTTTGCTGTGATGATTTCCAGCGATTGATGCTGGTCTACAACA
AGTTCTTGCACAGTCAGCTGGATTTGGAAGGAGAGTTGCCGAAGCCCAAG
CAGGATCTCGACGATGAATTCCCCGAGAGCATTCTTAGGGTTGAGTTCTC
GCAGAACGTGGATGCTCCGCAGCAGAGGGATGACTTTTATGCATACATGT
ACGATGAAAACGAGGAGCAGCACTTTGAAGCTGAGCAGAATGCACCGTTT
CCCTCGCCGGAAAAGGAACTGCTTAACTTCGAGAAGCGTATTACCAAGGG
AAGGTTTAAGCCTGTCCTCAAACAGCTGAAAGATCGCATCGATCCCATCA
GACAAGTTATGCTGGAAAAGGAGCGTGAGGTTCTGGCCTCTAAGGGCATA
AATGTGGACGAGCTGTTTGGCAAAATGGAAAGAGTCGAGCAGCAGCAGGA
GGACAATCGCTTGGCGGATGCCGCACCCTTACCTGTCTACGAATCCTCCA
GCAACTCAGATTCGGACTCTGCTGACGAAGAGGCATTCAGGCGACGCAGC
AAACAGCACAAGGAGCGTGATAATTTTGCTGAAATGCGTCAATTTCTTGC
TCAGAAGCAGGCTATTAATCTGTTTAAGCTACCACCACCACCTGTGGCCG
CCGGTGGGGAGGAGCTGCTTGAAAGTGAATGCTAGACGGGCTGGCTGGCT
GTTTGTTTTGTTGTTCACTAGCCTGTTATCTGGATATTTGCTCTGAATAG
TTTAAGCTTTTATCATTTATCTAGCCAATTGGAGAGATAGACCGCTCGCC
AAGCGACGCCACATCACCCCGAACACAACTTTCTGCCTTTCGGTTGTTCC
TCGTTTTGATGTTCCCTACCATTTTTATAACTAAATAAAACATAGCAAAA
CAAAATAAAACAAAGCAATGAATAAATGTTATTAAGTAGGCCAACTCTAC
ATAATACATATGTGAAAGCAATTGGAAAAAATTCATTTAAACTATTTGAA
TCGGCAATTCGTTTTGACACTTGCGTTTAAGGAACTTAATTACACTTTTA
ATTAAAAATCATTGTTAAAAAAAAAACATAAGTTTGGCAATCACGTTACC
GATATATGTATACTCTATGTAAAGAACTGTAATTGAAATTAAAAATCTTT
TATTACACACTAATGTGCGGATCTTAAGTACAATACACAAAAAAAAAAAA
AAAAAA

LP22035.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 01:28:33
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 14498749..14500358 2288..679 8035 99.9 Minus
chr3R 27901430 chr3R 14501013..14501426 476..63 2025 99.3 Minus
chr3R 27901430 chr3R 14500752..14500954 679..477 1000 99.5 Minus
chr3R 27901430 chr3R 14501486..14501537 71..20 260 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 01:28:31
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18674623..18676235 2291..679 8065 100 Minus
3R 32079331 3R 18676890..18677303 476..63 2055 99.8 Minus
3R 32079331 3R 18676629..18676831 679..477 1015 100 Minus
3R 32079331 3R 18677363..18677414 71..20 260 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:05:02
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 18415454..18417066 2291..679 8065 100 Minus
3R 31820162 3R 18417721..18418134 476..63 2055 99.7 Minus
3R 31820162 3R 18417460..18417662 679..477 1015 100 Minus
3R 31820162 3R 18418194..18418245 71..20 260 100 Minus
Blast to na_te.dros performed 2019-03-17 01:28:32
Subject Length Description Subject Range Query Range Score Percent Strand
ZAM 8435 ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). 1707..1831 1984..2113 123 60.3 Plus
1731 4648 1731 DMTN1731 4648bp Derived from X07656 (g8700) (Rel. 36, Last updated, Version 6). 1751..1796 1288..1333 122 73.9 Plus
Fw2 3961 Fw2 FW2 3961bp 1430..1494 114..180 114 65.7 Plus

LP22035.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 01:29:41 Download gff for LP22035.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 14498749..14500358 679..2288 97 <- Minus
chr3R 14500753..14500954 477..678 99 <- Minus
chr3R 14501013..14501419 70..476 99 <- Minus
chr3R 14501488..14501535 22..69 100 <- Minus
chr3R 14501602..14501622 1..21 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-01-11 10:26:08 Download gff for LP22035.complete
Subject Subject Range Query Range Percent Splice Strand
CG7705-RA 1..1779 7..1785 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:39:55 Download gff for LP22035.complete
Subject Subject Range Query Range Percent Splice Strand
CG7705-RA 1..1779 7..1785 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:59:03 Download gff for LP22035.complete
Subject Subject Range Query Range Percent Splice Strand
CG7705-RA 1..1779 7..1785 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:26:08 Download gff for LP22035.complete
Subject Subject Range Query Range Percent Splice Strand
CG7705-RA 58..2317 1..2260 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:39:55 Download gff for LP22035.complete
Subject Subject Range Query Range Percent Splice Strand
CG7705-RA 58..2317 1..2260 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:59:03 Download gff for LP22035.complete
Subject Subject Range Query Range Percent Splice Strand
CG7705-RA 41..2328 1..2288 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:29:41 Download gff for LP22035.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18676630..18676831 477..678 100 <- Minus
3R 18674626..18676235 679..2288 100 <- Minus
3R 18676890..18677296 70..476 100 <- Minus
3R 18677365..18677412 22..69 100 <- Minus
3R 18677479..18677499 1..21 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:29:41 Download gff for LP22035.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18676630..18676831 477..678 100 <- Minus
3R 18674626..18676235 679..2288 100 <- Minus
3R 18676890..18677296 70..476 100 <- Minus
3R 18677365..18677412 22..69 100 <- Minus
3R 18677479..18677499 1..21 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:29:41 Download gff for LP22035.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18676630..18676831 477..678 100 <- Minus
3R 18674626..18676235 679..2288 100 <- Minus
3R 18676890..18677296 70..476 100 <- Minus
3R 18677365..18677412 22..69 100 <- Minus
3R 18677479..18677499 1..21 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:39:55 Download gff for LP22035.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14500348..14501957 679..2288 100 <- Minus
arm_3R 14502352..14502553 477..678 100 <- Minus
arm_3R 14502612..14503018 70..476 100 <- Minus
arm_3R 14503087..14503134 22..69 100 <- Minus
arm_3R 14503201..14503221 1..21 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:54:42 Download gff for LP22035.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18418196..18418243 22..69 100 <- Minus
3R 18418310..18418330 1..21 100   Minus
3R 18415457..18417066 679..2288 100 <- Minus
3R 18417461..18417662 477..678 100 <- Minus
3R 18417721..18418127 70..476 100 <- Minus

LP22035.hyp Sequence

Translation from 6 to 1784

> LP22035.hyp
MQELKQRFERRQLADDLKQKQVIQDHLLQKILYSKRLLVDHVEALEHCMQ
ELQTASSASSGRQLLTTRNACLILGGTLLEHLITPRGIRYTMVPSILISG
TFAALFAVKSVFVCRNKIVERKLEQLVKTIDEFGNCIRRNMTYFQEIIIM
KQAELIESRQIERAWDCITAAKEVTEILYDATRKLETDYPLPTKYSAYYA
PMEELRECEYFKNNVTDYSPKHIKDFHNIFAYVQSQYLLRLALTITTRPS
ISQLSEDLVKIDSLVRQLVQEEEQHFSNLALALQNKKQLELAELNATRAE
QQQSGPIAVLQHSSLKLSACMVAVAAECQALDVTLQKLTVTEAAKKNNSK
ELVAVANNMHGIENALAVCCDDFQRLMLVYNKFLHSQLDLEGELPKPKQD
LDDEFPESILRVEFSQNVDAPQQRDDFYAYMYDENEEQHFEAEQNAPFPS
PEKELLNFEKRITKGRFKPVLKQLKDRIDPIRQVMLEKEREVLASKGINV
DELFGKMERVEQQQEDNRLADAAPLPVYESSSNSDSDSADEEAFRRRSKQ
HKERDNFAEMRQFLAQKQAINLFKLPPPPVAAGGEELLESEC*

LP22035.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:05:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG7705-PA 592 CG7705-PA 1..592 1..592 3004 100 Plus
CG7705-PB 157 CG7705-PB 1..157 1..157 782 100 Plus

LP22035.pep Sequence

Translation from 6 to 1784

> LP22035.pep
MQELKQRFERRQLADDLKQKQVIQDHLLQKILYSKRLLVDHVEALEHCMQ
ELQTASSASSGRQLLTTRNACLILGGTLLEHLITPRGIRYTMVPSILISG
TFAALFAVKSVFVCRNKIVERKLEQLVKTIDEFGNCIRRNMTYFQEIIIM
KQAELIESRQIERAWDCITAAKEVTEILYDATRKLETDYPLPTKYSAYYA
PMEELRECEYFKNNVTDYSPKHIKDFHNIFAYVQSQYLLRLALTITTRPS
ISQLSEDLVKIDSLVRQLVQEEEQHFSNLALALQNKKQLELAELNATRAE
QQQSGPIAVLQHSSLKLSACMVAVAAECQALDVTLQKLTVTEAAKKNNSK
ELVAVANNMHGIENALAVCCDDFQRLMLVYNKFLHSQLDLEGELPKPKQD
LDDEFPESILRVEFSQNVDAPQQRDDFYAYMYDENEEQHFEAEQNAPFPS
PEKELLNFEKRITKGRFKPVLKQLKDRIDPIRQVMLEKEREVLASKGINV
DELFGKMERVEQQQEDNRLADAAPLPVYESSSNSDSDSADEEAFRRRSKQ
HKERDNFAEMRQFLAQKQAINLFKLPPPPVAAGGEELLESEC*

LP22035.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 22:00:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18100-PA 593 GF18100-PA 1..581 1..580 2645 86.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 22:00:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16359-PA 591 GG16359-PA 1..591 1..592 3041 96.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 22:00:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19211-PA 612 GH19211-PA 1..612 1..592 2388 78 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:20:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG7705-PA 592 CG7705-PA 1..592 1..592 3004 100 Plus
CG7705-PB 157 CG7705-PB 1..157 1..157 782 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 22:00:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24245-PA 608 GI24245-PA 1..608 1..592 2288 74.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 22:00:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23168-PA 599 GL23168-PA 1..599 1..592 2590 82.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 22:00:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20530-PA 599 GA20530-PA 1..599 1..592 2593 82.7 Plus
Dpse\GA20530-PD 157 GA20530-PD 1..157 1..157 722 84.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 22:00:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18690-PA 592 GM18690-PA 1..592 1..592 3070 97.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 22:00:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20156-PA 592 GD20156-PA 1..592 1..592 3085 97.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 22:00:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10818-PA 603 GJ10818-PA 1..603 1..592 2230 73.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 22:00:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10868-PA 594 GK10868-PA 1..583 1..580 2313 77.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 22:00:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25183-PA 591 GE25183-PA 1..579 1..580 2874 94.8 Plus
Dyak\GE11087-PA 107 GE11087-PA 1..95 485..580 372 87.5 Plus