Clone LP22592 Report

Search the DGRC for LP22592

Clone and Library Details

Library:LP
Tissue Source:Drosophila melanogaster larval-early pupal
Created by:Ling Hong
Date Registered:1998-06-11
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:225
Well:92
Vector:pOT2
Associated Gene/TranscriptCG15756-RA
Protein status:LP22592.pep: gold
Sequenced Size:1323

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15756 2003-01-01 Sim4 clustering to Release 3
CG15756 2008-04-29 Picked prior to 5.5
CG15756 2008-04-29 Stopped prior to 5.5

Clone Sequence Records

LP22592.complete Sequence

1323 bp assembled on 2010-04-28

GenBank Submission: BT124860.1

> LP22592.complete
CAACATGTTCCAACATTTCAAGCAGATCTATGCTGGGCTGGGTGTCAGTT
CTCTGATGGTCACCCTGGCCATCCTACTGCTCCTTCAGCCCGTGGATGCA
CGCTGGACTCGCAGACCCAGGCGTACCACCACGCCAAGGAGCACCACAAG
CATAACCACCGCGAATCCGGATCGTCATCAGCATGTGCACCACTGGCCAC
CATTGGTGGCACCACCGCCACAGCCTCAACCACAGCCACCAGTGGTTGTG
GTGCAGAAGCCAAGTCACACGGAGACCAGTCCCCGTCTCGTCGATAGCTT
CGATCAGAGATCACTGGACGGGCAGTACGAGTTCAGATATCAGCTGGATA
ATGGCAACACGCGATATGAGCGCGCCTACTGGCTGCCCGTGGGCAAGGAT
CTCGTTCTGGCCAAGAAGGGATACTATTCGGTGCCACTGCCAAACGACAA
GTACTCCACGGTGTTCTACACCGCCGATCATCGTGGCTACCATGTGGACA
TGCAGACATTATCCGTAGAGCAGCCGCTATTGCCGCGCAGCCTGGAAGTG
CCCGGAGTGGAAAGGGATGTGGGATCGGGAATGGGAATGGGCACCGGAAT
AGCCACGGGTACGGGGACTAAGCGAAATTCAATAAGCGACCCGGAGCGTA
ACGAGCTGCCTGTGGAAGTGGAAGTGAATGAGGCTGAGGATGTGGATGTG
GATGTGGACGCAAGTGATGCTGGCACCGAGCTGGTTCCTAATGCTGTAAA
CCAAGTCGAAACCGAAACCGAACCATCAACTTTGGCCAACGACATTTTGG
CAACTGGAGCACCAGCCGACAGCCATGATGATGATCACGATGACGATGGC
GATGAGGATGGGGATGACGATGTTGATGATGATGAAGGCGCCTCAAACTG
AAAGCCCGAACATTAGAGGACATTTCGGCATACAGAGAATGGAGATTGAG
ACTGGCAGGGGAACTGGCACACACTTGGCTGCCTCGCAGCTCGCTCTACT
TGCTGCAAATCAAATTGAAAACAATTGTTGCAGTCACCAGTCCGACACAG
TTGAGTTGGCCAGTAGTCCCCATATACCATGCAGCAGGATGAGCAGGAGC
TGGAGGAGAAGTCAAGTCGACTCCACTTAACTCCATCGTCATCTTCATCT
TGGAATTCTAAGGGGAATGTGTCTCAATTGCTCGCTTGACAGCTCCTTTT
AGGTCGCTTTCTATGTTTTCTGTTTGCCTCACTCTGTGTGTGAGATGGTA
TTCTTTTTTTTTTCAATATTTAATAAAAATAAATAATAAATGTAGGATAT
AAAAAAAAAAAAAAAAAAAAAAA

LP22592.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:16:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG15756.a 1366 CG15756.a 70..1366 1..1297 6485 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 12:04:59
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 13426422..13426985 743..1300 2585 98 Plus
chrX 22417052 chrX 13425246..13425581 1..336 1680 100 Plus
chrX 22417052 chrX 13425875..13426114 504..743 1185 99.6 Plus
chrX 22417052 chrX 13425640..13425809 334..503 850 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 12:04:57
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13535645..13536205 743..1303 2805 100 Plus
X 23542271 X 13534469..13534804 1..336 1680 100 Plus
X 23542271 X 13535098..13535337 504..743 1200 100 Plus
X 23542271 X 13534863..13535032 334..503 850 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:34:20
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 13543743..13544303 743..1303 2805 100 Plus
X 23527363 X 13542567..13542902 1..336 1680 100 Plus
X 23527363 X 13543196..13543435 504..743 1200 100 Plus
X 23527363 X 13542961..13543130 334..503 850 100 Plus
Blast to na_te.dros performed 2019-03-16 12:04:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 1967..2036 179..246 120 65.7 Plus

LP22592.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 12:06:14 Download gff for LP22592.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 13425246..13425581 1..336 100 -> Plus
chrX 13425643..13425809 337..503 100 -> Plus
chrX 13425875..13426113 504..742 99 -> Plus
chrX 13426422..13426503 743..824 100 == Plus
chrX 13426565..13426935 886..1252 98 <- Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-04-28 12:35:30 Download gff for LP22592.complete
Subject Subject Range Query Range Percent Splice Strand
CG15756-RA 1..897 5..901 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:24:52 Download gff for LP22592.complete
Subject Subject Range Query Range Percent Splice Strand
CG15756-RA 1..897 5..901 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 14:23:49 Download gff for LP22592.complete
Subject Subject Range Query Range Percent Splice Strand
CG15756-RA 1..897 5..901 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:35:35 Download gff for LP22592.complete
Subject Subject Range Query Range Percent Splice Strand
CG15756-RA 1..897 5..901 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-28 12:35:30 Download gff for LP22592.complete
Subject Subject Range Query Range Percent Splice Strand
CG15756-RA 1..897 5..901 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:24:51 Download gff for LP22592.complete
Subject Subject Range Query Range Percent Splice Strand
CG15756-RA 1..897 5..901 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:23:49 Download gff for LP22592.complete
Subject Subject Range Query Range Percent Splice Strand
CG15756-RA 70..1369 1..1300 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:35:35 Download gff for LP22592.complete
Subject Subject Range Query Range Percent Splice Strand
CG15756-RA 70..1369 1..1300 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:06:14 Download gff for LP22592.complete
Subject Subject Range Query Range Percent Splice Strand
X 13535098..13535336 504..742 100 -> Plus
X 13534469..13534804 1..336 100 -> Plus
X 13534866..13535032 337..503 100 -> Plus
X 13535645..13536202 743..1300 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:06:14 Download gff for LP22592.complete
Subject Subject Range Query Range Percent Splice Strand
X 13535098..13535336 504..742 100 -> Plus
X 13534469..13534804 1..336 100 -> Plus
X 13534866..13535032 337..503 100 -> Plus
X 13535645..13536202 743..1300 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:06:14 Download gff for LP22592.complete
Subject Subject Range Query Range Percent Splice Strand
X 13535098..13535336 504..742 100 -> Plus
X 13534469..13534804 1..336 100 -> Plus
X 13534866..13535032 337..503 100 -> Plus
X 13535645..13536202 743..1300 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:23:49 Download gff for LP22592.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 13429678..13430235 743..1300 100   Plus
arm_X 13428502..13428837 1..336 100 -> Plus
arm_X 13428899..13429065 337..503 100 -> Plus
arm_X 13429131..13429369 504..742 100 -> Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:56:57 Download gff for LP22592.complete
Subject Subject Range Query Range Percent Splice Strand
X 13542964..13543130 337..503 100 -> Plus
X 13542567..13542902 1..336 100 -> Plus
X 13543196..13543434 504..742 100 -> Plus
X 13543743..13544300 743..1300 100   Plus

LP22592.hyp Sequence

Translation from 1 to 900

> LP22592.hyp
NMFQHFKQIYAGLGVSSLMVTLAILLLLQPVDARWTRRPRRTTTPRSTTS
ITTANPDRHQHVHHWPPLVAPPPQPQPQPPVVVVQKPSHTETSPRLVDSF
DQRSLDGQYEFRYQLDNGNTRYERAYWLPVGKDLVLAKKGYYSVPLPNDK
YSTVFYTADHRGYHVDMQTLSVEQPLLPRSLEVPGVERDVGSGMGMGTGI
ATGTGTKRNSISDPERNELPVEVEVNEAEDVDVDVDASDAGTELVPNAVN
QVETETEPSTLANDILATGAPADSHDDDHDDDGDEDGDDDVDDDEGASN*

LP22592.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 05:51:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG15756-PA 298 CG15756-PA 1..298 2..299 1584 100 Plus
Cpr12A-PA 173 CG15757-PA 18..123 81..186 223 41.5 Plus

LP22592.pep Sequence

Translation from 1 to 900

> LP22592.pep
NMFQHFKQIYAGLGVSSLMVTLAILLLLQPVDARWTRRPRRTTTPRSTTS
ITTANPDRHQHVHHWPPLVAPPPQPQPQPPVVVVQKPSHTETSPRLVDSF
DQRSLDGQYEFRYQLDNGNTRYERAYWLPVGKDLVLAKKGYYSVPLPNDK
YSTVFYTADHRGYHVDMQTLSVEQPLLPRSLEVPGVERDVGSGMGMGTGI
ATGTGTKRNSISDPERNELPVEVEVNEAEDVDVDVDASDAGTELVPNAVN
QVETETEPSTLANDILATGAPADSHDDDHDDDGDEDGDDDVDDDEGASN*

LP22592.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:44:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22572-PA 277 GF22572-PA 30..252 30..268 597 62 Plus
Dana\GF22573-PA 170 GF22573-PA 36..127 93..184 205 45.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:44:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17787-PA 298 GG17787-PA 1..268 2..275 1009 88.3 Plus
Dere\GG17788-PA 173 GG17788-PA 18..123 81..186 222 42.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:44:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12497-PA 280 GH12497-PA 2..217 13..242 537 55.6 Plus
Dgri\GH12498-PA 166 GH12498-PA 19..120 83..184 205 41.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:53:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG15756-PA 298 CG15756-PA 1..298 2..299 1584 100 Plus
Cpr12A-PA 173 CG15757-PA 18..123 81..186 223 41.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:44:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14848-PA 287 GI14848-PA 27..192 32..222 492 54.6 Plus
Dmoj\GI14849-PA 191 GI14849-PA 40..132 95..187 214 45.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:44:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20235-PA 294 GL20235-PA 59..269 56..268 607 60.1 Plus
Dper\GL20236-PA 190 GL20236-PA 47..136 95..184 209 46.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:44:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13936-PA 294 GA13936-PA 59..265 56..268 612 62.4 Plus
Dpse\GA13937-PA 190 GA13937-PA 47..136 95..184 208 46.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:44:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17612-PA 300 GM17612-PA 1..271 2..272 1011 96.7 Plus
Dsec\GM17614-PA 173 GM17614-PA 18..123 81..186 221 41.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:44:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17131-PA 213 GD17131-PA 1..166 2..167 874 98.2 Plus
Dsim\GD17132-PA 173 GD17132-PA 18..123 81..186 221 41.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:44:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19507-PA 302 GJ19507-PA 19..242 28..257 546 54 Plus
Dvir\GJ19510-PA 184 GJ19510-PA 41..133 95..187 218 46.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:44:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20083-PA 279 GK20083-PA 62..230 58..223 360 49.4 Plus
Dwil\GK20084-PA 183 GK20084-PA 34..127 91..184 189 42.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:44:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17082-PA 306 GE17082-PA 1..277 2..272 812 80.1 Plus
Dyak\GE17084-PA 170 GE17084-PA 22..123 85..186 217 43.1 Plus