LP22624.complete Sequence
812 bp assembled on 2009-10-29
GenBank Submission: BT100180.1
> LP22624.complete
AGAGCTTTGCATCGCAGAAACAGAAGAAGAAGAAGGCATTGAAGTCCATA
TCCTATACCGAAGCTATCATGTTGAAGGCGGTGAGTGTGTGGTTCCAAGG
GGCGGACCTAATCTAATCGCCGGTTCAGATATGAAAGTGGCTTCAATTTA
ATTTACTATCAATACCCATCGATTCACCTTGATTACTCCGGATGTTTGGC
CCGCTGCAGATTATCGTTTTTGCCACTATCTTGGTGGCCGTGGCCATGGC
CATGCAGCCACTGGAGGACAATGAGCGAACCCATCATCTGAACCACAAGC
GCCAGTTGTCGCAACAGCACCACCACCACCACCAAAAGCTCCAGGAGGTG
AGGCATTCGGGCCATGATAGTCTGAAACATGGTGGTTCCCACGTTAAGGA
GCATCAAGCGCATCACTCTGAGCGAAAGGCCAGGCAGAGCCACAAGGAGC
CGGGCCACAAGAAGAGTCACCACCAGAAGGAGCACCGCCAGCAGCAGGAC
AACCACACCCGCAAATCCCGATCGCATTCCAAGGGCAGCAAGCAGCATCA
CAAGCGGCACACGGGATCGCGTCGCCACTAGGATAATCCTGTATCCTGTG
GCCAGGATATATTCTATTTAAACTCTAGCCAATGGATTCCTTATGCGAGG
ATTAAACTCCGAATACAGTAAACACTCGTATAATTGCATGTATGGCAACA
GTAAAGCCAATCTATTTAAATGTTTACAAAACTACTGTGAAATATAAGCC
ATGACCAAATAAACACACATTTCATAAATGATATTAATATCCACAAAAAA
AAAAAAAAAAAA
LP22624.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:40:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34232-RB | 636 | CG34232-RB | 1..636 | 1..636 | 3180 | 100 | Plus |
CG34232.a | 1027 | CG34232.a | 396..983 | 209..796 | 2940 | 100 | Plus |
CG34232-RA | 813 | CG34232-RA | 182..769 | 209..796 | 2940 | 100 | Plus |
CG34232.a | 1027 | CG34232.a | 317..396 | 1..80 | 400 | 100 | Plus |
CG34232-RA | 813 | CG34232-RA | 103..182 | 1..80 | 400 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:01:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 8052124..8052917 | 794..1 | 3895 | 99.4 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:59:20 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:01:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12164907..12165702 | 796..1 | 3980 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:37:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 12166106..12166901 | 796..1 | 3980 | 100 | Minus |
Blast to na_te.dros performed 2019-03-16 18:01:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
rooA | 7621 | rooA ROOA_LTR 7621bp | 5006..5072 | 647..717 | 128 | 70.4 | Plus |
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 696..737 | 476..517 | 111 | 73.8 | Plus |
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 8578..8619 | 476..517 | 111 | 73.8 | Plus |
LP22624.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:02:40 Download gff for
LP22624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 8052124..8052917 | 1..794 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-29 11:34:32 Download gff for
LP22624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34232-RB | 1..390 | 192..581 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:14:36 Download gff for
LP22624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34232-RB | 1..390 | 192..581 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:43:27 Download gff for
LP22624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34232-RB | 1..390 | 192..581 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:26:55 Download gff for
LP22624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34232-RB | 1..390 | 192..581 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-29 11:34:32 Download gff for
LP22624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34232-RB | 1..636 | 1..636 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:14:35 Download gff for
LP22624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34232-RB | 1..636 | 1..636 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:43:27 Download gff for
LP22624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34232-RB | 18..811 | 1..794 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:26:55 Download gff for
LP22624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34232-RB | 38..831 | 1..794 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:02:40 Download gff for
LP22624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12164909..12165702 | 1..794 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:02:40 Download gff for
LP22624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12164909..12165702 | 1..794 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:02:40 Download gff for
LP22624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12164909..12165702 | 1..794 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:43:27 Download gff for
LP22624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8052414..8053207 | 1..794 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:04:54 Download gff for
LP22624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12166108..12166901 | 1..794 | 100 | | Minus |
LP22624.pep Sequence
Translation from 191 to 580
> LP22624.pep
MFGPLQIIVFATILVAVAMAMQPLEDNERTHHLNHKRQLSQQHHHHHQKL
QEVRHSGHDSLKHGGSHVKEHQAHHSERKARQSHKEPGHKKSHHQKEHRQ
QQDNHTRKSRSHSKGSKQHHKRHTGSRRH*
LP22624.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 19:46:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF12640-PA | 126 | GF12640-PA | 5..102 | 7..81 | 152 | 48 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:46:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG22603-PA | 122 | GG22603-PA | 5..122 | 7..129 | 387 | 70.1 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:01:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34232-PB | 129 | CG34232-PB | 1..129 | 1..129 | 711 | 100 | Plus |
CG34232-PC | 127 | CG34232-PC | 5..127 | 7..129 | 678 | 100 | Plus |
CG34232-PA | 127 | CG34232-PA | 5..127 | 7..129 | 678 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:46:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM20382-PA | 127 | GM20382-PA | 5..127 | 7..129 | 471 | 91.9 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:46:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD25856-PA | 127 | GD25856-PA | 5..127 | 7..129 | 522 | 93.5 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:46:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE13471-PA | 133 | GE13471-PA | 5..133 | 7..129 | 469 | 78.9 | Plus |
LP22624.hyp Sequence
Translation from 191 to 580
> LP22624.hyp
MFGPLQIIVFATILVAVAMAMQPLEDNERTHHLNHKRQLSQQHHHHHQKL
QEVRHSGHDSLKHGGSHVKEHQAHHSERKARQSHKEPGHKKSHHQKEHRQ
QQDNHTRKSRSHSKGSKQHHKRHTGSRRH*
LP22624.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:43:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34232-PB | 129 | CG34232-PB | 1..129 | 1..129 | 711 | 100 | Plus |
CG34232-PC | 127 | CG34232-PC | 5..127 | 7..129 | 678 | 100 | Plus |
CG34232-PA | 127 | CG34232-PA | 5..127 | 7..129 | 678 | 100 | Plus |