BDGP Sequence Production Resources |
Search the DGRC for LP23408
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 234 |
Well: | 8 |
Vector: | pOT2 |
Associated Gene/Transcript | CG14062-RB |
Protein status: | LP23408.pep: gold |
Sequenced Size: | 1200 |
Gene | Date | Evidence |
---|---|---|
CG14062 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14062 | 2004-03-05 | Blastp of sequenced clone |
CG14062 | 2008-04-29 | Release 5.5 accounting |
CG14062 | 2008-08-15 | Release 5.9 accounting |
CG14062 | 2008-12-18 | 5.12 accounting |
1200 bp (1200 high quality bases) assembled on 2004-03-05
GenBank Submission: BT012301
> LP23408.complete GATATGTTGCGAATTCTACTTCTGCTACTGGCATTCTGTGCCTTGGCACA TGGACAGTGCCGATTCACCAGAGCTCAAGTGCAAGGGACCAATCGGATCT TTATGGTGCGTGGTCAGAACCGCCAGCTGTCCCTTAAGCGAACAGCCAGT TCGGCGGTTGGCGAAACCCTGCAGATGTGGTGCAATCCCCGGGACATAGT GGCCACCACCTGCCAGGCGGGAAGGGTTCCAGCCTTCCAGCCACCCTTGC CCATGACCTGCCGCGCTGCTCCGGCGGCCATCACCACACCGGTCCAAGAT CGCAGATGTCCGGCCACCATGTACCGGGTGGGCTACAACGTGGGCAACAA CCAGTTCCTGGAGCTCTATCGCGCCTGCTTCGATACCAGAGCTGTGAGGG CTATCTTCGTGGAACACCGGGTGTATGGAAAGCCCTTCTATATCACCCGA CCCTGTGTCCAATTTAGTTCGGATGGAGTGATCAGTGGCGCGGATGAAGC TAGCTATACGGTCCGAAATATCCACGGCACCTTTAGGAGGCTGTTTGGCA ACAATCAGAACTATATACCGAACAACCGCGATGTGATCATCAATCGCGGA CATCTGGCCGCCTCGGCCGACTTCTTCTTTGGTGACCAATTGTGCGCCAC CTTCAAGTATGTGAATGCAGTGCCGCAGTTCAAGAGCATCAACGATGGCA ACTGGGAGACCATCGAGCGATTCGTTCGTAATTCGGTGACCGGAAACAAC TTTGTGAATGTGCGCACCGGGGCCAGGGGCGTACTCTCGCTGCCATCGGG CAATAGACCCAAGAATGTCTTCCTAAGTGGCAACAGGAACCCGGTGCCCC AGTGGATGTACAAGATAGTGCGGAACGCCAACAACCAGCCCATCGTGGCC TTCCTCACCCTGAACAACATCTACGCACGTCAACGTCCAGCTGCTCCCAA CTTTTGTCAGCCCGTGAATTGCCCAGTGGCATTGGTCAACACGGCACAGG CTGGCTTTTCGTTCTGTTGCAACCCCGCCACTTTCAGGCCCTAATTGGAT GCCTTTCTCAATAAGAAAAACCTGTCAGCCTTACAAAAATGTGAGGTTTT TAATATAACAAAATTCAAACATGGTAATAATTTAAACAATAATTTAAACT GAAATTAAAAGTATATTATTTTGGCTTTAGAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14062-RB | 1276 | CG14062-RB | 24..1204 | 1..1181 | 5905 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 24464658..24465398 | 1180..440 | 3705 | 100 | Minus |
chr3R | 27901430 | chr3R | 24465469..24465862 | 439..46 | 1970 | 100 | Minus |
chr3R | 27901430 | chr3R | 24465919..24465964 | 46..1 | 230 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 28641584..28642325 | 1181..440 | 3710 | 100 | Minus |
3R | 32079331 | 3R | 28642396..28642789 | 439..46 | 1970 | 100 | Minus |
3R | 32079331 | 3R | 28642846..28642891 | 46..1 | 230 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 28382415..28383156 | 1181..440 | 3710 | 100 | Minus |
3R | 31820162 | 3R | 28383227..28383620 | 439..46 | 1970 | 100 | Minus |
3R | 31820162 | 3R | 28383677..28383722 | 46..1 | 230 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 24464658..24465398 | 440..1180 | 100 | <- | Minus |
chr3R | 24465469..24465861 | 47..439 | 100 | <- | Minus |
chr3R | 24465919..24465964 | 1..46 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14062-RB | 1..1041 | 4..1044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14062-RB | 1..1041 | 4..1044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14062-RB | 1..1041 | 4..1044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14062-RB | 1..1041 | 4..1044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14062-RB | 1..1041 | 4..1044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14062-RB | 1..1180 | 1..1180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14062-RB | 1..1180 | 1..1180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14062-RB | 1..1180 | 1..1180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14062-RB | 1..1180 | 1..1180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14062-RB | 1..1180 | 1..1180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 28641585..28642325 | 440..1180 | 100 | <- | Minus |
3R | 28642396..28642788 | 47..439 | 100 | <- | Minus |
3R | 28642846..28642891 | 1..46 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 28641585..28642325 | 440..1180 | 100 | <- | Minus |
3R | 28642396..28642788 | 47..439 | 100 | <- | Minus |
3R | 28642846..28642891 | 1..46 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 28641585..28642325 | 440..1180 | 100 | <- | Minus |
3R | 28642396..28642788 | 47..439 | 100 | <- | Minus |
3R | 28642846..28642891 | 1..46 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 24467307..24468047 | 440..1180 | 100 | <- | Minus |
arm_3R | 24468118..24468510 | 47..439 | 100 | <- | Minus |
arm_3R | 24468568..24468613 | 1..46 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 28382416..28383156 | 440..1180 | 100 | <- | Minus |
3R | 28383227..28383619 | 47..439 | 100 | <- | Minus |
3R | 28383677..28383722 | 1..46 | 100 | Minus |
Translation from 0 to 1043
> LP23408.hyp DMLRILLLLLAFCALAHGQCRFTRAQVQGTNRIFMVRGQNRQLSLKRTAS SAVGETLQMWCNPRDIVATTCQAGRVPAFQPPLPMTCRAAPAAITTPVQD RRCPATMYRVGYNVGNNQFLELYRACFDTRAVRAIFVEHRVYGKPFYITR PCVQFSSDGVISGADEASYTVRNIHGTFRRLFGNNQNYIPNNRDVIINRG HLAASADFFFGDQLCATFKYVNAVPQFKSINDGNWETIERFVRNSVTGNN FVNVRTGARGVLSLPSGNRPKNVFLSGNRNPVPQWMYKIVRNANNQPIVA FLTLNNIYARQRPAAPNFCQPVNCPVALVNTAQAGFSFCCNPATFRP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14062-PB | 346 | CG14062-PB | 1..346 | 2..347 | 1850 | 100 | Plus |
CG12917-PB | 356 | CG12917-PB | 11..354 | 3..345 | 692 | 38.6 | Plus |
CG33346-PB | 364 | CG33346-PB | 26..345 | 20..345 | 534 | 36.8 | Plus |
CG9989-PA | 370 | CG9989-PA | 10..358 | 6..345 | 304 | 28 | Plus |
CG6839-PA | 430 | CG6839-PA | 94..412 | 54..345 | 253 | 24.8 | Plus |
Translation from 3 to 1043
> LP23408.pep MLRILLLLLAFCALAHGQCRFTRAQVQGTNRIFMVRGQNRQLSLKRTASS AVGETLQMWCNPRDIVATTCQAGRVPAFQPPLPMTCRAAPAAITTPVQDR RCPATMYRVGYNVGNNQFLELYRACFDTRAVRAIFVEHRVYGKPFYITRP CVQFSSDGVISGADEASYTVRNIHGTFRRLFGNNQNYIPNNRDVIINRGH LAASADFFFGDQLCATFKYVNAVPQFKSINDGNWETIERFVRNSVTGNNF VNVRTGARGVLSLPSGNRPKNVFLSGNRNPVPQWMYKIVRNANNQPIVAF LTLNNIYARQRPAAPNFCQPVNCPVALVNTAQAGFSFCCNPATFRP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16434-PA | 351 | GF16434-PA | 1..351 | 1..346 | 1045 | 59.1 | Plus |
Dana\GF12781-PA | 348 | GF12781-PA | 4..346 | 2..344 | 754 | 43.4 | Plus |
Dana\GF16433-PA | 242 | GF16433-PA | 1..240 | 106..344 | 733 | 55.6 | Plus |
Dana\GF19869-PA | 250 | GF19869-PA | 1..238 | 106..344 | 281 | 33.5 | Plus |
Dana\GF23654-PA | 429 | GF23654-PA | 93..411 | 53..344 | 248 | 24.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12061-PA | 346 | GG12061-PA | 1..346 | 1..346 | 1715 | 93.9 | Plus |
Dere\GG12062-PA | 351 | GG12062-PA | 6..349 | 1..344 | 860 | 50 | Plus |
Dere\GG24146-PA | 351 | GG24146-PA | 22..349 | 15..344 | 740 | 41.4 | Plus |
Dere\GG11606-PA | 270 | GG11606-PA | 6..264 | 2..263 | 378 | 36.3 | Plus |
Dere\GG11608-PA | 370 | GG11608-PA | 7..358 | 2..344 | 329 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18692-PA | 332 | GH18692-PA | 2..330 | 21..344 | 775 | 47.6 | Plus |
Dgri\GH18691-PA | 332 | GH18691-PA | 2..330 | 21..344 | 759 | 46.7 | Plus |
Dgri\GH23404-PA | 332 | GH23404-PA | 2..330 | 21..344 | 727 | 45.8 | Plus |
Dgri\GH20125-PA | 335 | GH20125-PA | 8..333 | 17..344 | 721 | 41.9 | Plus |
Dgri\GH23403-PA | 342 | GH23403-PA | 12..340 | 8..344 | 694 | 43.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14062-PB | 346 | CG14062-PB | 1..346 | 1..346 | 1850 | 100 | Plus |
CG12917-PB | 356 | CG12917-PB | 11..354 | 2..344 | 692 | 38.6 | Plus |
CG33346-PB | 364 | CG33346-PB | 26..345 | 19..344 | 534 | 36.8 | Plus |
Sid-PA | 370 | CG9989-PA | 10..358 | 5..344 | 304 | 28 | Plus |
CG6839-PA | 430 | CG6839-PA | 94..412 | 53..344 | 253 | 24.8 | Plus |
CG3819-PB | 423 | CG3819-PB | 150..407 | 105..345 | 235 | 26.7 | Plus |
CG3819-PA | 423 | CG3819-PA | 150..407 | 105..345 | 235 | 26.7 | Plus |
CG14120-PA | 1371 | CG14120-PA | 1093..1351 | 106..344 | 223 | 28.4 | Plus |
CG14120-PA | 1371 | CG14120-PA | 151..406 | 106..344 | 213 | 26 | Plus |
CG14118-PA | 439 | CG14118-PA | 161..388 | 99..321 | 180 | 26.1 | Plus |
CG14120-PA | 1371 | CG14120-PA | 790..957 | 187..344 | 173 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19315-PA | 347 | GI19315-PA | 7..345 | 4..344 | 723 | 41.4 | Plus |
Dmoj\GI22179-PA | 301 | GI22179-PA | 1..289 | 58..344 | 533 | 40.1 | Plus |
Dmoj\GI13492-PA | 429 | GI13492-PA | 93..411 | 53..344 | 279 | 26.6 | Plus |
Dmoj\GI13645-PA | 417 | GI13645-PA | 86..372 | 53..324 | 231 | 26.6 | Plus |
Dmoj\GI13641-PA | 1340 | GI13641-PA | 1038..1318 | 86..344 | 223 | 27.3 | Plus |
Dmoj\GI13641-PA | 1340 | GI13641-PA | 80..402 | 53..344 | 215 | 25.7 | Plus |
Dmoj\GI13641-PA | 1340 | GI13641-PA | 755..922 | 187..344 | 205 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13695-PA | 329 | GL13695-PA | 16..329 | 16..346 | 1092 | 65.3 | Plus |
Dper\GL13696-PA | 356 | GL13696-PA | 6..354 | 1..344 | 956 | 52.8 | Plus |
Dper\GL13697-PA | 351 | GL13697-PA | 6..332 | 15..340 | 895 | 52.4 | Plus |
Dper\GL11579-PA | 371 | GL11579-PA | 34..369 | 10..344 | 716 | 41.9 | Plus |
Dper\GL23183-PA | 258 | GL23183-PA | 1..246 | 106..344 | 399 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12733-PA | 346 | GA12733-PA | 16..346 | 16..346 | 1340 | 74.9 | Plus |
Dpse\GA26995-PA | 356 | GA26995-PA | 6..354 | 1..344 | 968 | 53.4 | Plus |
Dpse\GA26996-PB | 369 | GA26996-PB | 10..350 | 1..340 | 935 | 52.3 | Plus |
Dpse\GA11906-PA | 320 | GA11906-PA | 2..318 | 26..344 | 700 | 42.8 | Plus |
Dpse\GA27180-PA | 258 | GA27180-PA | 1..246 | 106..344 | 407 | 38.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12290-PA | 346 | GM12290-PA | 1..346 | 1..346 | 1784 | 97.4 | Plus |
Dsec\GM12291-PA | 351 | GM12291-PA | 6..349 | 1..344 | 917 | 51.2 | Plus |
Dsec\GM21190-PA | 320 | GM21190-PA | 2..318 | 26..344 | 683 | 40.6 | Plus |
Dsec\GM12731-PA | 357 | GM12731-PA | 6..345 | 2..344 | 543 | 37 | Plus |
Dsec\GM12732-PA | 370 | GM12732-PA | 16..358 | 11..344 | 269 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18024-PA | 346 | GD18024-PA | 1..346 | 1..346 | 1795 | 98 | Plus |
Dsim\GD18025-PA | 351 | GD18025-PA | 6..349 | 1..344 | 912 | 50.6 | Plus |
Dsim\GD10718-PA | 325 | GD10718-PA | 2..323 | 26..344 | 698 | 40.9 | Plus |
Dsim\GD21377-PA | 275 | GD21377-PA | 6..269 | 2..268 | 402 | 37 | Plus |
Dsim\GD21378-PA | 370 | GD21378-PA | 16..358 | 11..344 | 277 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22194-PA | 320 | GJ22194-PA | 2..318 | 26..344 | 720 | 43.8 | Plus |
Dvir\GJ24298-PA | 514 | GJ24298-PA | 168..502 | 11..344 | 645 | 41.8 | Plus |
Dvir\GJ11853-PA | 428 | GJ11853-PA | 92..410 | 53..344 | 276 | 26.3 | Plus |
Dvir\GJ13524-PA | 429 | GJ13524-PA | 156..413 | 105..345 | 254 | 26.7 | Plus |
Dvir\GJ13976-PA | 1389 | GJ13976-PA | 125..403 | 84..344 | 231 | 25.9 | Plus |
Dvir\GJ13976-PA | 1389 | GJ13976-PA | 1108..1367 | 106..344 | 215 | 26.1 | Plus |
Dvir\GJ13976-PA | 1389 | GJ13976-PA | 801..968 | 187..344 | 213 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10989-PA | 349 | GK10989-PA | 1..349 | 1..346 | 1226 | 67.6 | Plus |
Dwil\GK10991-PA | 350 | GK10991-PA | 20..348 | 15..344 | 941 | 56 | Plus |
Dwil\GK18004-PA | 321 | GK18004-PA | 2..319 | 26..344 | 699 | 44.1 | Plus |
Dwil\GK10992-PA | 255 | GK10992-PA | 1..243 | 106..344 | 513 | 41.9 | Plus |
Dwil\GK17844-PA | 268 | GK17844-PA | 1..248 | 106..346 | 443 | 42.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10502-PA | 346 | GE10502-PA | 1..346 | 1..346 | 1704 | 92.2 | Plus |
Dyak\GE10503-PA | 351 | GE10503-PA | 7..349 | 2..344 | 883 | 49.9 | Plus |
Dyak\GE19342-PA | 320 | GE19342-PA | 2..318 | 26..344 | 685 | 40.9 | Plus |
Dyak\GE10504-PA | 251 | GE10504-PA | 1..239 | 106..344 | 376 | 37.4 | Plus |
Dyak\GE23796-PA | 373 | GE23796-PA | 11..361 | 6..344 | 312 | 29.9 | Plus |