BDGP Sequence Production Resources |
Search the DGRC for LP23835
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 238 |
Well: | 35 |
Vector: | pOT2 |
Associated Gene/Transcript | Brca2-RA |
Protein status: | LP23835.pep: gold |
Sequenced Size: | 3226 |
Gene | Date | Evidence |
---|---|---|
CG30169 | 2003-01-01 | Sim4 clustering to Release 3 |
CG30169 | 2008-04-29 | Release 5.5 accounting |
CG30169 | 2008-08-15 | Release 5.9 accounting |
CG30169 | 2008-12-18 | 5.12 accounting |
3226 bp (3226 high quality bases) assembled on 2005-08-05
GenBank Submission: BT023811
> LP23835.complete CTTCAATAAAACACATTTAAACAATTAGATGACGTGATGGACCAGAATGG CGCATCGGGAAGTCATCCGAACAGGCTATCCCAAGGAAGAGGAGCCCATG CGCGCGAACGTGGCGCCACAGTTTCCGCGGCGGCAAATCGGAGTAACATT ATCGACGAAATGGCCAAAATATGCGAAGCCGATCGCCAGACTTTCGCCAT CGCTCGACGGACTCGGGGTCACGAGCGGCTTGCGGTGGACAACAGCGACT TCGTCGCCGTGGAGGATCTTATTTTGTCCTACGCAGAGCCCACGCCCGAG GACCAGGTCGAGATGATCATGAGCGACTTTTGCTCGTCTCCAACATACGC AGAGGATGAGGATGAGCCCAGCCATGAGTCGGAGCCGTGGTTTCGATTTC GCAACAAAAGGATCAGAACCTACAGCCGGAAGAGGGATCCCAAAAGCCAC AAGGCCGTTCAAAACGAGAAGCGTAGAGGTTCCTCAGGCCTCTCCGTGCA GAGGGATCTCAATACTTCGTTCACATCTATGGCTTGTGATTTCGATGCTT CATCACAGAAGATACACGAGGTCCTTTTGAACCTCAGTCAATACTTTTCC GCGACCGCGACAGCTTCCGGTCCGACTCCTGTCCCATCGCAAATAGATCT GCCAACCGAAGCAAGGCAGGATTCTGGTGACGAGTGTTTCAACGCTGAAT TGGAGAACTTGAGGGATGACCTGTTGCAGAGCGGATTTACATTTGAGGCC TCTTTCTATGAAAATGAGCATGAGCAGGAAGGTCCAGGAACTATGGCAGA CACTATTTATGGCGATAGCATGCAATCGGTTCCCACTACGCGCCTCCGAT TGGAAAGTGGAAAACGTAATGTTTGGTCTGATGCAGACTCTACATTGAAA AAAGCTGATGTCGAAATTGCTGAAAATAAGAAACTTTTGATGGGCCAAAC GCAAGCAAAAAATGTTGACATAGAGGAGAACACAAACTTCATATTAGAAG GCATACCACTAAGTGAATGGCTAACTCCGATGGAACTGCCCGAGATCTCC AAAGATGTAATCAAACATATACCCGATAAAAAGTTAAAGTTGGAGCCAAG TTCCCAGAAAGAACAAAAAAGTAGCAAAGATTCAAATGCATCAAAGGTTA GAGGAGCCTCAAAACAATCTTGTGATATTAACACGAAAAACGAAGGAACT ACTATTCTGGATCAGCCTAATGCTGCAGAGCAAGAAAACCTATTGAACGA CGGCGAGCTTCTTGAGGAGTTTCTTTTTAATGATTGGCAACCAATGCAGT GCTCTAATGGCCCATCAACCTCCAAAAACGCAATTCAAGGGCCTAAAGAA AACATCAATTCAATAAATCTGGACGACAAGGAGCAACCAGAAAAGCAGAC TCCTAATAAAAGTCAGACCATAAGCAGTCATCAACTTAATGGCATTCGAA AGAAGTCCTTCAAATTTATCGAGGTTTCGGAAGAAATGAAAATTAAAGGC GAAGAGTTTGTAGACAAAGTTGTATCCGGCCTATATCACTTTAGTCACAA GTGCAACTTACGTACTGAGGAATACTCCGATAATCATAGTCAAGTAATGG AATCAACACAGTGTGCGGAATTCAAATCAGCCCCAAGCAAGCCCATCGAA ATATTGGATGGTAAGGAAACCTACAATGCAATAGCTAAAGTTGACGTTGG AGAAATAAATGGAAAATTCAGTCCTCTCAATAACGATACTATAGCAGAGC CCGAGTTTTGTGGCTTTCGCACAGCCTCAAATAAGGCAATTCCGATTTCT GAGAAGATGAAAATCAAAACTGCAGAGTTTATGGCTGAGTTTCAATCCAA AGAAACAATTCAACAAAATGATTATTTAGTCCATCAGCCAAATGACAAAC CGACGTCTGTTGGACTTGATACAGCCTTAAAAAGATCAATAGAGAGTTCA GAGGAAATGCGATCGAAAGCTTCCAAGTTGGTGGTCGTTGATACTACAAT GCGGGAACCGCATCAACCCACACTTGACCCAGTTTGCCGTGACTTAAATG AATCACAGTTTTTCGGCTTTAGAACAGCGTCAAACAAAGCCATTGAGATT ACCGAGGCGATGGAGAAGAGAGGAGCCATGTTTCTGGCCCAGTCTAAAGC TACAGACCAATTAAACGGGTGGCAGCCAAGCGATTTTCCTGATGTTCTAC CCACCTCTCCAAACAATGAGATTCATTCAATAAATGTTGAAAATAATAAG GCTGTGAATACTAAAACCGTATCTGAGACCGAATTCTTCGGCTTTCGTAC CGCTTCAAATAAAGGAATTGTGATTTCGGAAAATACGAAAATCAAAGTTG CACAGTTCATGAGTGAATTTCAAGCCGCCGATGCAAGCACTGACTCGAAC CAACCAACTGTGATCTCTGAGGAATCGAGAAATATTGATGCCAAGTTCGT AGATGAAGCGGCGGCAGAAGACAGTGCCAACAAGCCAACTTTTTGCAATG TACAAAGTCTAAAAAATACCTCAGATATTGAGCATTTCAAACACGACTTC TTCGTGGAGCATTCTGCAAAGGAAGAGCATCCGCTGTGTAGCCAGCCATT GGTGAGGACACCCAGAAGGTCGCAGGAGATCCACTCCTCACTATCGCAAC TTGCCGGCAAATCACCACTGGACCAGGCCACCAAGAAGTCCGTAATAGCT CGCCGGAACCTCCTGTCACTAAAAAGAAAGCGAAAGATCATTTTGTCAAC TGAAACTTCCACTTCCTGCGCCTTACCCACTATGGAGCGATTCGCTCCCA AGCCTTCCTCGACAAGTACTCCGCTGGCCGACAGGGACTTAAATCGCTCC AAGGACTGTACAAAGAATAGACAGGATGCGGAGGACATGTCCCCTATTTG CATGCAACCCAAAAAGAGTCGAAGACTTGGTCTGAGTCGAAGTCGCTATT AGTACACATTAAGTAAGCGTTGCTTTATACCCAAAATATTTAAACCGCTG GCCGATTTGAAATGGGTAGAGATTTAGTTGAATTAATTAAGGTATGCCAT TAGTGGTCTCATCATGACAGATTGAATAATTGTATAAGTTATCATAATAA GCGTTTTTTGTTAAGTGCACCTTATAAGGAAATAAACGATCCGATAAGGG CCACCCGCTAACCAACTTCCTTAAAGGTGCCCACTTACGAGTTCCGCGAA AAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Brca2-RA | 3383 | Brca2-RA | 173..3373 | 5..3205 | 16005 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 20413152..20415496 | 853..3198 | 11575 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 20412185..20412963 | 5..783 | 3880 | 99.9 | Plus |
chr2R | 21145070 | chr2R | 20413020..20413093 | 780..853 | 370 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 24527236..24529588 | 853..3205 | 11765 | 100 | Plus |
2R | 25286936 | 2R | 24526269..24527047 | 5..783 | 3895 | 100 | Plus |
2R | 25286936 | 2R | 24527104..24527177 | 780..853 | 370 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 24528435..24530787 | 853..3205 | 11765 | 100 | Plus |
2R | 25260384 | 2R | 24527468..24528246 | 5..783 | 3895 | 100 | Plus |
2R | 25260384 | 2R | 24528303..24528376 | 780..853 | 370 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Quasimodo | 7387 | Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. | 6269..6356 | 1811..1900 | 129 | 64.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 20412180..20412961 | 1..781 | 99 | -> | Plus |
chr2R | 20413022..20413093 | 782..853 | 100 | -> | Plus |
chr2R | 20413153..20415496 | 854..3198 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30169-RA | 1..2916 | 37..2952 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Brca2-RA | 1..2916 | 37..2952 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Brca2-RA | 1..2916 | 37..2952 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30169-RA | 1..2916 | 37..2952 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Brca2-RA | 1..2916 | 37..2952 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30169-RA | 65..3263 | 1..3198 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Brca2-RA | 65..3263 | 1..3198 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Brca2-RA | 93..3291 | 1..3198 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30169-RA | 65..3263 | 1..3198 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Brca2-RA | 93..3291 | 1..3198 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24526264..24527045 | 1..781 | 99 | -> | Plus |
2R | 24527106..24527177 | 782..853 | 100 | -> | Plus |
2R | 24527237..24529581 | 854..3198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24526264..24527045 | 1..781 | 99 | -> | Plus |
2R | 24527106..24527177 | 782..853 | 100 | -> | Plus |
2R | 24527237..24529581 | 854..3198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24526264..24527045 | 1..781 | 99 | -> | Plus |
2R | 24527106..24527177 | 782..853 | 100 | -> | Plus |
2R | 24527237..24529581 | 854..3198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 20413787..20414568 | 1..781 | 99 | -> | Plus |
arm_2R | 20414629..20414700 | 782..853 | 100 | -> | Plus |
arm_2R | 20414760..20417104 | 854..3198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24527481..24528262 | 1..781 | 99 | -> | Plus |
2R | 24528323..24528394 | 782..853 | 100 | -> | Plus |
2R | 24528454..24530798 | 854..3198 | 100 | Plus |
Translation from 36 to 2951
> LP23835.pep MDQNGASGSHPNRLSQGRGAHARERGATVSAAANRSNIIDEMAKICEADR QTFAIARRTRGHERLAVDNSDFVAVEDLILSYAEPTPEDQVEMIMSDFCS SPTYAEDEDEPSHESEPWFRFRNKRIRTYSRKRDPKSHKAVQNEKRRGSS GLSVQRDLNTSFTSMACDFDASSQKIHEVLLNLSQYFSATATASGPTPVP SQIDLPTEARQDSGDECFNAELENLRDDLLQSGFTFEASFYENEHEQEGP GTMADTIYGDSMQSVPTTRLRLESGKRNVWSDADSTLKKADVEIAENKKL LMGQTQAKNVDIEENTNFILEGIPLSEWLTPMELPEISKDVIKHIPDKKL KLEPSSQKEQKSSKDSNASKVRGASKQSCDINTKNEGTTILDQPNAAEQE NLLNDGELLEEFLFNDWQPMQCSNGPSTSKNAIQGPKENINSINLDDKEQ PEKQTPNKSQTISSHQLNGIRKKSFKFIEVSEEMKIKGEEFVDKVVSGLY HFSHKCNLRTEEYSDNHSQVMESTQCAEFKSAPSKPIEILDGKETYNAIA KVDVGEINGKFSPLNNDTIAEPEFCGFRTASNKAIPISEKMKIKTAEFMA EFQSKETIQQNDYLVHQPNDKPTSVGLDTALKRSIESSEEMRSKASKLVV VDTTMREPHQPTLDPVCRDLNESQFFGFRTASNKAIEITEAMEKRGAMFL AQSKATDQLNGWQPSDFPDVLPTSPNNEIHSINVENNKAVNTKTVSETEF FGFRTASNKGIVISENTKIKVAQFMSEFQAADASTDSNQPTVISEESRNI DAKFVDEAAAEDSANKPTFCNVQSLKNTSDIEHFKHDFFVEHSAKEEHPL CSQPLVRTPRRSQEIHSSLSQLAGKSPLDQATKKSVIARRNLLSLKRKRK IILSTETSTSCALPTMERFAPKPSSTSTPLADRDLNRSKDCTKNRQDAED MSPICMQPKKSRRLGLSRSRY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13624-PA | 475 | GF13624-PA | 40..266 | 37..239 | 385 | 42 | Plus |
Dana\GF13624-PA | 475 | GF13624-PA | 356..475 | 851..971 | 321 | 55.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22975-PA | 934 | GG22975-PA | 1..921 | 1..958 | 2956 | 62.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19997-PA | 796 | GH19997-PA | 385..789 | 576..970 | 297 | 29.4 | Plus |
Dgri\GH19997-PA | 796 | GH19997-PA | 18..354 | 7..335 | 220 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Brca2-PA | 971 | CG30169-PA | 1..971 | 1..971 | 4997 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19177-PA | 374 | GI19177-PA | 60..367 | 678..970 | 229 | 29.3 | Plus |
Dmoj\GI16962-PA | 307 | GI16962-PA | 118..240 | 91..205 | 206 | 44.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20217-PA | 1243 | GL20217-PA | 49..816 | 38..805 | 656 | 30.4 | Plus |
Dper\GL20217-PA | 1243 | GL20217-PA | 1132..1243 | 858..971 | 273 | 50.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\Brca2-PB | 1264 | GA15693-PB | 44..892 | 38..805 | 661 | 30.4 | Plus |
Dpse\Brca2-PB | 1264 | GA15693-PB | 1153..1264 | 858..971 | 272 | 50.4 | Plus |
Dpse\Brca2-PB | 1264 | GA15693-PB | 759..1008 | 469..705 | 174 | 30.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11870-PA | 938 | GM11870-PA | 1..938 | 1..971 | 4092 | 81.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11868-PA | 944 | GD11868-PA | 1..944 | 1..971 | 4167 | 82.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20238-PA | 955 | GJ20238-PA | 111..719 | 76..701 | 290 | 26.1 | Plus |
Dvir\GJ20238-PA | 955 | GJ20238-PA | 579..948 | 617..970 | 270 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14413-PA | 926 | GE14413-PA | 1..926 | 1..971 | 2775 | 59.4 | Plus |
Translation from 36 to 2951
> LP23835.hyp MDQNGASGSHPNRLSQGRGAHARERGATVSAAANRSNIIDEMAKICEADR QTFAIARRTRGHERLAVDNSDFVAVEDLILSYAEPTPEDQVEMIMSDFCS SPTYAEDEDEPSHESEPWFRFRNKRIRTYSRKRDPKSHKAVQNEKRRGSS GLSVQRDLNTSFTSMACDFDASSQKIHEVLLNLSQYFSATATASGPTPVP SQIDLPTEARQDSGDECFNAELENLRDDLLQSGFTFEASFYENEHEQEGP GTMADTIYGDSMQSVPTTRLRLESGKRNVWSDADSTLKKADVEIAENKKL LMGQTQAKNVDIEENTNFILEGIPLSEWLTPMELPEISKDVIKHIPDKKL KLEPSSQKEQKSSKDSNASKVRGASKQSCDINTKNEGTTILDQPNAAEQE NLLNDGELLEEFLFNDWQPMQCSNGPSTSKNAIQGPKENINSINLDDKEQ PEKQTPNKSQTISSHQLNGIRKKSFKFIEVSEEMKIKGEEFVDKVVSGLY HFSHKCNLRTEEYSDNHSQVMESTQCAEFKSAPSKPIEILDGKETYNAIA KVDVGEINGKFSPLNNDTIAEPEFCGFRTASNKAIPISEKMKIKTAEFMA EFQSKETIQQNDYLVHQPNDKPTSVGLDTALKRSIESSEEMRSKASKLVV VDTTMREPHQPTLDPVCRDLNESQFFGFRTASNKAIEITEAMEKRGAMFL AQSKATDQLNGWQPSDFPDVLPTSPNNEIHSINVENNKAVNTKTVSETEF FGFRTASNKGIVISENTKIKVAQFMSEFQAADASTDSNQPTVISEESRNI DAKFVDEAAAEDSANKPTFCNVQSLKNTSDIEHFKHDFFVEHSAKEEHPL CSQPLVRTPRRSQEIHSSLSQLAGKSPLDQATKKSVIARRNLLSLKRKRK IILSTETSTSCALPTMERFAPKPSSTSTPLADRDLNRSKDCTKNRQDAED MSPICMQPKKSRRLGLSRSRY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Brca2-PA | 971 | CG30169-PA | 1..971 | 1..971 | 4997 | 100 | Plus |