Clone LP24278 Report

Search the DGRC for LP24278

Clone and Library Details

Library:LP
Tissue Source:Drosophila melanogaster larval-early pupal
Created by:Ling Hong
Date Registered:1998-06-11
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:242
Well:78
Vector:pOT2
Associated Gene/TranscriptCrag-RB
Protein status:LP24278.pep: gold
Sequenced Size:5581

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Crag 2008-04-29 Release 5.5 accounting
Crag 2008-04-29 Picked prior to 5.5
Crag 2008-08-15 Release 5.9 accounting
Crag 2008-12-18 5.12 accounting

Clone Sequence Records

LP24278.complete Sequence

5581 bp assembled on 2007-09-19

GenBank Submission: BT031006

> LP24278.complete
CTCTTGCAGAGGAAACGGCGCCGCCATGGAGGAAAAGCGCATCGCCGACT
ACTTTGTGGTGGCCGGAATGCCGGAGAATCCGCAGCTGCTGCAGGAGAAC
AGCTTCAATGACTCGGGAAGATTGAGAGCGGCCACCACCATCGAACCGAT
CACGGACATCGGCGTCTATTTCCCGCTGCTGGGCGAGGAGGTGCCCGAGG
GATACGAGATCCTCTCGCACACGCCCACGGGTCTACAGGCGAACCTCAAT
CACGGATCGGTCCGCACCACCGACTGCTACATCTACTTCCGGCGTGGCAA
GGATCGCCCGCCGCTGGTGGACATAGGAGTCCTGTACGATGGCCACGAGC
GGATCATGTCGGATGCGGAAATCGTTGCGGAGACGCCTGGCGGCAGGGTG
GCCAATGTGAACAACTCGTCCGCGAAGACGTTCCTCACGTACCGACGCGC
CCGAGCGGACATGCCCTGCAACGAGCTGGTGGTCACCGAACTGTGCGTCA
TTGTCCAGAGCAAGGGTGAGCGGGCTCCGCACGCCTTTTGCCTAATCTAC
AAGACCCTGAACAAGGGCTATGTTGGCAGCGACGTCTACCTGTGCTACAA
GAAGTCCATGTACCGGCCTAAGCACATCAGCTACAAGCCGGAGATCCTGC
TGCGCTACCCCACCTTCGACCACACCGACTTCCCGCTGAATCTGTGCCCG
AGCGTGCCGCTCTTCTGCCTGCCAATGGGCGCCTCCCTGGAGGCCTGGCC
ACACGTCAACGGCACGGAGAAGCGGAAACCCATCAGTCCGGTGTTCAGCA
CTTTTGTGCTCACCGTGAGCGATGGCACCTACAAGGTTTACGGATCGGCG
TTAACTTTCTACGAGGATTACGATGAGTCAAAGTTGTCGGCTGAGCAGAA
GGAGCTGCTCGGTTGGGACGAGGAGTTCGGCGCCCAGCACTCGCTGCACA
TGATCAAGGCTATATGTCTGCTGTCGCATCATCCCTTTGGCGACACCTTC
GACAAATGGCTGAAGTACCTTCATCGAATGGTTCTGTATGACGTTAATAT
ACCCATTCCCGTGGAGCGCTACATCACCCAGCTGCTGGACGAAGTACCGT
TTCCGGCGCCCAGCATTCACCTGCAGCTGTCCAGCGAGTCCAACGATCGC
ATACTGCTCACACAGCCGGAAGATTCCCCGCTGCCGCGAAGTGGCGCCGG
TTTCCACATACTGCTCCAGAACCTGGGCACCGACAACTGTCTGCATGTGC
TGCTGCTGGCCCTCACCGAACAGAAGATACTCATCCACTCACTCAGACCT
GCCACGTTGACTGCTGTGGCCGAAGCCATTGTCTCCCTGCTGTTTCCGTT
CAAGTGGCAGTGTCCGTACATCCCACTTTGTCCGCTGGGCTTGGCGGAGG
TGCTCCATGCCCCATTGCCTTATCTCATTGGCGTGGACTCGCGCTTCTTC
GATTTGTACGAGCCGCCCACGGATGTCACCTGCATCGATTTGGACACCAA
CAACATTAGCCTATGTGAGTCGCAGCGTCACTTGTCACCCAAGCTGCTGC
CGAAACGGGCAGCCCGCCTACTTCGCCAGACGCTCACCGAACTGGAGAAT
GCCAAGCCCATTAGCTATGACTCCACAAACAGTTTGGATCGCGATATTCG
AAAGCGGAAACGAGAACTGGTGCTGGAGCAGCGCATCCAGGAGGCCTTTC
TGCTCTTCATGGCCAGCATTCTGCGCGGCTACAGAGACTTTCTGGTGCCC
ATATCCAAGGCACCATCGGTGGGAGCCACCGATCCAAGTGCCCTCTTCCA
GCTGAAGGCTTTTTTGCGATCGCGTGATAAGTCGCACCAGAAGTTCTTCG
AGCTGATGATGAAGACCCAGATGTTCATCCGTTTCATTGAGGAGCGTTCC
TTTGTCTCCGATGGCGATCATGGTCTCAGCTTCTTCGACGAGTGTGCGGA
GAAGGTGGGCAACTACGATGAAACGCCCGCCCAGCTGCATTTGGTGGACT
GGGACACGGGGCAGAACAGCGAGCGCACCAAGTACATCTTTCCGCCGGAC
AGCGTAACTCCGGCGGGATCTCAGCCTGGCGGCGGAGGAGGAGGATTAGC
CTACAACTACGAGAACTTTACGCTGCAACCGGAACTGTTGCAGAGCACGA
AGAAGACGGCTTTATCGAAATTTCTGCAGCTGCAGCTGAACGCTTCCCTC
TCGCCAGGATCACCCATTGCCCGGCGAACCAAACACGAGATTAAGCTGTC
CCAGAAGATGGCCAGCCGTTGTCAGCAGCATCCGGAGGCGTGGTCCAAAT
ACTTGTTGGCCACCTGTTACTCGCTGTACTTCCTCATCCTGCCATCCATG
GTCTTGGATCCGCGGCACGCCGGCAAGGAGCCAGAGATACTGCGCGCCGC
CTACGATGTCCTCGTGCGAGCCAGTCGTCTAAAGATCACCTGTGACGAGT
TCTGCTACAGGATCATGATGCAGCTATGCGGTATTCACAATCTGCCTGTG
CTGGCCGTCCGTCTGCACTACCTGATGAAACGCTCTGGCGTGCAGGCCAA
TGCGCTCACCTATGGCTTCTACAACCGCTGCGTCCTTGAGTCGCAGTGGC
CCCAGGACAGTACCACGATCAGCCAGATCCGCTGGAATCGCATTAAGAAC
GTGGTGTTGGGAGCGGCGCAGTTCCGCAAGGCTGGCAAACAAAGGGCCGC
CTCCAAGGTGAACAAGTCGCTCAGTGCGTCCCAGGACCAGAACCTCAGCA
CCCTGGAAACGGTGGACGGACAGTCGCGCACCAGTTTGGCTTCCTCCTCC
GGCGATGGCGGTGGCCATGGACTGCTCGATTTTGCCGCCTTCGATCGGCT
CAGGAACAAGTTGGGCAGCATTGTGCGGCAGACGGTGACGGGCGGCAATA
ACGAGACAATGGGCGATGCGGTCAACAACACTGGGTTGCTCATACCCGGC
GAACTCAGCGCCCCGAATACGCCGACCTATGGCGGTGACACCGAAATCCT
GGCCAAGGCACTTCAGCAACAGCAGCCACGCAAACAGATCATGAGCATTG
GCGGCGGCGATGACGATGATGAGGATGAGGACGAAGATGAATACACGGCC
GGATCGCCGAGCACGCCGCAAAAGCAACTGGAAGCGGGCGCCGATGACCT
GGAATACGCCGGTGGAGGAGACTACGAGGCGGACGAGGAGGACGAAGATG
AAGTCGACGAGCATGTGGCCGCACAGCGGGCACGTCAGCGAGTGCAGAGT
CCAACCAAAATCTCGCCACGCACGCCCGTGACCCAAAACGATCCACTGGG
TGCTCTCAACGAGGAGGAGTCCGCCGCCAGTGCCACGCCCACGCAGGAGA
CGCAGCAGGAGCAGCAGCACTCACAGTCGCAGATCGACAGCAGCATATAC
AGCGACAAGCCGATCCTGTTCCGGGGCCAGAGGAGCGCCACTTTCGACGA
GTCGACGCAGATCGGGAAGAGTATGCACCGTTCGGAAACGATGCCGGTGG
CCAGCAGCGGTGTGACCAACAGCCTGGCCAACATCGGATCCTCGCTGAAG
TTCACGTTCGGTCCCAGCTTGACGGGCAAGAAGTCGAACGAGTTGATCCA
GGGCAGTCTGAGCAGCATCAAATCGGCGGCCAATTCGCTGACCAAAAAGT
TCGACGAGATCAAAGGCGTGATATCGGCCAATTCAACGCCGACGAAAACG
AACAATGGACACCATCCGCATGGCCTGCATCATGGTCACCATCATCCGCA
CCACCACCATCATCATCATTCGCAGCACGGCAATGCGGAGCAGGAGGAGC
ACGATGCCGCCGTCCACGAGGAGGGCAAGCTGCGTCGCGTCTCAAGCGAC
CTGGATCCATGGGGCAGGCTCAGCGAGTCGCGTAAATCCAGCTACAATAA
CCTCGTGCCGCTCGGCGAGAACAGCTCCACCGGCGCCCTTCACATGCACG
CCTTTCCCGCTGTGCCCGACAACCTCTATAGTCTAACAAGCGAGAACGCC
GCGGATCGTGACTGCGATGTGCTGATCCAGCTGACGACCTGCTCGCAGTG
CCACAATTGCTCGGTGCTCGTCTACGACGAGGAGATCATGAGCGGCTGGA
CGGCGGAGGACTCTAACCTGAACACCACCTGCCATGCCTGCAACAAGCTC
ACGGTGCCTTTCCTCAGCGTACAGATCGAACGGCAGGTGGAGGAGTCGGA
ACAGTCGGATCCGCTGCAGGACGGCAAGGAGCAAATAGCCAACGGCAATA
GCCACAAGACCAGCCTGACCGTGCCGTATCTAAATCCGCTGGTGCTGCGC
AAGGAGCTGGAGAACATACTCACGCAGGAGGGCGACATTGCGCTGATAAA
ACCGGAATTTGTCGATGAGCACCCGATCATCTATTGGAACTTGCTCTGGC
TGATGGAGCGCATCGAGAGCAAGACGCACCTGCCCGAGCTCTGTCTGCCC
GTGCCGAGCGACAAGGAGCACATCGATCCGCTGAGCAAGGTGAAGACGGT
GCACATCCAGTGCCTGTGGGACAATCTGAGCCTGCATACGGAGGCCAGTG
GTCCACCCATGTACTTGCTGTACAGGGAGACCCAGCCGACGAGTCCGCTC
ATCAAGGCGCTGCTCACCGATCAGGCGCAGCTCAACAAGAATGTCATTCA
GCAAATCATTTCGGCCATCCGGTGCAATGACTTCGCCACTCCTCTCAAGC
GCTTGGCCAATGAGCGACACAAGCTGAAGAGCAACGGCGTGGAGCGATCG
CACTCGTTCTATCGCGACATACTCTTCCTGGCCCTGACCGCCATCGGTAG
GTCCAACGTGGACCTGGCCACATTCCATCGCGAGTATGCAGCCGTGTTCG
ACAAGCTGACGGAGCGGGAGTGCAACATGTACTATCGCAATCAGGATCTG
CCGCCCTCGGCATCGACGATCTTCTGTCGTGCTTACTTCCGCCCGCTTCT
GCTGCCCTGACGCAGTGGCTCCCAGCTGGAGGCAGGAGCAGCTTCAAGCG
ATGCCGAAGTGGACACATGAGTGGAGCAGCCGAAGCCTAAAAGACAAGAC
GACCAAATAACTTGATAACAAAATGGAAACGAAGGGAGAGTTTGACGACA
ACGAAACGCTTATCACACACCTTAGGCTGGGTCGATTTTATAGATGGGAC
AAGTATGAATTAATTTTACTTAGATATCAGAGCTCTTATTTACGTTACGG
AAAAGAAAAGGACGGTATTTTGGAACTATTCCTAGTAGGCTATAAAAATG
TAATTGTTTTAAACGAAAAAAAAAAAATACTTGATTCGAAGTGTTCTTAG
GTTTTCAAACTAATAGTTTTTTCCCAAGCGAGGAAGCCTTCTGGGCAAAC
TTCTTTAGAATTGTCCTCAATTTACTTGTACTTGTACACAAGCCAGAATA
TTTAAATTCTTAAACGAACTTTCCTAAGTGAAAGCCCCAACTTGACATGT
GTTGCATTGTGAAAACATGCAAATGATTTTGTAAATGACTTGATCTTAAC
ATTTAAGTACTTAACGATTTTTCGCTGTTTAAAACTAATCAAAAATATAC
ACACACACACACGAAAAAAAAAAAAAAAAAA

LP24278.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:35:57
Subject Length Description Subject Range Query Range Score Percent Strand
Crag-RC 5908 Crag-RC 51..5615 1..5565 27825 100 Plus
Crag-RA 6223 Crag-RA 550..4101 10..3561 17760 100 Plus
Crag.e 6719 Crag.e 550..4101 10..3561 17760 100 Plus
Crag-RA 6223 Crag-RA 4182..6186 3561..5565 10025 100 Plus
Crag.e 6719 Crag.e 4182..6186 3561..5565 10025 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:07:39
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 8487683..8489111 1830..3258 7130 99.9 Plus
chrX 22417052 chrX 8492072..8492993 4642..5563 4580 99.8 Plus
chrX 22417052 chrX 8485848..8486396 325..873 2745 100 Plus
chrX 22417052 chrX 8491288..8491751 3993..4456 2245 98.9 Plus
chrX 22417052 chrX 8490792..8491225 3561..3994 2095 98.8 Plus
chrX 22417052 chrX 8485228..8485554 1..327 1635 100 Plus
chrX 22417052 chrX 8487295..8487615 1511..1831 1605 100 Plus
chrX 22417052 chrX 8489169..8489471 3259..3561 1515 100 Plus
chrX 22417052 chrX 8486668..8486939 1025..1296 1360 100 Plus
chrX 22417052 chrX 8487002..8487218 1294..1510 1085 100 Plus
chrX 22417052 chrX 8491823..8492008 4456..4641 930 100 Plus
chrX 22417052 chrX 8486455..8486605 874..1024 755 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:59:54 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:07:36
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8595926..8597354 1830..3258 7145 100 Plus
X 23542271 X 8600310..8601233 4642..5565 4620 100 Plus
X 23542271 X 8594091..8594639 325..873 2745 100 Plus
X 23542271 X 8599526..8599989 3993..4456 2320 100 Plus
X 23542271 X 8599030..8599463 3561..3994 2170 100 Plus
X 23542271 X 8593471..8593797 1..327 1635 100 Plus
X 23542271 X 8595538..8595858 1511..1831 1605 100 Plus
X 23542271 X 8597412..8597714 3259..3561 1515 100 Plus
X 23542271 X 8594911..8595182 1025..1296 1360 100 Plus
X 23542271 X 8595245..8595461 1294..1510 1085 100 Plus
X 23542271 X 8600061..8600246 4456..4641 930 100 Plus
X 23542271 X 8594698..8594848 874..1024 755 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:32:43
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 8604024..8605452 1830..3258 7145 100 Plus
X 23527363 X 8608408..8609331 4642..5565 4620 100 Plus
X 23527363 X 8602189..8602737 325..873 2745 100 Plus
X 23527363 X 8607624..8608087 3993..4456 2320 100 Plus
X 23527363 X 8607128..8607561 3561..3994 2170 100 Plus
X 23527363 X 8601569..8601895 1..327 1635 100 Plus
X 23527363 X 8603636..8603956 1511..1831 1605 100 Plus
X 23527363 X 8605510..8605812 3259..3561 1515 100 Plus
X 23527363 X 8603009..8603280 1025..1296 1360 100 Plus
X 23527363 X 8603343..8603559 1294..1510 1085 100 Plus
X 23527363 X 8608159..8608344 4456..4641 930 100 Plus
X 23527363 X 8602796..8602946 874..1024 755 100 Plus
Blast to na_te.dros performed on 2019-03-16 22:07:37 has no hits.

LP24278.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:08:39 Download gff for LP24278.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 8485228..8485553 1..326 100 -> Plus
chrX 8485850..8486396 327..873 100 -> Plus
chrX 8486455..8486605 874..1024 100 -> Plus
chrX 8486668..8486939 1025..1296 100 -> Plus
chrX 8487005..8487218 1297..1510 100 -> Plus
chrX 8487295..8487615 1511..1831 100 -> Plus
chrX 8487685..8489111 1832..3258 99 -> Plus
chrX 8489169..8489471 3259..3561 100 -> Plus
chrX 8490793..8491225 3562..3994 89 -> Plus
chrX 8491290..8491751 3995..4456 98 -> Plus
chrX 8491824..8492008 4457..4641 100 -> Plus
chrX 8492072..8492993 4642..5563 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:45:02 Download gff for LP24278.complete
Subject Subject Range Query Range Percent Splice Strand
Crag-RB 1..4935 26..4960 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:05:58 Download gff for LP24278.complete
Subject Subject Range Query Range Percent Splice Strand
Crag-RB 1..4935 26..4960 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:08:54 Download gff for LP24278.complete
Subject Subject Range Query Range Percent Splice Strand
Crag-RB 1..4935 26..4960 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:52:15 Download gff for LP24278.complete
Subject Subject Range Query Range Percent Splice Strand
Crag-RB 1..4935 26..4960 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:33:59 Download gff for LP24278.complete
Subject Subject Range Query Range Percent Splice Strand
Crag-RB 1..4935 26..4960 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:00:40 Download gff for LP24278.complete
Subject Subject Range Query Range Percent Splice Strand
Crag-RB 532..6078 1..5548 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:05:58 Download gff for LP24278.complete
Subject Subject Range Query Range Percent Splice Strand
Crag-RC 1..5563 1..5563 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:08:54 Download gff for LP24278.complete
Subject Subject Range Query Range Percent Splice Strand
Crag-RB 554..6115 1..5563 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:52:15 Download gff for LP24278.complete
Subject Subject Range Query Range Percent Splice Strand
Crag-RB 532..6078 1..5548 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:33:59 Download gff for LP24278.complete
Subject Subject Range Query Range Percent Splice Strand
Crag-RB 554..6115 1..5563 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:08:39 Download gff for LP24278.complete
Subject Subject Range Query Range Percent Splice Strand
X 8594911..8595182 1025..1296 100 -> Plus
X 8600062..8600246 4457..4641 100 -> Plus
X 8595248..8595461 1297..1510 100 -> Plus
X 8593471..8593796 1..326 100 -> Plus
X 8594093..8594639 327..873 100 -> Plus
X 8594698..8594848 874..1024 100 -> Plus
X 8595538..8595858 1511..1831 100 -> Plus
X 8595928..8597354 1832..3258 100 -> Plus
X 8597412..8597714 3259..3561 100 -> Plus
X 8599031..8599463 3562..3994 100 -> Plus
X 8599528..8599989 3995..4456 100 -> Plus
X 8600310..8601231 4642..5563 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:08:39 Download gff for LP24278.complete
Subject Subject Range Query Range Percent Splice Strand
X 8594911..8595182 1025..1296 100 -> Plus
X 8600062..8600246 4457..4641 100 -> Plus
X 8595248..8595461 1297..1510 100 -> Plus
X 8593471..8593796 1..326 100 -> Plus
X 8594093..8594639 327..873 100 -> Plus
X 8594698..8594848 874..1024 100 -> Plus
X 8595538..8595858 1511..1831 100 -> Plus
X 8595928..8597354 1832..3258 100 -> Plus
X 8597412..8597714 3259..3561 100 -> Plus
X 8599031..8599463 3562..3994 100 -> Plus
X 8599528..8599989 3995..4456 100 -> Plus
X 8600310..8601231 4642..5563 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:08:39 Download gff for LP24278.complete
Subject Subject Range Query Range Percent Splice Strand
X 8594911..8595182 1025..1296 100 -> Plus
X 8600062..8600246 4457..4641 100 -> Plus
X 8595248..8595461 1297..1510 100 -> Plus
X 8593471..8593796 1..326 100 -> Plus
X 8594093..8594639 327..873 100 -> Plus
X 8594698..8594848 874..1024 100 -> Plus
X 8595538..8595858 1511..1831 100 -> Plus
X 8595928..8597354 1832..3258 100 -> Plus
X 8597412..8597714 3259..3561 100 -> Plus
X 8599031..8599463 3562..3994 100 -> Plus
X 8599528..8599989 3995..4456 100 -> Plus
X 8600310..8601231 4642..5563 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:08:54 Download gff for LP24278.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 8487504..8487829 1..326 100 -> Plus
arm_X 8488126..8488672 327..873 100 -> Plus
arm_X 8488731..8488881 874..1024 100 -> Plus
arm_X 8488944..8489215 1025..1296 100 -> Plus
arm_X 8489281..8489494 1297..1510 100 -> Plus
arm_X 8489571..8489891 1511..1831 100 -> Plus
arm_X 8489961..8491387 1832..3258 100 -> Plus
arm_X 8491445..8491747 3259..3561 100 -> Plus
arm_X 8493064..8493496 3562..3994 100 -> Plus
arm_X 8493561..8494022 3995..4456 100 -> Plus
arm_X 8494095..8494279 4457..4641 100 -> Plus
arm_X 8494343..8495264 4642..5563 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:58:12 Download gff for LP24278.complete
Subject Subject Range Query Range Percent Splice Strand
X 8605510..8605812 3259..3561 100 -> Plus
X 8601569..8601894 1..326 100 -> Plus
X 8602191..8602737 327..873 100 -> Plus
X 8602796..8602946 874..1024 100 -> Plus
X 8603009..8603280 1025..1296 100 -> Plus
X 8603346..8603559 1297..1510 100 -> Plus
X 8603636..8603956 1511..1831 100 -> Plus
X 8604026..8605452 1832..3258 100 -> Plus
X 8607129..8607561 3562..3994 100 -> Plus
X 8607626..8608087 3995..4456 100 -> Plus
X 8608160..8608344 4457..4641 100 -> Plus
X 8608408..8609329 4642..5563 100   Plus

LP24278.hyp Sequence

Translation from 0 to 4959

> LP24278.hyp
SCRGNGAAMEEKRIADYFVVAGMPENPQLLQENSFNDSGRLRAATTIEPI
TDIGVYFPLLGEEVPEGYEILSHTPTGLQANLNHGSVRTTDCYIYFRRGK
DRPPLVDIGVLYDGHERIMSDAEIVAETPGGRVANVNNSSAKTFLTYRRA
RADMPCNELVVTELCVIVQSKGERAPHAFCLIYKTLNKGYVGSDVYLCYK
KSMYRPKHISYKPEILLRYPTFDHTDFPLNLCPSVPLFCLPMGASLEAWP
HVNGTEKRKPISPVFSTFVLTVSDGTYKVYGSALTFYEDYDESKLSAEQK
ELLGWDEEFGAQHSLHMIKAICLLSHHPFGDTFDKWLKYLHRMVLYDVNI
PIPVERYITQLLDEVPFPAPSIHLQLSSESNDRILLTQPEDSPLPRSGAG
FHILLQNLGTDNCLHVLLLALTEQKILIHSLRPATLTAVAEAIVSLLFPF
KWQCPYIPLCPLGLAEVLHAPLPYLIGVDSRFFDLYEPPTDVTCIDLDTN
NISLCESQRHLSPKLLPKRAARLLRQTLTELENAKPISYDSTNSLDRDIR
KRKRELVLEQRIQEAFLLFMASILRGYRDFLVPISKAPSVGATDPSALFQ
LKAFLRSRDKSHQKFFELMMKTQMFIRFIEERSFVSDGDHGLSFFDECAE
KVGNYDETPAQLHLVDWDTGQNSERTKYIFPPDSVTPAGSQPGGGGGGLA
YNYENFTLQPELLQSTKKTALSKFLQLQLNASLSPGSPIARRTKHEIKLS
QKMASRCQQHPEAWSKYLLATCYSLYFLILPSMVLDPRHAGKEPEILRAA
YDVLVRASRLKITCDEFCYRIMMQLCGIHNLPVLAVRLHYLMKRSGVQAN
ALTYGFYNRCVLESQWPQDSTTISQIRWNRIKNVVLGAAQFRKAGKQRAA
SKVNKSLSASQDQNLSTLETVDGQSRTSLASSSGDGGGHGLLDFAAFDRL
RNKLGSIVRQTVTGGNNETMGDAVNNTGLLIPGELSAPNTPTYGGDTEIL
AKALQQQQPRKQIMSIGGGDDDDEDEDEDEYTAGSPSTPQKQLEAGADDL
EYAGGGDYEADEEDEDEVDEHVAAQRARQRVQSPTKISPRTPVTQNDPLG
ALNEEESAASATPTQETQQEQQHSQSQIDSSIYSDKPILFRGQRSATFDE
STQIGKSMHRSETMPVASSGVTNSLANIGSSLKFTFGPSLTGKKSNELIQ
GSLSSIKSAANSLTKKFDEIKGVISANSTPTKTNNGHHPHGLHHGHHHPH
HHHHHHSQHGNAEQEEHDAAVHEEGKLRRVSSDLDPWGRLSESRKSSYNN
LVPLGENSSTGALHMHAFPAVPDNLYSLTSENAADRDCDVLIQLTTCSQC
HNCSVLVYDEEIMSGWTAEDSNLNTTCHACNKLTVPFLSVQIERQVEESE
QSDPLQDGKEQIANGNSHKTSLTVPYLNPLVLRKELENILTQEGDIALIK
PEFVDEHPIIYWNLLWLMERIESKTHLPELCLPVPSDKEHIDPLSKVKTV
HIQCLWDNLSLHTEASGPPMYLLYRETQPTSPLIKALLTDQAQLNKNVIQ
QIISAIRCNDFATPLKRLANERHKLKSNGVERSHSFYRDILFLALTAIGR
SNVDLATFHREYAAVFDKLTERECNMYYRNQDLPPSASTIFCRAYFRPLL
LP*

LP24278.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:26:08
Subject Length Description Subject Range Query Range Score Percent Strand
Crag-PB 1644 CG12737-PB 1..1644 9..1652 8631 100 Plus
Crag-PD 1671 CG12737-PD 1..1671 9..1652 8593 98.4 Plus
Crag-PA 1671 CG12737-PA 1..1671 9..1652 8593 98.4 Plus
Sbf-PB 1973 CG6939-PB 32..452 214..632 323 27.3 Plus
Sbf-PA 1993 CG6939-PA 32..452 214..632 323 27.3 Plus

LP24278.pep Sequence

Translation from 25 to 4959

> LP24278.pep
MEEKRIADYFVVAGMPENPQLLQENSFNDSGRLRAATTIEPITDIGVYFP
LLGEEVPEGYEILSHTPTGLQANLNHGSVRTTDCYIYFRRGKDRPPLVDI
GVLYDGHERIMSDAEIVAETPGGRVANVNNSSAKTFLTYRRARADMPCNE
LVVTELCVIVQSKGERAPHAFCLIYKTLNKGYVGSDVYLCYKKSMYRPKH
ISYKPEILLRYPTFDHTDFPLNLCPSVPLFCLPMGASLEAWPHVNGTEKR
KPISPVFSTFVLTVSDGTYKVYGSALTFYEDYDESKLSAEQKELLGWDEE
FGAQHSLHMIKAICLLSHHPFGDTFDKWLKYLHRMVLYDVNIPIPVERYI
TQLLDEVPFPAPSIHLQLSSESNDRILLTQPEDSPLPRSGAGFHILLQNL
GTDNCLHVLLLALTEQKILIHSLRPATLTAVAEAIVSLLFPFKWQCPYIP
LCPLGLAEVLHAPLPYLIGVDSRFFDLYEPPTDVTCIDLDTNNISLCESQ
RHLSPKLLPKRAARLLRQTLTELENAKPISYDSTNSLDRDIRKRKRELVL
EQRIQEAFLLFMASILRGYRDFLVPISKAPSVGATDPSALFQLKAFLRSR
DKSHQKFFELMMKTQMFIRFIEERSFVSDGDHGLSFFDECAEKVGNYDET
PAQLHLVDWDTGQNSERTKYIFPPDSVTPAGSQPGGGGGGLAYNYENFTL
QPELLQSTKKTALSKFLQLQLNASLSPGSPIARRTKHEIKLSQKMASRCQ
QHPEAWSKYLLATCYSLYFLILPSMVLDPRHAGKEPEILRAAYDVLVRAS
RLKITCDEFCYRIMMQLCGIHNLPVLAVRLHYLMKRSGVQANALTYGFYN
RCVLESQWPQDSTTISQIRWNRIKNVVLGAAQFRKAGKQRAASKVNKSLS
ASQDQNLSTLETVDGQSRTSLASSSGDGGGHGLLDFAAFDRLRNKLGSIV
RQTVTGGNNETMGDAVNNTGLLIPGELSAPNTPTYGGDTEILAKALQQQQ
PRKQIMSIGGGDDDDEDEDEDEYTAGSPSTPQKQLEAGADDLEYAGGGDY
EADEEDEDEVDEHVAAQRARQRVQSPTKISPRTPVTQNDPLGALNEEESA
ASATPTQETQQEQQHSQSQIDSSIYSDKPILFRGQRSATFDESTQIGKSM
HRSETMPVASSGVTNSLANIGSSLKFTFGPSLTGKKSNELIQGSLSSIKS
AANSLTKKFDEIKGVISANSTPTKTNNGHHPHGLHHGHHHPHHHHHHHSQ
HGNAEQEEHDAAVHEEGKLRRVSSDLDPWGRLSESRKSSYNNLVPLGENS
STGALHMHAFPAVPDNLYSLTSENAADRDCDVLIQLTTCSQCHNCSVLVY
DEEIMSGWTAEDSNLNTTCHACNKLTVPFLSVQIERQVEESEQSDPLQDG
KEQIANGNSHKTSLTVPYLNPLVLRKELENILTQEGDIALIKPEFVDEHP
IIYWNLLWLMERIESKTHLPELCLPVPSDKEHIDPLSKVKTVHIQCLWDN
LSLHTEASGPPMYLLYRETQPTSPLIKALLTDQAQLNKNVIQQIISAIRC
NDFATPLKRLANERHKLKSNGVERSHSFYRDILFLALTAIGRSNVDLATF
HREYAAVFDKLTERECNMYYRNQDLPPSASTIFCRAYFRPLLLP*

LP24278.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 02:12:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22300-PA 1660 GF22300-PA 1..1660 1..1644 7576 88.6 Plus
Dana\GF16615-PA 1966 GF16615-PA 32..447 206..624 325 26.8 Plus
Dana\GF24770-PA 1445 GF24770-PA 85..434 182..498 192 22 Plus
Dana\GF21221-PA 1946 GF21221-PA 227..457 310..495 192 26.4 Plus
Dana\GF12952-PA 921 GF12952-PA 102..402 312..649 185 23.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 02:12:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18264-PA 1676 GG18264-PA 1..1676 1..1644 8623 95.8 Plus
Dere\GG17190-PA 1974 GG17190-PA 32..452 206..624 336 27.7 Plus
Dere\GG14796-PA 1447 GG14796-PA 90..439 182..498 198 22.6 Plus
Dere\GG17864-PA 2038 GG17864-PA 226..456 310..495 194 26.4 Plus
Dere\GG10581-PA 907 GG10581-PA 102..402 312..649 173 22.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 02:12:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24743-PA 1666 GH24743-PA 1..1666 1..1644 7134 82.1 Plus
Dgri\GH23138-PA 1972 GH23138-PA 32..446 206..624 332 28 Plus
Dgri\GH14502-PA 1455 GH14502-PA 82..431 182..498 195 22.6 Plus
Dgri\GH24643-PA 2131 GH24643-PA 254..484 310..495 195 26.4 Plus
Dgri\GH21489-PA 937 GH21489-PA 91..402 300..649 188 23.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:12:23
Subject Length Description Subject Range Query Range Score Percent Strand
Crag-PB 1644 CG12737-PB 1..1644 1..1644 8631 100 Plus
Crag-PD 1671 CG12737-PD 1..1671 1..1644 8593 98.4 Plus
Crag-PA 1671 CG12737-PA 1..1671 1..1644 8593 98.4 Plus
Sbf-PB 1973 CG6939-PB 32..452 206..624 323 27.3 Plus
Sbf-PA 1993 CG6939-PA 32..452 206..624 323 27.3 Plus
pns-PC 817 CG7852-PC 92..441 182..498 202 22.3 Plus
pns-PA 1449 CG7852-PA 92..441 182..498 202 22.3 Plus
pns-PB 1449 CG7852-PB 92..441 182..498 202 22.3 Plus
Rab3-GEF-PG 1819 CG5627-PG 259..489 310..495 183 26 Plus
Rab3-GEF-PF 1822 CG5627-PF 259..489 310..495 183 26 Plus
Rab3-GEF-PL 1882 CG5627-PL 259..489 310..495 183 26 Plus
Rab3-GEF-PC 2084 CG5627-PC 259..489 310..495 183 26 Plus
Rab3-GEF-PI 2095 CG5627-PI 259..489 310..495 183 26 Plus
Rab3-GEF-PJ 2115 CG5627-PJ 259..489 310..495 183 26 Plus
Rab3-GEF-PE 2124 CG5627-PE 267..497 310..495 183 26 Plus
Rab3-GEF-PD 2130 CG5627-PD 256..486 310..495 183 26 Plus
Rab3-GEF-PK 2147 CG5627-PK 259..489 310..495 183 26 Plus
Rab3-GEF-PH 2154 CG5627-PH 259..489 310..495 183 26 Plus
CG18659-PH 435 CG18659-PH 102..402 312..649 166 23.1 Plus
CG18659-PE 435 CG18659-PE 102..402 312..649 166 23.1 Plus
CG18659-PF 607 CG18659-PF 102..402 312..649 166 23.1 Plus
CG18659-PD 749 CG18659-PD 102..402 312..649 166 23.1 Plus
CG18659-PC 897 CG18659-PC 102..402 312..649 166 23.1 Plus
CG18659-PI 906 CG18659-PI 102..402 312..649 166 23.1 Plus
CG18659-PA 908 CG18659-PA 102..402 312..649 166 23.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 02:12:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14791-PA 1681 GI14791-PA 1..1681 1..1644 7107 82.3 Plus
Dmoj\GI10301-PA 1974 GI10301-PA 32..450 206..624 331 27.9 Plus
Dmoj\GI13278-PA 1454 GI13278-PA 97..446 182..498 194 22 Plus
Dmoj\GI21691-PA 1970 GI21691-PA 215..445 310..495 194 26.4 Plus
Dmoj\GI19461-PA 953 GI19461-PA 197..404 406..649 175 25.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 02:12:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12947-PA 921 GL12947-PA 1..921 309..1179 3761 83.5 Plus
Dper\GL12948-PA 185 GL12948-PA 1..185 1460..1644 940 94.1 Plus
Dper\GL12246-PA 1978 GL12246-PA 32..454 206..624 328 27.9 Plus
Dper\GL15180-PA 1596 GL15180-PA 31..261 310..495 198 26.8 Plus
Dper\GL12946-PA 99 GL12946-PA 1..71 1..71 177 49.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 02:12:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22930-PA 1694 GA22930-PA 1..1694 1..1644 7397 86.3 Plus
Dpse\GA19970-PA 1978 GA19970-PA 32..454 206..624 329 27.9 Plus
Dpse\GA20634-PA 1439 GA20634-PA 96..406 198..470 190 24.5 Plus
Dpse\GA15037-PA 952 GA15037-PA 90..402 301..649 178 23.8 Plus
Dpse\GA29335-PA 1773 GA29335-PA 235..442 310..475 177 26.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 02:12:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21724-PA 1479 GM21724-PA 494..1108 565..1179 2882 99.2 Plus
Dsec\GM21724-PA 1479 GM21724-PA 1..494 1..494 2662 98.2 Plus
Dsec\GM21724-PA 1479 GM21724-PA 1137..1479 1302..1644 1839 98.5 Plus
Dsec\GM26070-PA 1972 GM26070-PA 32..452 206..624 332 27.8 Plus
Dsec\GM14418-PA 1423 GM14418-PA 90..439 182..498 197 22.6 Plus
Dsec\GM12059-PA 2076 GM12059-PA 226..456 310..495 194 26.4 Plus
Dsec\GM20629-PA 476 GM20629-PA 105..312 406..649 165 24.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 02:12:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\Crag-PA 106 GD14079-PA 1..103 1..103 529 96.1 Plus
Dsim\GD20634-PA 1973 GD20634-PA 32..452 206..624 332 27.8 Plus
Dsim\GD13622-PA 1447 GD13622-PA 90..439 182..498 198 22.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 02:12:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18832-PA 1680 GJ18832-PA 1..1680 1..1644 7091 81.9 Plus
Dvir\GJ10154-PA 1979 GJ10154-PA 32..449 206..624 330 27.6 Plus
Dvir\GJ15871-PA 1724 GJ15871-PA 221..451 310..495 193 26.4 Plus
Dvir\GJ12046-PA 1447 GJ12046-PA 86..435 182..498 192 22.8 Plus
Dvir\GJ15119-PA 438 GJ15119-PA 104..404 312..649 165 22.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 02:12:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14763-PA 1696 GK14763-PA 1..1696 1..1644 7115 82.8 Plus
Dwil\GK14310-PA 2000 GK14310-PA 32..461 206..624 342 27.3 Plus
Dwil\GK16189-PA 1989 GK16189-PA 227..457 310..495 195 26.4 Plus
Dwil\GK12563-PA 1648 GK12563-PA 88..439 182..498 179 22.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 02:12:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15795-PA 1673 GE15795-PA 1..1673 1..1644 8652 96.2 Plus
Dyak\GE10084-PA 1973 GE10084-PA 32..452 206..624 333 27.7 Plus
Dyak\GE21158-PA 1449 GE21158-PA 92..441 182..498 198 22.6 Plus
Dyak\GE17167-PA 2166 GE17167-PA 268..498 310..495 195 26.4 Plus
Dyak\GE22543-PA 909 GE22543-PA 102..402 312..649 173 22.8 Plus