Clone MIP01391 Report

Search the DGRC for MIP01391

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:13
Well:91
Vector:pOTB7_DraIII
Associated Gene/TranscriptCG40486-RB
Protein status:MIP01391.pep: gold
Sequenced Size:969

Clone Sequence Records

MIP01391.complete Sequence

969 bp assembled on 2009-04-06

GenBank Submission: BT081977.1

> MIP01391.complete
AGTCAGTTGTGAGGAGAACTGCCTAGGAGCTGGGCCTGGAAGAATACTTA
CTAACAACCAAAATACTCAAAGAGAACCTGGCTTGGGAGGCACAGCATTC
GTAATACTCATCGAGAATCTTAGGGATGGAACGCTGGCATGATCGCGTGG
CTGTGGTCACGGGTGCCAGCTCCGGGATAGGAGCTGCAGTGGCACGCCAC
TTGGTGAGTGCAGGGGTCATTGTTGTAGGTCTGGCCCGTCGGGTCGACCG
CATGAAGGCTATCAAGGAACAACTGCCGCCGGAGCTGCAGGGCCGCCTAC
ATGCCATCCACTGCGATGTCGAAGATCTGGACTCGGTGACGGCTGCCTTT
GACTGGATCGAGGAGCAGCTCGGCGGATGTGACATCCTGGTGAACAACGC
GGGATGCCTGAACCCCGGACAACTTCTCACCCTGGAGCTAGAGCAGCTGC
AGCAGGTCCTGAACGTGAACTTGATGGGCGTGGTCATCTGCACCCGCCGC
GCCTTTCGCTCAATGCAGCAACGCGAGGTGGATGGCCATGTGATCCTCAT
TAACAGCCTAACGGGCCGTAACATCATCAATCCACCTGGTGACGAGCTGC
AGGTGCTCAACATGTATCCGCTTACCAAGCACGGGGTTACGGCCATGTTG
GAAGTCCTGCGACAGGAGCTGCGCGGATTCAAGACTAAGATAAAGGTCAC
AAGCATCACTCCAGGTGTGACCGATACGGAGATTCTGCCCTCCGGCTACG
GTATTTTGCCGATGCTAAAACCGGATGACATTGCCGCAGGCATCATGTAC
GTGCTCGGCACACCCGCACATGTCCAGGTGCACGAGCTGACCATTAAGCC
GTTAGGAGAGCCTTTCTAAGTCCGTCCCGAAATGTCATTACGATAATGAT
AAAAAGACCGTGCGCAGCCAATAAAGTGACTGAAATTGGACAAAAAAAAA
AAAAAAAAAAAAAAAAAAA

MIP01391.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:29:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG40486-RB 1081 CG40486-RB 6..944 1..939 4680 99.8 Plus
CG40486.a 1570 CG40486.a 1..939 1..939 4680 99.8 Plus
CG40486-RA 1203 CG40486-RA 1..687 15..701 3420 99.8 Plus
CG40486-RA 1203 CG40486-RA 964..1201 702..939 1190 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:18:21
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 22355443..22356143 701..1 3490 99.9 Minus
chrX 22417052 chrX 22354929..22355166 939..702 1190 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:00:06 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:18:20
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 22959390..22960090 701..1 3490 99.9 Minus
X 23542271 X 22958876..22959113 939..702 1190 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:46:03
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 22944482..22945182 701..1 3490 99.8 Minus
X 23527363 X 22943968..22944205 939..702 1190 100 Minus
Blast to na_te.dros performed 2019-03-16 18:18:20
Subject Length Description Subject Range Query Range Score Percent Strand
diver 6112 diver Tinker 6112bp 1330..1386 37..89 122 73.7 Plus

MIP01391.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:19:03 Download gff for MIP01391.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 22354927..22355166 702..941 99 <- Minus
chrX 22355443..22356143 1..701 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:08:50 Download gff for MIP01391.complete
Subject Subject Range Query Range Percent Splice Strand
CG40486-RB 1..744 126..869 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:44:02 Download gff for MIP01391.complete
Subject Subject Range Query Range Percent Splice Strand
CG40486-RB 1..744 126..869 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:18:32 Download gff for MIP01391.complete
Subject Subject Range Query Range Percent Splice Strand
CG40486-RB 1..744 126..869 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:38:00 Download gff for MIP01391.complete
Subject Subject Range Query Range Percent Splice Strand
CG40486-RB 1..744 126..869 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-04-06 18:51:49 Download gff for MIP01391.complete
Subject Subject Range Query Range Percent Splice Strand
CG40486-RB 1..925 15..941 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:44:02 Download gff for MIP01391.complete
Subject Subject Range Query Range Percent Splice Strand
CG40486-RB 1..925 15..939 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:18:32 Download gff for MIP01391.complete
Subject Subject Range Query Range Percent Splice Strand
CG40486-RB 1..925 15..939 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:38:00 Download gff for MIP01391.complete
Subject Subject Range Query Range Percent Splice Strand
CG40486-RB 2..940 1..939 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:19:03 Download gff for MIP01391.complete
Subject Subject Range Query Range Percent Splice Strand
X 22958874..22959113 702..941 99 <- Minus
X 22959390..22960090 1..701 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:19:03 Download gff for MIP01391.complete
Subject Subject Range Query Range Percent Splice Strand
X 22958874..22959113 702..941 99 <- Minus
X 22959390..22960090 1..701 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:19:03 Download gff for MIP01391.complete
Subject Subject Range Query Range Percent Splice Strand
X 22958874..22959113 702..941 99 <- Minus
X 22959390..22960090 1..701 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:18:32 Download gff for MIP01391.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 22360710..22360949 702..941 99 <- Minus
arm_X 22361226..22361926 1..701 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:19:06 Download gff for MIP01391.complete
Subject Subject Range Query Range Percent Splice Strand
X 22943966..22944205 702..941 99 <- Minus
X 22944482..22945182 1..701 99   Minus

MIP01391.hyp Sequence

Translation from 125 to 868

> MIP01391.hyp
MERWHDRVAVVTGASSGIGAAVARHLVSAGVIVVGLARRVDRMKAIKEQL
PPELQGRLHAIHCDVEDLDSVTAAFDWIEEQLGGCDILVNNAGCLNPGQL
LTLELEQLQQVLNVNLMGVVICTRRAFRSMQQREVDGHVILINSLTGRNI
INPPGDELQVLNMYPLTKHGVTAMLEVLRQELRGFKTKIKVTSITPGVTD
TEILPSGYGILPMLKPDDIAAGIMYVLGTPAHVQVHELTIKPLGEPF*

MIP01391.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:50:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG40486-PC 247 CG40486-PC 1..247 1..247 1267 100 Plus
CG40486-PB 247 CG40486-PB 1..247 1..247 1267 100 Plus
CG40485-PB 247 CG40485-PB 1..247 1..247 798 61.1 Plus
antdh-PA 250 CG1386-PA 1..248 1..245 694 54.8 Plus
CG8757-PB 252 CG8757-PB 1..252 1..247 599 47.8 Plus

MIP01391.pep Sequence

Translation from 125 to 868

> MIP01391.pep
MERWHDRVAVVTGASSGIGAAVARHLVSAGVIVVGLARRVDRMKAIKEQL
PPELQGRLHAIHCDVEDLDSVTAAFDWIEEQLGGCDILVNNAGCLNPGQL
LTLELEQLQQVLNVNLMGVVICTRRAFRSMQQREVDGHVILINSLTGRNI
INPPGDELQVLNMYPLTKHGVTAMLEVLRQELRGFKTKIKVTSITPGVTD
TEILPSGYGILPMLKPDDIAAGIMYVLGTPAHVQVHELTIKPLGEPF*

MIP01391.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 16:16:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22157-PA 250 GF22157-PA 1..250 1..247 1078 80.8 Plus
Dana\GF22156-PA 248 GF22156-PA 1..248 1..247 820 62.2 Plus
Dana\GF22361-PA 250 GF22361-PA 1..248 1..245 697 55.2 Plus
Dana\GF10960-PA 252 GF10960-PA 1..252 1..247 629 48.6 Plus
Dana\GF16365-PA 250 GF16365-PA 1..250 1..247 605 47.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 16:16:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17506-PA 247 GG17506-PA 1..247 1..247 1180 95.5 Plus
Dere\GG17505-PA 247 GG17505-PA 1..247 1..247 819 60.5 Plus
Dere\GG18873-PA 250 GG18873-PA 1..248 1..245 705 54.8 Plus
Dere\GG13756-PA 252 GG13756-PA 1..252 1..247 618 46.6 Plus
Dere\GG10137-PA 251 GG10137-PA 1..251 1..247 606 47.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 16:16:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12862-PA 247 GH12862-PA 1..247 1..247 812 59.5 Plus
Dgri\GH12229-PA 250 GH12229-PA 1..250 1..247 718 54.4 Plus
Dgri\GH12228-PA 247 GH12228-PA 1..247 1..247 696 52.6 Plus
Dgri\GH10934-PA 251 GH10934-PA 1..251 1..247 612 46.8 Plus
Dgri\GH18905-PA 250 GH18905-PA 1..250 1..247 597 50.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:35:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG40486-PC 247 CG40486-PC 1..247 1..247 1267 100 Plus
CG40486-PB 247 CG40486-PB 1..247 1..247 1267 100 Plus
CG40485-PC 247 CG40485-PC 1..247 1..247 798 61.1 Plus
CG40485-PB 247 CG40485-PB 1..247 1..247 798 61.1 Plus
antdh-PA 250 CG1386-PA 1..248 1..245 694 54.8 Plus
CG8757-PB 252 CG8757-PB 1..252 1..247 599 47.8 Plus
CG9360-PA 251 CG9360-PA 1..249 1..245 598 49.6 Plus
CG40485-PA 231 CG40485-PA 1..195 1..195 597 58.5 Plus
CG9150-PB 251 CG9150-PB 1..251 1..247 588 47.6 Plus
CG10962-PB 249 CG10962-PB 1..249 1..247 555 46.6 Plus
CG3301-PC 250 CG3301-PC 1..250 1..247 537 47 Plus
CG3301-PB 250 CG3301-PB 1..250 1..247 537 47 Plus
CG3301-PA 250 CG3301-PA 1..250 1..247 537 47 Plus
rdhB-PB 248 CG7077-PB 7..244 4..243 438 36.6 Plus
rdhB-PA 248 CG7077-PA 7..244 4..243 438 36.6 Plus
firl-PE 318 CG14946-PE 57..271 8..224 206 30.5 Plus
firl-PC 318 CG14946-PC 57..271 8..224 206 30.5 Plus
firl-PD 318 CG14946-PD 57..271 8..224 206 30.5 Plus
CG3699-PA 251 CG3699-PA 5..186 6..203 198 30.7 Plus
CG31548-PA 256 CG31548-PA 6..195 7..207 185 28.4 Plus
CG31549-PB 257 CG31549-PB 1..196 1..207 184 28.5 Plus
CG31549-PA 257 CG31549-PA 1..196 1..207 184 28.5 Plus
CG12171-PA 257 CG12171-PA 1..196 1..207 177 27.5 Plus
CG31937-PA 321 CG31937-PA 47..243 7..208 173 27.9 Plus
CG3603-PB 249 CG3603-PB 9..196 7..204 170 30.5 Plus
CG3603-PA 249 CG3603-PA 9..196 7..204 170 30.5 Plus
CG10672-PA 317 CG10672-PA 66..263 1..208 156 24.3 Plus
CG13833-PA 321 CG13833-PA 54..270 8..224 155 26.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 16:17:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14956-PA 247 GI14956-PA 1..247 1..247 965 73.3 Plus
Dmoj\GI14955-PA 247 GI14955-PA 1..247 1..247 827 59.9 Plus
Dmoj\GI15762-PA 250 GI15762-PA 1..248 1..245 707 55.2 Plus
Dmoj\GI13477-PA 251 GI13477-PA 1..251 1..247 620 47.2 Plus
Dmoj\GI10833-PA 250 GI10833-PA 1..250 1..247 603 49.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 16:17:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16539-PA 247 GL16539-PA 1..247 1..247 1062 78.9 Plus
Dper\GL16537-PA 294 GL16537-PA 52..294 1..247 810 64.5 Plus
Dper\GL20303-PA 249 GL20303-PA 1..247 1..245 679 52.6 Plus
Dper\GL27161-PA 250 GL27161-PA 1..250 1..247 600 51.4 Plus
Dper\GL24037-PA 250 GL24037-PA 1..250 1..247 595 48.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 16:17:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23088-PA 247 GA23088-PA 1..247 1..247 1062 78.9 Plus
Dpse\GA23087-PA 294 GA23087-PA 52..294 1..247 805 64.5 Plus
Dpse\GA12578-PA 249 GA12578-PA 1..247 1..245 671 52.2 Plus
Dpse\GA17238-PA 250 GA17238-PA 1..250 1..247 595 51 Plus
Dpse\GA22691-PA 279 GA22691-PA 28..279 1..247 592 45.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 16:17:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10056-PA 247 GM10056-PA 1..247 1..247 1256 96.4 Plus
Dsec\GM11256-PA 250 GM11256-PA 1..248 1..245 705 54.4 Plus
Dsec\GM24579-PA 252 GM24579-PA 1..252 1..247 621 47.4 Plus
Dsec\GM13047-PA 251 GM13047-PA 1..249 1..245 620 50 Plus
Dsec\GM17962-PA 251 GM17962-PA 1..251 1..247 596 47.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 16:17:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23342-PA 247 GD23342-PA 1..247 1..247 819 62.1 Plus
Dsim\GD15999-PA 250 GD15999-PA 1..248 1..245 706 54.8 Plus
Dsim\GD15972-PA 251 GD15972-PA 1..249 1..245 619 50 Plus
Dsim\GD19832-PA 250 GD19832-PA 1..250 1..247 606 49.2 Plus
Dsim\GD22600-PA 251 GD22600-PA 1..251 1..247 601 47.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 16:17:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18924-PA 247 GJ18924-PA 1..247 1..247 964 72.9 Plus
Dvir\GJ18923-PA 247 GJ18923-PA 1..247 1..247 801 58.3 Plus
Dvir\GJ18619-PA 250 GJ18619-PA 1..248 1..245 696 53.6 Plus
Dvir\GJ12118-PA 251 GJ12118-PA 1..251 1..247 605 47.2 Plus
Dvir\GJ14440-PA 250 GJ14440-PA 1..250 1..247 603 47.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 16:17:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20029-PA 264 GK20029-PA 1..242 1..242 956 73.6 Plus
Dwil\GK19844-PA 249 GK19844-PA 1..249 1..247 791 59.6 Plus
Dwil\GK16521-PA 250 GK16521-PA 1..248 1..245 682 50.8 Plus
Dwil\GK15026-PA 253 GK15026-PA 1..253 1..247 633 48 Plus
Dwil\GK12769-PA 250 GK12769-PA 1..250 1..247 616 51.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 16:17:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15260-PA 247 GE15260-PA 1..247 1..247 1262 96.8 Plus
Dyak\GE15259-PA 247 GE15259-PA 1..247 1..247 821 61.3 Plus
Dyak\GE17313-PA 250 GE17313-PA 1..248 1..245 703 54 Plus
Dyak\GE20052-PA 266 GE20052-PA 15..266 1..247 625 47.4 Plus
Dyak\GE18948-PA 251 GE18948-PA 1..251 1..247 604 47.2 Plus