MIP02753.complete Sequence
623 bp assembled on 2009-01-12
GenBank Submission: BT056294.1
> MIP02753.complete
CTCGAATTATTGCTTTAAATTTTGCTAGTAATTGGTCTTAAATTTACAAT
AATGAATAAAGAAGCAACGAAAAGGCGGCGCCAGAGGTGCACCGAATCAC
TCAAGGATATATTGTCAAATCTGCGCATTCGTAACAGAAAGGCCTGGTTC
AATTATGTAGACAAGACTAAATCGCCACATATAAGAAATTTGTTGGCCAA
AGAATCGTATAAAAAATTAAAAAATGCTTCCAAAACTTCAGGTAAGGAAA
AAAGAAAGATTGAAAAATTGCAACGTTCTTTAAAAAAAATGATGAAGCAA
GAGTTACAAAAACAGGTGATTTACCTAAAGAATATTTGGGTGTCCTTAGC
ACATGTCCTTGCACTACTTTTCGATCAAGGACCTATTGAGCAAATCAGCA
GCCTGGTATTCACTATATTCACTATAACTAAATCTTTGGTAGTTGGCATT
AAGTATAAAACCAAAATGGAAGATTTCGCCGAGCATCACAGCGAATGAAG
GCTAATCTGCACATTCTATTCGAAATCAGAAGTTTATATATATATTTGTT
TGTATTTTGTCGTAATAGCTTGCTATGTTTATTATACAAAGAATAAAATA
TTAATAAAAAAAAAAAAAAAAAA
MIP02753.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:18:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MB8.chr2L.pasa.9.a | 767 | MB8.chr2L.pasa.9.a | 149..761 | 3..615 | 3065 | 100 | Plus |
MB8.chr2L.pasa.17.a | 561 | MB8.chr2L.pasa.17.a | 274..561 | 300..587 | 1440 | 100 | Plus |
MB8.chr2L.pasa.17.a | 561 | MB8.chr2L.pasa.17.a | 37..275 | 3..241 | 1195 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:53:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 14007133..14007568 | 170..605 | 2180 | 100 | Plus |
chr2L | 23010047 | chr2L | 14006909..14007075 | 3..169 | 775 | 97.6 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:01:04 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:53:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 14008364..14008809 | 170..615 | 2230 | 100 | Plus |
2L | 23513712 | 2L | 14008140..14008306 | 3..169 | 835 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:36:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 14008364..14008809 | 170..615 | 2230 | 100 | Plus |
2L | 23513712 | 2L | 14008140..14008306 | 3..169 | 835 | 100 | Plus |
Blast to na_te.dros performed 2019-03-15 14:53:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 3862..3935 | 604..533 | 121 | 68 | Minus |
Tabor | 7345 | Tabor TABOR 7345bp | 6756..6802 | 560..514 | 118 | 72.3 | Minus |
Dbuz\BuT5 | 669 | Dbuz\BuT5 BUT5 669bp | 493..557 | 243..178 | 111 | 65.2 | Minus |
MIP02753.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:54:11 Download gff for
MIP02753.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 14006905..14007075 | 1..169 | 96 | -> | Plus |
chr2L | 14007133..14007553 | 170..590 | 100 | -> | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:27:33 Download gff for
MIP02753.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42692-RB | 1..447 | 52..498 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:48:34 Download gff for
MIP02753.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42692-RB | 1..447 | 52..498 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:14:08 Download gff for
MIP02753.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42692-RB | 1..447 | 52..498 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:27:33 Download gff for
MIP02753.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42692-RB | 10..616 | 1..605 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:48:34 Download gff for
MIP02753.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42692-RB | 36..642 | 1..605 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:14:08 Download gff for
MIP02753.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42692-RB | 36..642 | 1..605 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:54:11 Download gff for
MIP02753.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 14008364..14008799 | 170..605 | 100 | | Plus |
2L | 14008136..14008306 | 1..169 | 98 | -> | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:54:11 Download gff for
MIP02753.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 14008364..14008799 | 170..605 | 100 | | Plus |
2L | 14008136..14008306 | 1..169 | 98 | -> | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:54:11 Download gff for
MIP02753.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 14008364..14008799 | 170..605 | 100 | | Plus |
2L | 14008136..14008306 | 1..169 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:48:34 Download gff for
MIP02753.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 14008136..14008306 | 1..169 | 98 | -> | Plus |
arm_2L | 14008364..14008799 | 170..605 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:00:10 Download gff for
MIP02753.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 14008364..14008799 | 170..605 | 100 | | Plus |
2L | 14008136..14008306 | 1..169 | 98 | -> | Plus |
MIP02753.pep Sequence
Translation from 51 to 497
> MIP02753.pep
MNKEATKRRRQRCTESLKDILSNLRIRNRKAWFNYVDKTKSPHIRNLLAK
ESYKKLKNASKTSGKEKRKIEKLQRSLKKMMKQELQKQVIYLKNIWVSLA
HVLALLFDQGPIEQISSLVFTIFTITKSLVVGIKYKTKMEDFAEHHSE*
MIP02753.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:15:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42692-PB | 148 | CG42692-PB | 1..148 | 1..148 | 746 | 100 | Plus |
CG42692-PA | 128 | CG42692-PA | 1..128 | 1..148 | 618 | 86.5 | Plus |
MIP02753.hyp Sequence
Translation from 51 to 497
> MIP02753.hyp
MNKEATKRRRQRCTESLKDILSNLRIRNRKAWFNYVDKTKSPHIRNLLAK
ESYKKLKNASKTSGKEKRKIEKLQRSLKKMMKQELQKQVIYLKNIWVSLA
HVLALLFDQGPIEQISSLVFTIFTITKSLVVGIKYKTKMEDFAEHHSE*
MIP02753.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:05:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42692-PB | 148 | CG42692-PB | 1..148 | 1..148 | 746 | 100 | Plus |
CG42692-PA | 128 | CG42692-PA | 1..128 | 1..148 | 618 | 86.5 | Plus |