Clone MIP02843 Report

Search the DGRC for MIP02843

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:28
Well:43
Vector:pOT2
Associated Gene/Transcriptnemy-RF
Protein status:MIP02843.pep: wuzgold
Sequenced Size:1589

Clone Sequence Records

MIP02843.complete Sequence

1589 bp assembled on 2009-03-05

GenBank Submission: BT071809.1

> MIP02843.complete
ACCAAATCCAAACTAAAAATTCCAGGACAAGTGAACCAGCGCAACTCTAC
GCATTGAAGAAAATTGGATATTTGCTAGGCAAATTAGATAATTGCGATTT
CGCTTAAGTCCACTGTAATCCCACTTGATCCATCTATCCATCTGTTGTCC
ATCAATTAAGCCGATTAGCAGCACATTCAACCCGCAATTAGCGTAATCTC
TTGAGAATCTCTGGTAGAATCTCCATAATTCGAAGGCAGACCCTCGGAAT
CATCATAAATTGTGTTAAATGAGGGCAAACCTACATACCCCAGATTGTAG
TTGCACTTGCGTCTATCCCAAGAAATCAGAATCTGTAAATTTGTTGTATC
CTAAAAATAAATTATATATACTGATTATGGTCTTAAATACAAACACATCA
AAGTATGAAACCCATTGACGGACCCTTTATAGATGAATTGAATCGCATGT
TCTTTCATCGACCCAACTTCATGAAAACTCGGATTAAAAAGTAATTGTTT
CAGTGCTATTTCATATGCTATCATGGATTGTCCTATGCTCCTATCTCGTT
ACAGGCGCTATGAGGAGGATCCAGATAATGCCTGGAATTGCTGCTCCTGG
TGCGAATACTTGCTGATCGTCATCCTGTCCACGATCCTGCTGGTGGGCGT
GCTGGTGCTAACCCTCTTCTGGGTGATGTTCTACCGCGATGGCTTCGCCT
GGTCGGAGAGTCCCAAGCAGCAGTTCAATCTGCATCCCATCCTCATGATT
GCTGGCTTCGTCACGCTCTCCGGATTTTCCATCTTGATCTATCGTCTGTG
CCGCTGCGTGAAGCAAATCTATGTGAAGCTGATCCACATGTTCTTCCACG
CCGTGGCCATTCCGTGCATCGCCCTGGGTTTCATATCCGTCTTCGCTTCC
CACGACGCGTTGCATAAGGTCAACTTCTATAGCCTCCACTCGTGGCTGGG
CTTCGTGACAATGGGCATGTTCGTGCTCCAGTTTGTGATCGGCTTCTTCA
GCTTTCTGGTAATGCTGTGCTGTGAGAACAAGACCTACAGCTGCCGCTCG
GCCATGGTGCCCATCCACGCCAGCTTGGGACTGGCCAACTTCTGGCTGGC
CATTGCCACATCCGTCACGGGACTGATCGAGAAGGAGCGCGAAACCGTCA
ACGAGGCGGGCGTGAGCAGTGAGAACAAGCTGGTGGAGCACTACATCACC
AGTGCCATCGGCGTGACCCTGATCTTCATTGGCATCATCGTCACCTTCGC
GGTGCGGCGTTCCAATGCGCCCGCCTCGGCGAAGGTCTACGTCACGGAGC
GCATTTAGACGGTCCGTCCGGCTCGTCAGAGTCTCCGCCGCCGGAATTGG
TCCACGGCCAGGAGGGTAAGCGAGTCGCAGCAGGTGTACCCGAGGATTCC
GGAACTCGGTGACTTGGACTGGACTTGGGGAAACGGACCGGCGGTGTCCT
TTCGCCAGGCTTAGCGCACAGAGACCACGCTTCTGCAACTCTATCCGAAC
CCTTTGTAACCTTTTATATGCCAAATTAAATCCACATCATACACTTAGAC
TACTCCATATGGCTATAATCAAAAAAAAAAAAAAAAAAA

MIP02843.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:25:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG8776-RF 2055 CG8776-RF 1..1574 1..1574 7870 100 Plus
CG8776.c 1988 CG8776.c 490..1509 555..1574 5100 100 Plus
CG8776.b 1668 CG8776.b 170..1189 555..1574 5100 100 Plus
CG8776.c 1988 CG8776.c 1..490 2..491 2450 100 Plus
CG8776.b 1668 CG8776.b 1..170 322..491 850 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 19:40:00
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 8548228..8549005 778..1 3830 99.5 Minus
chr2R 21145070 chr2R 8547237..8547642 1570..1165 1970 99 Minus
chr2R 21145070 chr2R 8547933..8548155 1001..779 1115 100 Minus
chr2R 21145070 chr2R 8547712..8547885 1166..993 855 99.4 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:01:07 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 19:39:59
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12660973..12661750 778..1 3890 100 Minus
2R 25286936 2R 12659978..12660387 1574..1165 2050 100 Minus
2R 25286936 2R 12660678..12660900 1001..779 1115 100 Minus
2R 25286936 2R 12660457..12660630 1166..993 855 99.4 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:42:41
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 12662172..12662949 778..1 3890 100 Minus
2R 25260384 2R 12661177..12661586 1574..1165 2050 100 Minus
2R 25260384 2R 12661877..12662099 1001..779 1115 100 Minus
2R 25260384 2R 12661656..12661829 1166..993 855 99.4 Minus
Blast to na_te.dros performed on 2019-03-16 19:39:59 has no hits.

MIP02843.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 19:40:42 Download gff for MIP02843.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 8547933..8548155 779..1001 100 <- Minus
chr2R 8547237..8547640 1167..1570 99 <- Minus
chr2R 8547712..8547876 1002..1166 100 <- Minus
chr2R 8548228..8549005 1..778 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:07:05 Download gff for MIP02843.complete
Subject Subject Range Query Range Percent Splice Strand
CG8776-RB 46..804 551..1308 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:38:43 Download gff for MIP02843.complete
Subject Subject Range Query Range Percent Splice Strand
nemy-RF 1..786 523..1308 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:44:47 Download gff for MIP02843.complete
Subject Subject Range Query Range Percent Splice Strand
nemy-RG 46..804 551..1308 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:38:33 Download gff for MIP02843.complete
Subject Subject Range Query Range Percent Splice Strand
nemy-RG 46..804 551..1308 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-03-05 12:08:52 Download gff for MIP02843.complete
Subject Subject Range Query Range Percent Splice Strand
CG8776-RE 822..1842 551..1570 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:38:43 Download gff for MIP02843.complete
Subject Subject Range Query Range Percent Splice Strand
nemy-RF 1..1570 1..1570 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:44:47 Download gff for MIP02843.complete
Subject Subject Range Query Range Percent Splice Strand
nemy-RA 492..1507 555..1570 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:38:33 Download gff for MIP02843.complete
Subject Subject Range Query Range Percent Splice Strand
nemy-RA 494..1509 555..1570 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:40:42 Download gff for MIP02843.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12660678..12660900 779..1001 100 <- Minus
2R 12660973..12661750 1..778 100   Minus
2R 12659982..12660385 1167..1570 100 <- Minus
2R 12660457..12660621 1002..1166 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:40:42 Download gff for MIP02843.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12660678..12660900 779..1001 100 <- Minus
2R 12660973..12661750 1..778 100   Minus
2R 12659982..12660385 1167..1570 100 <- Minus
2R 12660457..12660621 1002..1166 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:40:42 Download gff for MIP02843.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12660678..12660900 779..1001 100 <- Minus
2R 12660973..12661750 1..778 100   Minus
2R 12659982..12660385 1167..1570 100 <- Minus
2R 12660457..12660621 1002..1166 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:44:47 Download gff for MIP02843.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8547487..8547890 1167..1570 100 <- Minus
arm_2R 8547962..8548126 1002..1166 100 <- Minus
arm_2R 8548183..8548405 779..1001 100 <- Minus
arm_2R 8548478..8549255 1..778 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:12:41 Download gff for MIP02843.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12661181..12661584 1167..1570 100 <- Minus
2R 12661656..12661820 1002..1166 100 <- Minus
2R 12661877..12662099 779..1001 100 <- Minus
2R 12662172..12662949 1..778 100   Minus

MIP02843.pep Sequence

Translation from 522 to 1307

> MIP02843.pep
MDCPMLLSRYRRYEEDPDNAWNCCSWCEYLLIVILSTILLVGVLVLTLFW
VMFYRDGFAWSESPKQQFNLHPILMIAGFVTLSGFSILIYRLCRCVKQIY
VKLIHMFFHAVAIPCIALGFISVFASHDALHKVNFYSLHSWLGFVTMGMF
VLQFVIGFFSFLVMLCCENKTYSCRSAMVPIHASLGLANFWLAIATSVTG
LIEKERETVNEAGVSSENKLVEHYITSAIGVTLIFIGIIVTFAVRRSNAP
ASAKVYVTERI*

MIP02843.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:01:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11463-PA 290 GF11463-PA 40..290 11..261 1227 95.6 Plus
Dana\GF24874-PA 336 GF24874-PA 110..274 32..204 285 40 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:01:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22561-PA 290 GG22561-PA 40..290 11..261 1291 96.8 Plus
Dere\GG14525-PA 254 GG14525-PA 33..241 43..250 271 34.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:01:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19961-PA 287 GH19961-PA 37..287 11..261 1216 89.2 Plus
Dgri\GH16482-PA 342 GH16482-PA 121..317 35..242 289 36.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:24:25
Subject Length Description Subject Range Query Range Score Percent Strand
nemy-PA 290 CG8776-PA 40..290 11..261 1310 99.6 Plus
nemy-PB 267 CG8776-PB 18..267 12..261 1308 100 Plus
nemy-PG 267 CG8776-PG 18..267 12..261 1308 100 Plus
nemy-PE 267 CG8776-PE 18..267 12..261 1308 100 Plus
nemy-PL 256 CG8776-PL 7..256 11..261 1294 99.2 Plus
nemy-PK 266 CG8776-PK 18..266 12..261 1292 99.6 Plus
nemy-PC 210 CG8776-PC 1..210 52..261 1085 100 Plus
nemy-PM 209 CG8776-PM 1..209 52..261 1069 99.5 Plus
CG1275-PD 243 CG1275-PD 8..217 29..242 281 33.3 Plus
CG1275-PC 254 CG1275-PC 19..228 29..242 281 33.3 Plus
CG1275-PA 340 CG1275-PA 105..314 29..242 281 33.3 Plus
CG1275-PB 340 CG1275-PB 105..314 29..242 281 33.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:01:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19919-PA 286 GI19919-PA 36..286 11..261 1159 83.3 Plus
Dmoj\GI12153-PA 336 GI12153-PA 116..277 35..204 294 40.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:01:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17735-PA 291 GL17735-PA 41..291 11..261 1219 94.4 Plus
Dper\GL24623-PA 332 GL24623-PA 126..287 35..204 279 40.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:01:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21312-PA 291 GA21312-PA 41..291 11..261 1221 94.8 Plus
Dpse\GA21312-PB 267 GA21312-PB 18..267 12..261 1216 95.2 Plus
Dpse\GA21312-PC 210 GA21312-PC 1..210 52..261 1052 94.3 Plus
Dpse\GA11787-PA 349 GA11787-PA 126..287 35..204 282 40.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:01:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20344-PA 290 GM20344-PA 40..290 11..261 1313 98.8 Plus
Dsec\GM14130-PA 254 GM14130-PA 33..228 43..242 271 35.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:01:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25823-PA 290 GD25823-PA 40..290 11..261 1313 98.8 Plus
Dsim\GD13402-PA 340 GD13402-PA 119..278 43..204 274 39.6 Plus
Dsim\GD13398-PA 243 GD13398-PA 20..217 35..242 272 35.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:01:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15086-PA 287 GJ15086-PA 37..287 11..261 1214 88.8 Plus
Dvir\GJ13433-PA 338 GJ13433-PA 117..313 35..242 298 36.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:01:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21609-PA 289 GK21609-PA 39..289 11..261 1054 87.6 Plus
Dwil\GK12595-PA 355 GK12595-PA 133..295 35..204 260 37.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:01:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13431-PA 290 GE13431-PA 40..290 11..261 1291 96.8 Plus
Dyak\GE21717-PA 254 GE21717-PA 33..241 43..250 274 34.4 Plus

MIP02843.hyp Sequence

Translation from 522 to 1307

> MIP02843.hyp
MDCPMLLSRYRRYEEDPDNAWNCCSWCEYLLIVILSTILLVGVLVLTLFW
VMFYRDGFAWSESPKQQFNLHPILMIAGFVTLSGFSILIYRLCRCVKQIY
VKLIHMFFHAVAIPCIALGFISVFASHDALHKVNFYSLHSWLGFVTMGMF
VLQFVIGFFSFLVMLCCENKTYSCRSAMVPIHASLGLANFWLAIATSVTG
LIEKERETVNEAGVSSENKLVEHYITSAIGVTLIFIGIIVTFAVRRSNAP
ASAKVYVTERI*

MIP02843.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:47:56
Subject Length Description Subject Range Query Range Score Percent Strand
nemy-PA 290 CG8776-PA 40..290 11..261 1310 99.6 Plus
nemy-PB 267 CG8776-PB 18..267 12..261 1308 100 Plus
nemy-PG 267 CG8776-PG 18..267 12..261 1308 100 Plus
nemy-PE 267 CG8776-PE 18..267 12..261 1308 100 Plus
nemy-PL 256 CG8776-PL 7..256 11..261 1294 99.2 Plus