Clone MIP02933 Report

Search the DGRC for MIP02933

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:29
Well:33
Vector:pOT2
Associated Gene/Transcriptbbc-RD
Protein status:MIP02933.pep: wuzgold
Sequenced Size:1566

Clone Sequence Records

MIP02933.complete Sequence

1566 bp assembled on 2009-01-12

GenBank Submission: BT056298.1

> MIP02933.complete
GCCGCCGTAACAAGAACTAAATTTAGAAAGAGACTTTCACTGGGGCTGTG
GAGAAAACCTTGCCTTTCTAATCATATGGCCCAGAAAGCAGCGTATTTCC
ATATTCCCTAATCTTTCAAACTTAGTGATTATAGCCCAAATGGCGTTGAG
GCTCCGCCGCGTTGGACCTGCTTGCTCTGCGCGCTGGGTTTGTTCATCTA
CCAGAGTCTGGACTCCATCGACGGGAAGCAGGCGCGACGCACGAATACCT
CATCGCCGTTGGGCGAACTTTTCGACCATGGCTGTGACTCCATATCGACG
GTGTTTGTGGCCCTCTCGGCGTGCATCTCCTGCCAACTGGGCCACTATCC
CAACTGGCTGTTCTTCCAGTGCTTCTGTGCTATTGCGCTCTTCTACTGCG
CCCACTGGCAGACGTATGTGTCTGGAACGATGCGGTTCGGCAGAATTGAT
GTGACAGAGGCTCAGTTCTCAATTATAGCCATTCATTTGGTTTCGGCTGC
ACTGGGTCCTGAGATCTGGCTCACCAAGATACCAATCGTGGGCCTTTCAT
GGAATTACACAATATTAGTATTTATCACATTCGGTTATACCTTGAATATA
ATCAATTTCCTAAAAATGTTTACTCAAGGCGGCAGTGGCAAAAACGGCTC
CTCAGTTGCTGGCACCAGTGTCCTCTCGCCCAGCATTCCGCTCACGCTGG
TGGTGCTGCCCGCCCTGATGATTGCCCAGAAGTCGCCGCAGAACCTCTTC
ACCGAGCACGCATCGGTGTACATCATGGCGTTCGGCATGGTGGCCGCCAA
GGTCACCAATAAGCTGGTGATCGCTCACATGACCAAGGCGGAGATGGAGT
ATCTGGACTGGTCGCTGCTCGGCCCCTCGCTGCTGTTCCTCAACCAGTAC
TTCAACTGCATCGTGCCAGAGATCTGGCTACTGTGGTTCACGCTCATCTG
GGGCACCCAGGATCTGCTGCGCTACTGCGCCCAGGTGTGCCTCGAGATTT
GCCAGCACCTGCGCATCGATCTCTTCCGGATACCGTACACGCCCAAAGGC
GCGACCCCGCATCCAGCCACCGCATCGGTGAGCAGCCAGAGCAACTTTGG
CAGCAGTGCGGACAAGAACGGTGGCAGCGCGCATCGAAAGTCGAAGAGCA
AACCGCACTAGGCTCCGGTTATGCGCTACATTAATTAGTAATTTTACAAA
TTTACGTCGTTAGAACCGAGGGATACTCGTAGAAGCAGGCGAAGTGGGAG
CGCAATTAATACAAACCAAACCCAACAAAATTCACCGTCGATGTTTTGGC
TAAATAAACATAACCAAAACCACTGAGAAACAACCAAACGAAATGAAACT
AAACAATAAAGCAGATAGTGAAGTTAGCGAAAGGGCGAAGCAAGATGTGG
CTCCTACATTTTAGGATATAGTTTACAACGCGTCGTTGTAGCAAAGAAGG
CAAAGTGGCTAAGGCTGCTGGGAGACAGAACTGTTGCAGTCTCCGGATAT
CAATTATATGGCTAAATATTTAAAGAAAATAAATACCTATATTTTGTAAA
AAAAAAAAAAAAAAAA

MIP02933.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:18:28
Subject Length Description Subject Range Query Range Score Percent Strand
bbc.a 1684 bbc.a 82..1629 1..1548 7740 100 Plus
bbc.e 2179 bbc.e 82..1629 1..1548 7740 100 Plus
bbc.d 1544 bbc.d 70..1489 129..1548 7100 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:51:28
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 9374489..9375217 1547..819 3645 100 Minus
chr2R 21145070 chr2R 9378962..9379202 369..129 1205 100 Minus
chr2R 21145070 chr2R 9378742..9378908 528..362 820 99.4 Minus
chr2R 21145070 chr2R 9375281..9375439 819..661 795 100 Minus
chr2R 21145070 chr2R 9377048..9377182 661..527 675 100 Minus
chr2R 21145070 chr2R 9380384..9380511 128..1 640 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:01:17 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:51:26
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13487181..13487910 1548..819 3650 100 Minus
2R 25286936 2R 13491655..13491895 369..129 1205 100 Minus
2R 25286936 2R 13491435..13491601 528..362 820 99.4 Minus
2R 25286936 2R 13487974..13488132 819..661 795 100 Minus
2R 25286936 2R 13489741..13489875 661..527 675 100 Minus
2R 25286936 2R 13493077..13493204 128..1 640 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:36:06
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 13488380..13489109 1548..819 3650 100 Minus
2R 25260384 2R 13492854..13493094 369..129 1205 100 Minus
2R 25260384 2R 13492634..13492800 528..362 820 99.4 Minus
2R 25260384 2R 13489173..13489331 819..661 795 100 Minus
2R 25260384 2R 13490940..13491074 661..527 675 100 Minus
2R 25260384 2R 13494276..13494403 128..1 640 100 Minus
Blast to na_te.dros performed 2019-03-15 20:51:27
Subject Length Description Subject Range Query Range Score Percent Strand
17.6 7439 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). 4523..4580 1259..1316 118 71.2 Plus
accord 7404 accord ACCORD 7404bp 979..1108 1253..1376 115 60.4 Plus

MIP02933.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:52:21 Download gff for MIP02933.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 9375281..9375439 661..819 100 <- Minus
chr2R 9377049..9377180 529..660 100 <- Minus
chr2R 9378742..9378900 370..528 100 <- Minus
chr2R 9374489..9375216 820..1547 100 <- Minus
chr2R 9378962..9379202 129..369 100 <- Minus
chr2R 9380384..9380511 1..128 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:50:31 Download gff for MIP02933.complete
Subject Subject Range Query Range Percent Splice Strand
CG6016-RA 220..1254 126..1161 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:27:35 Download gff for MIP02933.complete
Subject Subject Range Query Range Percent Splice Strand
bbc-RA 220..1254 126..1161 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:26:53 Download gff for MIP02933.complete
Subject Subject Range Query Range Percent Splice Strand
bbc-RA 220..1254 126..1161 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:33:34 Download gff for MIP02933.complete
Subject Subject Range Query Range Percent Splice Strand
bbc-RA 220..1254 126..1161 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-01-12 18:21:21 Download gff for MIP02933.complete
Subject Subject Range Query Range Percent Splice Strand
CG6016-RA 618..2038 126..1547 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:27:35 Download gff for MIP02933.complete
Subject Subject Range Query Range Percent Splice Strand
bbc-RA 618..2038 126..1547 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:26:53 Download gff for MIP02933.complete
Subject Subject Range Query Range Percent Splice Strand
bbc-RD 82..1628 1..1547 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:33:34 Download gff for MIP02933.complete
Subject Subject Range Query Range Percent Splice Strand
bbc-RA 611..2031 126..1547 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:52:21 Download gff for MIP02933.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13487182..13487909 820..1547 100 <- Minus
2R 13487974..13488132 661..819 100 <- Minus
2R 13489742..13489873 529..660 100 <- Minus
2R 13491435..13491593 370..528 100 <- Minus
2R 13491655..13491895 129..369 100 <- Minus
2R 13493077..13493204 1..128 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:52:21 Download gff for MIP02933.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13487182..13487909 820..1547 100 <- Minus
2R 13487974..13488132 661..819 100 <- Minus
2R 13489742..13489873 529..660 100 <- Minus
2R 13491435..13491593 370..528 100 <- Minus
2R 13491655..13491895 129..369 100 <- Minus
2R 13493077..13493204 1..128 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:52:21 Download gff for MIP02933.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13487182..13487909 820..1547 100 <- Minus
2R 13487974..13488132 661..819 100 <- Minus
2R 13489742..13489873 529..660 100 <- Minus
2R 13491435..13491593 370..528 100 <- Minus
2R 13491655..13491895 129..369 100 <- Minus
2R 13493077..13493204 1..128 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:26:53 Download gff for MIP02933.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9379160..9379400 129..369 100 <- Minus
arm_2R 9380582..9380709 1..128 100   Minus
arm_2R 9374687..9375414 820..1547 100 <- Minus
arm_2R 9375479..9375637 661..819 100 <- Minus
arm_2R 9377247..9377378 529..660 100 <- Minus
arm_2R 9378940..9379098 370..528 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:00:13 Download gff for MIP02933.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13488381..13489108 820..1547 100 <- Minus
2R 13489173..13489331 661..819 100 <- Minus
2R 13490941..13491072 529..660 100 <- Minus
2R 13492634..13492792 370..528 100 <- Minus
2R 13492854..13493094 129..369 100 <- Minus
2R 13494276..13494403 1..128 100   Minus

MIP02933.pep Sequence

Translation from 429 to 1160

> MIP02933.pep
MRFGRIDVTEAQFSIIAIHLVSAALGPEIWLTKIPIVGLSWNYTILVFIT
FGYTLNIINFLKMFTQGGSGKNGSSVAGTSVLSPSIPLTLVVLPALMIAQ
KSPQNLFTEHASVYIMAFGMVAAKVTNKLVIAHMTKAEMEYLDWSLLGPS
LLFLNQYFNCIVPEIWLLWFTLIWGTQDLLRYCAQVCLEICQHLRIDLFR
IPYTPKGATPHPATASVSSQSNFGSSADKNGGSAHRKSKSKPH*

MIP02933.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:14:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11181-PA 506 GF11181-PA 173..506 1..243 1118 69.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:14:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22487-PA 464 GG22487-PA 175..464 1..243 1184 81 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:14:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22625-PA 455 GH22625-PA 175..455 1..243 1061 74.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:10:11
Subject Length Description Subject Range Query Range Score Percent Strand
bbc-PA 417 CG6016-PA 175..417 1..243 1267 100 Plus
bbc-PC 417 CG6016-PC 175..417 1..243 1080 86.9 Plus
bbc-PB 417 CG6016-PB 175..417 1..243 1079 87.7 Plus
bbc-PE 373 CG6016-PE 175..373 1..243 984 81.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:14:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21334-PA 443 GI21334-PA 175..443 1..243 926 67.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:14:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17070-PA 505 GL17070-PA 175..505 1..243 1093 67.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:14:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19298-PA 461 GA19298-PA 175..461 1..243 1146 78 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:14:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20274-PA 505 GM20274-PA 175..505 1..243 1162 72.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:14:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25756-PA 505 GD25756-PA 175..505 1..243 1174 73.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:14:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19680-PA 455 GJ19680-PA 175..455 1..243 1062 74.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:14:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10662-PA 462 GK10662-PA 175..460 1..242 1133 76.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:14:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13358-PA 508 GE13358-PA 175..508 1..243 1139 71.3 Plus

MIP02933.hyp Sequence

Translation from 429 to 1160

> MIP02933.hyp
MRFGRIDVTEAQFSIIAIHLVSAALGPEIWLTKIPIVGLSWNYTILVFIT
FGYTLNIINFLKMFTQGGSGKNGSSVAGTSVLSPSIPLTLVVLPALMIAQ
KSPQNLFTEHASVYIMAFGMVAAKVTNKLVIAHMTKAEMEYLDWSLLGPS
LLFLNQYFNCIVPEIWLLWFTLIWGTQDLLRYCAQVCLEICQHLRIDLFR
IPYTPKGATPHPATASVSSQSNFGSSADKNGGSAHRKSKSKPH*

MIP02933.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:22:41
Subject Length Description Subject Range Query Range Score Percent Strand
bbc-PA 417 CG6016-PA 175..417 1..243 1267 100 Plus
bbc-PC 417 CG6016-PC 175..417 1..243 1080 86.9 Plus
bbc-PB 417 CG6016-PB 175..417 1..243 1079 87.7 Plus
bbc-PE 373 CG6016-PE 175..373 1..243 984 81.9 Plus