Clone MIP02960 Report

Search the DGRC for MIP02960

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:29
Well:60
Vector:pOT2
Associated Gene/TranscriptRhoGAP1A-RC
Protein status:MIP02960.pep: gold
Sequenced Size:4278

Clone Sequence Records

MIP02960.complete Sequence

4278 bp assembled on 2009-04-07

GenBank Submission: BT081989.1

> MIP02960.complete
GACGAATGGACGTATACGAATACGCGTCATTCATACATAAATAATATACA
TAAAATTTAAAAATATCTGTAAATATAGTTAAAAAGTTCCATTTATATAT
GTGTTACGGATAACCGCCTGTTTAATAGCCTAATTTGAAAAAACATAAAA
GCTACAATAACAAGGCATTACGTAAACTATTAAAATTTTTTGTACGTTCA
AGAGCTAAGTACCGAGCTTTTTTTTCATTTCCGCGCAAGTGTTTGTTAAC
GTGTTTTCGCTTGAATCAAAACCTATCTCCCAGTCATAGACACTTCGTCT
TTGTTAACCCCTAATTTCCCATTCAATTCAATCAATTTTTATACCATATC
AAAGGAAAAATAGCTCAACAAAGTGGCGCTGAATTTTAAGCATGGCTTCC
TTTAAGGAGAAGTTTAAATTATGGTCCAGAGGGGTGCGTAAGAGTAATTT
GTTGAGAACGAGATCTCTACTGCAGATATTATATATACAACATAACGAAC
TTAAAAATGGAAAACGCTACATAAGCTACAACAATTTTAGCTGTATTATG
ACAAGTTGAAATCAATAAAATACTTATCGCAAAATTCTATATAACTACGC
GCATACACGTAGAATCCGTGCCTATATCGTTAGGTCTCTTTTATCTATAA
GTGTATATACTATCTTGAAACCAAAGAATTAAGAAATACCACCAAAAAAA
CGGAGCTTCCAATTTTCTCTACAGCTCTAGCTGTCGACCTTTTTGGGCTT
TAAATTGCACGCTTTCTTCATTTCTCCGCTCTCATTTAACCAACCACCCA
CTTGGATATGGATATCCACCTCGATAAGCAAACAATTTTTGGTTGGACAT
TTTTCACTTCTTGAAATCTAGTTTAAATCTGCGCGAGTCTCCTTCTTCCA
CTGGCGCCAAGGACAAGGATCGCCTGTCGCTCAACCCAGACAACAAATAC
ACAACACACACAAATGCCGTTATAGGTGGGATCGGATCGGAAAAGGTGAG
CGGTCCACTTCACTCCACTCAGATCACGGCGGACGGCAAACGAACAGGGG
AGCTGTATTTAAAGCGGGAAGAAGACAAATGCAAGGATAGTAATAGTGAG
GACACCGATGGGGCCCTGCAGCAGTGCATCACGGAATTGGCGGCGTCTTT
AAAAGCCCAGCCGGATAACGTGGCAGGAGGGCGTCTAGAAAACGATGTCG
ATATCGATAAACCGCTGCGCAAGTCGACGTCACAATACGTTACTGTCATT
CAGGTCAAAGAGGCCAAAGACAAAGAAAGCGCTGATGGAACTACCTCGTC
ATCGGGGATCGGTGAACCGCAGCAGCAACCCACTCCACCATCCACATTTT
CTCGATATTCGGAGGCCACCGCTCCACCGCTTTCGCCATCGCTCACATCG
TACGCTGCCCACGTAGAGGCCAAGAAGAAAATGCCACCCAGACCTCCGCC
AAAGAATATTCGGCGAGTTGAGCCCCCTACCATTCCCAGCCAGCAGCTAT
CGTCTTCGCCCAAAAGGGAGACATATATGATCAACACGATGCCAAGCAGT
TCAAGCGGCAGTCTCTGCATTGACAGCCTGGGCAATTCGCTGGAGCGGAA
CATCAAGCCGTCTGATATACTACGTCAGAAATCATCTGATAATTTGGATT
CCAAGTACTCGGCAAAACGGAAAACCACACCGGAGCTTAGTAAATTTGTG
AACGTAAACAATCCTGAATTAATGGAGGAGCTCGGTCGTAAGATGGTAAG
CAAGGCAGACAGCCTGGAACAAACGAGGAGGAACGACTCGTCGCCTTCTG
GCTGTGGTAGCCTAGGACGCACTTCCTCCACGCCTGGGCGATCGTTGACT
CCTGGACGAACCGGAGTTGGTGCCTCGCCAACTGGTAGTCTAAGTAAAAC
CGGAAAACTGGCAATGGCGGACAGCAGCTCCACTAGCAGTCTAGAGAGGA
GATCGTGCCTGCAGGCTGTCGATGCGGACATTGGAACGGAATCGCGGGAA
TCGGGTGCCAACCAGCGTAGTGTAGGGTCCAAGGAGTCGCTGACATCACA
AGGCATATCGGAGGTGATCAAGAGCTACGAAAGCGTGTCTTCGCTAAGTT
CGGAAAGTGCAAAGGCGGTGGCTTCCCAACAGTCGGCGGCAGCGGGCGGA
GCTTTAGCGGAGTGTGAACCGTACTATGATAGCGTACCGCTCGACAACGG
CGACGGAGAATACGTTTTTATTAAGCCCGGCCGCACCGGATCCTCATCCA
GTCGCGATGATTTGTCGACGCCTGGGAGCAGCATTTTGCCTTTGCCTAAT
GTAGCGGATCCCGAATCTCCAGGCAGGACCTCTAACTACGTCAACATCGA
TTTCTTCCTTCAGCAAGGAATTGAGACGCGCTCCAGTTCGCTAGACAGTG
ACGGGGAGTACGAGGGTCCGCCCATATTACGCACCATTTCGCACGACGAT
CAAACCACAACACAAACTACTCCGGGAGCAATTCGCAAGGTTTGTGGAAA
TGCGCGCGGTGCTAAAATACGTTCCATACTTAGCTCAATTATTCAAAGTG
AGACTATCTACGTGGAATGCCTCAATAAAATGATGCAGTACAAGAAGGCC
ATCCACGCAACCCTAACTACTTCGCAGCCTGTGATCAGGGAGGAGGAGGA
GAACACAATTTTCTTTAAAATTGATGAGCTTTACGATCTGCATACCGGTT
TCTTATCTGATTTAAAGACTATTGTGTCTCACGAGGGTGGTGATGTGCTG
ATCGGTGAGCCGTTTCGTCGACTGGCGGAGATGTTTGACTTATACAGTGC
CTTTTTGCACAACTACAAAAATGCTATTGAGACTGTGAAGAAGTGCAGTG
CCAATAACCCCCAGTTTAAAAAGATCGTCTCCACCATTGTGCTTAATCTG
CAGACGGAACAATCGCTAACTCTCGAGGATCTATTGCACAAACCTGTTGC
GAGGGTACAAATCAACGCATTGGTCTTCAACGATTTGCTACGCGAAACCC
CAAATGCGCATCCGGATCACCAGCCATTAAGGCAGGCGCAAAAGATTATT
CAGATGTTCCTCAATCAGTTCAATGTGGTCAATCAGCGGTTGCCCATTGA
ATCGAATCGAAATTTAAGACGCATGGTGCGTAATTCTTTTATTGTAGAAC
TTGTCGATGGACATCGTAAGCTGCGGCATCTCTTTCTTTTTAATGATGTC
ATCGCATGTGCCAAATACAAAGCATTAGGCCGCGATCGTATCGACTATGA
GCTCAAATGGTTCATTCCGCTAAAAGACGTATCCATTTACGAGGAAGCAG
ATCCGGCGGTCGAGCTTAAGGAATCTAGTCCAGCAAACATTTCGCAAGTA
AAACGCAATTTGCGATCCGTTCGAGATCAATTGGCCATGGAGGTGGCTAA
CAGTGGAAGTGGAGCCTTCCGTTCCGGTGATAAGTATCGCCGCAAGCTGG
CGGATCTGGAATCACAGCTGGTGCTGGCAACGCCCAATTTAGTGTTGCGC
CTGGGGAACAAGGCAAATAATAAAACCATAACCTTCTTTCTTAGCTCGGA
TTTTGAGAGGACGCAGTGGATCGACTCAATCTTATCCCTTAAGCAAAAAT
GCAACCTGCCTGGAGCAAATACTATTAATTCCCTGGAGGTTACCGCCTTC
ATTGTAGCCATGCAGAAGGGCATGAAAACCGAAATGGGTTCATATCTTAT
GCGTAACACTAACGACGAGAGCCTGTTGGTTGGGGACCTGTACATGGGAG
TTCATGGATTGGAAGGACTGGAGCAAGCGAACGACCTGTACATCTGCGTC
GAGGTGGACTCCTATGGCCACTATTTTCGCAAGGCCACCACCAAGAAGAT
ATGTCGCAGTCAAACGCCGCTCTGGAACGAAAGCTTTATGCTGGAACTGG
AGGGCAGCCAGAATGTACGCATTCTTCTTTATGAGGCTAAGGAGCGACCG
CTTCTTAAAGCCAAGCACATACTTAAGTTGAGTTTAAGTTGGCTGACAGA
AACAACGCAGCCGAAGTCAATTAAACTTACTGAGACCTTAGAGCTCGGCT
GTAGCTTCCGTTTTATACCAGGCGAGCTCTTCCGCGGCAGCACAAAGCCA
GGAGCCCTCTTCGGTGCCAAAATGAGTCAAGTATTAAAGTAAATAATAAT
TCCATATATCAAATAACAGCACCCCTTTTCGTGAAATGAAAATTGTAAAG
AAATAATTAAATATTTTAATAAACTTTGTGAGCAATATAAATTAATGTAA
AACTAAAAAAAAAAAAAAAAAAAAAAAA

MIP02960.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:29:31
Subject Length Description Subject Range Query Range Score Percent Strand
RhoGAP1A-RC 4475 RhoGAP1A-RC 69..4323 1..4255 21275 100 Plus
RhoGAP1A.h 4368 RhoGAP1A.h 69..4198 1..4130 20650 100 Plus
RhoGAP1A.g 4363 RhoGAP1A.g 69..4193 1..4125 20625 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:33:08
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 33634..34644 2583..3593 5040 99.9 Plus
chrX 22417052 chrX 27419..28281 1..863 4300 99.9 Plus
chrX 22417052 chrX 29884..30511 1439..2066 3140 100 Plus
chrX 22417052 chrX 29190..29768 863..1441 2895 100 Plus
chrX 22417052 chrX 34704..35089 3592..3977 1930 100 Plus
chrX 22417052 chrX 30652..30949 2066..2363 1475 99.7 Plus
chrX 22417052 chrX 35152..35430 3976..4254 1395 100 Plus
chrX 22417052 chrX 31018..31146 2363..2491 645 100 Plus
chrX 22417052 chrX 33017..33117 2488..2588 505 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:01:20 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:33:05
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 137250..138260 2583..3593 5055 100 Plus
X 23542271 X 131035..131897 1..863 4315 100 Plus
X 23542271 X 133500..134127 1439..2066 3140 100 Plus
X 23542271 X 132806..133384 863..1441 2895 100 Plus
X 23542271 X 138320..138705 3592..3977 1930 100 Plus
X 23542271 X 134268..134565 2066..2363 1490 100 Plus
X 23542271 X 138768..139047 3976..4255 1400 100 Plus
X 23542271 X 134634..134762 2363..2491 645 100 Plus
X 23542271 X 136633..136733 2488..2588 505 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:46:09
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 145348..146358 2583..3593 5055 100 Plus
X 23527363 X 139133..139995 1..863 4315 100 Plus
X 23527363 X 141598..142225 1439..2066 3140 100 Plus
X 23527363 X 140904..141482 863..1441 2895 100 Plus
X 23527363 X 146418..146803 3592..3977 1930 100 Plus
X 23527363 X 142366..142663 2066..2363 1490 100 Plus
X 23527363 X 146866..147145 3976..4255 1400 100 Plus
X 23527363 X 142732..142860 2363..2491 645 100 Plus
X 23527363 X 144731..144831 2488..2588 505 100 Plus
Blast to na_te.dros performed 2019-03-16 17:33:06
Subject Length Description Subject Range Query Range Score Percent Strand
Tabor 7345 Tabor TABOR 7345bp 6526..6667 33..176 121 54.9 Plus
Quasimodo 7387 Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. 6396..6500 4139..4246 118 60.6 Plus

MIP02960.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:33:53 Download gff for MIP02960.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 27419..28281 1..863 99 -> Plus
chrX 29191..29768 864..1441 100 -> Plus
chrX 29887..30511 1442..2066 100 -> Plus
chrX 30653..30948 2067..2362 99 -> Plus
chrX 31018..31144 2363..2489 100 -> Plus
chrX 33019..33117 2490..2588 100 -> Plus
chrX 33640..34644 2589..3593 99 -> Plus
chrX 34706..35089 3594..3977 100 -> Plus
chrX 35154..35430 3978..4254 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:08:53 Download gff for MIP02960.complete
Subject Subject Range Query Range Percent Splice Strand
RhoGAP1A-RB 333..1964 858..2489 99 <- Plus
RhoGAP1A-RB 1982..3641 2490..4146 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:44:11 Download gff for MIP02960.complete
Subject Subject Range Query Range Percent Splice Strand
RhoGAP1A-RC 1..2712 1431..4142 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:35:19 Download gff for MIP02960.complete
Subject Subject Range Query Range Percent Splice Strand
RhoGAP1A-RA 333..1964 858..2489 99 <- Plus
RhoGAP1A-RA 1982..3641 2490..4146 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:01:31 Download gff for MIP02960.complete
Subject Subject Range Query Range Percent Splice Strand
RhoGAP1A-RA 333..1964 858..2489 99 <- Plus
RhoGAP1A-RA 1982..3641 2490..4146 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-04-07 13:14:10 Download gff for MIP02960.complete
Subject Subject Range Query Range Percent Splice Strand
RhoGAP1A-RB 599..2230 858..2489 99 <- Plus
RhoGAP1A-RB 2248..3907 2490..4146 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:44:10 Download gff for MIP02960.complete
Subject Subject Range Query Range Percent Splice Strand
RhoGAP1A-RC 1..4254 1..4254 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:35:19 Download gff for MIP02960.complete
Subject Subject Range Query Range Percent Splice Strand
RhoGAP1A-RC 1..4254 1..4254 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:01:31 Download gff for MIP02960.complete
Subject Subject Range Query Range Percent Splice Strand
RhoGAP1A-RC 1..4254 1..4254 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:33:53 Download gff for MIP02960.complete
Subject Subject Range Query Range Percent Splice Strand
X 131035..131897 1..863 100 -> Plus
X 132807..133384 864..1441 100 -> Plus
X 133503..134127 1442..2066 100 -> Plus
X 134269..134564 2067..2362 100 -> Plus
X 134634..134760 2363..2489 100 -> Plus
X 136635..136733 2490..2588 100 -> Plus
X 137256..138260 2589..3593 100 -> Plus
X 138322..138705 3594..3977 100 -> Plus
X 138770..139046 3978..4254 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:33:53 Download gff for MIP02960.complete
Subject Subject Range Query Range Percent Splice Strand
X 131035..131897 1..863 100 -> Plus
X 132807..133384 864..1441 100 -> Plus
X 133503..134127 1442..2066 100 -> Plus
X 134269..134564 2067..2362 100 -> Plus
X 134634..134760 2363..2489 100 -> Plus
X 136635..136733 2490..2588 100 -> Plus
X 137256..138260 2589..3593 100 -> Plus
X 138322..138705 3594..3977 100 -> Plus
X 138770..139046 3978..4254 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:33:53 Download gff for MIP02960.complete
Subject Subject Range Query Range Percent Splice Strand
X 131035..131897 1..863 100 -> Plus
X 132807..133384 864..1441 100 -> Plus
X 133503..134127 1442..2066 100 -> Plus
X 134269..134564 2067..2362 100 -> Plus
X 134634..134760 2363..2489 100 -> Plus
X 136635..136733 2490..2588 100 -> Plus
X 137256..138260 2589..3593 100 -> Plus
X 138322..138705 3594..3977 100 -> Plus
X 138770..139046 3978..4254 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:35:19 Download gff for MIP02960.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 27422..28284 1..863 100 -> Plus
arm_X 29194..29771 864..1441 100 -> Plus
arm_X 29890..30514 1442..2066 100 -> Plus
arm_X 30656..30951 2067..2362 100 -> Plus
arm_X 31021..31147 2363..2489 100 -> Plus
arm_X 33022..33120 2490..2588 100 -> Plus
arm_X 33643..34647 2589..3593 100 -> Plus
arm_X 34709..35092 3594..3977 100 -> Plus
arm_X 35157..35433 3978..4254 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:19:16 Download gff for MIP02960.complete
Subject Subject Range Query Range Percent Splice Strand
X 142732..142858 2363..2489 100 -> Plus
X 144733..144831 2490..2588 100 -> Plus
X 139133..139995 1..863 100 -> Plus
X 140905..141482 864..1441 100 -> Plus
X 141601..142225 1442..2066 100 -> Plus
X 142367..142662 2067..2362 100 -> Plus
X 145354..146358 2589..3593 100 -> Plus
X 146420..146803 3594..3977 100 -> Plus
X 146868..147144 3978..4254 100   Plus

MIP02960.pep Sequence

Translation from 1430 to 4141

> MIP02960.pep
MPPRPPPKNIRRVEPPTIPSQQLSSSPKRETYMINTMPSSSSGSLCIDSL
GNSLERNIKPSDILRQKSSDNLDSKYSAKRKTTPELSKFVNVNNPELMEE
LGRKMVSKADSLEQTRRNDSSPSGCGSLGRTSSTPGRSLTPGRTGVGASP
TGSLSKTGKLAMADSSSTSSLERRSCLQAVDADIGTESRESGANQRSVGS
KESLTSQGISEVIKSYESVSSLSSESAKAVASQQSAAAGGALAECEPYYD
SVPLDNGDGEYVFIKPGRTGSSSSRDDLSTPGSSILPLPNVADPESPGRT
SNYVNIDFFLQQGIETRSSSLDSDGEYEGPPILRTISHDDQTTTQTTPGA
IRKVCGNARGAKIRSILSSIIQSETIYVECLNKMMQYKKAIHATLTTSQP
VIREEEENTIFFKIDELYDLHTGFLSDLKTIVSHEGGDVLIGEPFRRLAE
MFDLYSAFLHNYKNAIETVKKCSANNPQFKKIVSTIVLNLQTEQSLTLED
LLHKPVARVQINALVFNDLLRETPNAHPDHQPLRQAQKIIQMFLNQFNVV
NQRLPIESNRNLRRMVRNSFIVELVDGHRKLRHLFLFNDVIACAKYKALG
RDRIDYELKWFIPLKDVSIYEEADPAVELKESSPANISQVKRNLRSVRDQ
LAMEVANSGSGAFRSGDKYRRKLADLESQLVLATPNLVLRLGNKANNKTI
TFFLSSDFERTQWIDSILSLKQKCNLPGANTINSLEVTAFIVAMQKGMKT
EMGSYLMRNTNDESLLVGDLYMGVHGLEGLEQANDLYICVEVDSYGHYFR
KATTKKICRSQTPLWNESFMLELEGSQNVRILLYEAKERPLLKAKHILKL
SLSWLTETTQPKSIKLTETLELGCSFRFIPGELFRGSTKPGALFGAKMSQ
VLK*

MIP02960.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 16:20:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18172-PA 1126 GF18172-PA 162..620 356..773 203 22.8 Plus
Dana\GF22612-PA 1475 GF22612-PA 186..489 362..626 158 24.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 16:20:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\EG:23E12.2-PA 1405 GG12772-PA 310..1213 9..903 4376 94 Plus
Dere\GG16755-PA 1101 GG16755-PA 146..604 356..773 214 23.1 Plus
Dere\GG18180-PA 1702 GG18180-PA 418..722 362..627 159 24.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 16:20:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12683-PA 1484 GH12683-PA 386..1292 9..903 3658 79.7 Plus
Dgri\GH15838-PA 1073 GH15838-PA 139..587 366..773 199 22.6 Plus
Dgri\GH12011-PA 1866 GH12011-PA 432..732 362..627 166 25.2 Plus
Dgri\GH16512-PA 1351 GH16512-PA 895..1142 373..600 161 23.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:38:31
Subject Length Description Subject Range Query Range Score Percent Strand
RhoGAP1A-PC 903 CG40494-PC 1..903 1..903 4588 100 Plus
RhoGAP1A-PF 903 CG40494-PF 1..903 1..903 4588 100 Plus
RhoGAP1A-PB 1403 CG00000-PB 302..1211 1..903 4570 99.2 Plus
RhoGAP1A-PA 1403 CG00000-PA 302..1211 1..903 4570 99.2 Plus
RhoGAP1A-PE 1404 CG40494-PE 302..1212 1..903 4558 99.1 Plus
RhoGAP1A-PD 1402 CG40494-PD 302..1210 1..903 4554 99.1 Plus
CG43102-PE 1101 CG43102-PE 148..606 356..773 215 22.8 Plus
CG43102-PD 1542 CG43102-PD 599..1047 366..773 214 22.9 Plus
CG43102-PG 1875 CG43102-PG 932..1380 366..773 214 22.9 Plus
CG43102-PB 2448 CG43102-PB 1505..1953 366..773 214 22.9 Plus
CG43102-PA 2448 CG43102-PA 1505..1953 366..773 214 22.9 Plus
CG43102-PF 2468 CG43102-PF 1505..1953 366..773 214 22.9 Plus
CG43102-PC 2519 CG43102-PC 1576..2024 366..773 214 22.9 Plus
CG43658-PD 1736 CG43658-PD 251..756 143..626 173 21.8 Plus
CG43658-PC 2263 CG43658-PC 778..1283 143..626 173 21.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 16:20:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16354-PA 1054 GI16354-PA 344..1032 9..721 2505 73 Plus
Dmoj\GI23633-PA 1059 GI23633-PA 131..382 366..597 198 26.3 Plus
Dmoj\GI12189-PA 1294 GI12189-PA 838..1085 373..600 166 23.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 16:20:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16641-PA 612 GL16641-PA 324..593 92..357 869 72.5 Plus
Dper\GL12238-PA 1112 GL12238-PA 142..403 356..597 198 25.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 16:20:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22873-PA 1409 GA22873-PA 321..1218 9..903 3742 81.5 Plus
Dpse\GA30221-PC 2405 GA30221-PC 1445..1893 366..773 208 21.8 Plus
Dpse\GA30221-PB 2461 GA30221-PB 1501..1949 366..773 208 21.8 Plus
Dpse\GA30221-PD 1543 GA30221-PD 583..1031 366..773 204 21.8 Plus
Dpse\GA30221-PE 1112 GA30221-PE 142..403 356..597 198 25.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 16:20:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11115-PA 1408 GM11115-PA 304..1216 1..903 4657 96.3 Plus
Dsec\GM15343-PA 1101 GM15343-PA 148..409 356..597 205 26.5 Plus
Dsec\GM13312-PA 1738 GM13312-PA 455..759 362..627 159 24.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 16:20:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\RhoGAP1A-PA 1221 GD16492-PA 311..1160 9..903 3995 91.6 Plus
Dsim\GD20215-PA 984 GD20215-PA 148..409 356..597 205 26.5 Plus
Dsim\GD17354-PA 1731 GD17354-PA 448..752 362..627 159 24.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 16:20:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16725-PA 1451 GJ16725-PA 361..1259 9..903 3599 79.3 Plus
Dvir\GJ24709-PA 1057 GJ24709-PA 127..378 366..597 195 26 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 16:20:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17679-PA 1424 GK17679-PA 321..1232 10..903 3522 77.9 Plus
Dwil\GK22503-PA 1099 GK22503-PA 110..585 339..773 205 21.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 16:20:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\EG:23E12.2-PA 1404 GE16598-PA 309..1212 9..903 4356 94.6 Plus
Dyak\GE25250-PA 1103 GE25250-PA 148..606 356..773 202 22.6 Plus

MIP02960.hyp Sequence

Translation from 1430 to 4141

> MIP02960.hyp
MPPRPPPKNIRRVEPPTIPSQQLSSSPKRETYMINTMPSSSSGSLCIDSL
GNSLERNIKPSDILRQKSSDNLDSKYSAKRKTTPELSKFVNVNNPELMEE
LGRKMVSKADSLEQTRRNDSSPSGCGSLGRTSSTPGRSLTPGRTGVGASP
TGSLSKTGKLAMADSSSTSSLERRSCLQAVDADIGTESRESGANQRSVGS
KESLTSQGISEVIKSYESVSSLSSESAKAVASQQSAAAGGALAECEPYYD
SVPLDNGDGEYVFIKPGRTGSSSSRDDLSTPGSSILPLPNVADPESPGRT
SNYVNIDFFLQQGIETRSSSLDSDGEYEGPPILRTISHDDQTTTQTTPGA
IRKVCGNARGAKIRSILSSIIQSETIYVECLNKMMQYKKAIHATLTTSQP
VIREEEENTIFFKIDELYDLHTGFLSDLKTIVSHEGGDVLIGEPFRRLAE
MFDLYSAFLHNYKNAIETVKKCSANNPQFKKIVSTIVLNLQTEQSLTLED
LLHKPVARVQINALVFNDLLRETPNAHPDHQPLRQAQKIIQMFLNQFNVV
NQRLPIESNRNLRRMVRNSFIVELVDGHRKLRHLFLFNDVIACAKYKALG
RDRIDYELKWFIPLKDVSIYEEADPAVELKESSPANISQVKRNLRSVRDQ
LAMEVANSGSGAFRSGDKYRRKLADLESQLVLATPNLVLRLGNKANNKTI
TFFLSSDFERTQWIDSILSLKQKCNLPGANTINSLEVTAFIVAMQKGMKT
EMGSYLMRNTNDESLLVGDLYMGVHGLEGLEQANDLYICVEVDSYGHYFR
KATTKKICRSQTPLWNESFMLELEGSQNVRILLYEAKERPLLKAKHILKL
SLSWLTETTQPKSIKLTETLELGCSFRFIPGELFRGSTKPGALFGAKMSQ
VLK*

MIP02960.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:58:05
Subject Length Description Subject Range Query Range Score Percent Strand
RhoGAP1A-PC 903 CG40494-PC 1..903 1..903 4588 100 Plus
RhoGAP1A-PF 903 CG40494-PF 1..903 1..903 4588 100 Plus
RhoGAP1A-PB 1403 CG00000-PB 302..1211 1..903 4570 99.2 Plus
RhoGAP1A-PA 1403 CG00000-PA 302..1211 1..903 4570 99.2 Plus
RhoGAP1A-PE 1404 CG40494-PE 302..1212 1..903 4558 99.1 Plus