MIP03067.complete Sequence
1156 bp assembled on 2009-01-26
GenBank Submission: BT058056.1
> MIP03067.complete
TCGGCACGAGACAAGTCAGTCGCTCAAAATTTTGTTTCCTTACAAAAAAT
TCACCGTGTTATTGCTCTAATAATTATAAAATATTTTGAAAAATTTAACA
ATGTGTAAATCGTGTGAGGAACAACCAGTTCGGTGCTGCTCAATTTTCTA
TGCCGCTTTCTGCATTTCATGCGGTCTCTTCATGCTCATTTTTTCGATTC
ACAATGTAATACTTTTGAAAAGCTCTATTACAGTCGTGGATTTTTATTTG
CATATGCATGGTGCTGACATGTCTCCCTCAACTTTCCGCATCCTTTACTC
GATGGATGTGATTTTTGCCCTTTCGTACGTCATTGCTGGAACTTTACTAG
CTGTTGGAATCCACCTGAACTCAAAGGGGGTCTTCTTCGCTGGCAAGATC
ATAAGCTATTTCTTTCCAATATATAACATCCTTTATGTATTTCCTTTAAT
TGTGCACATTGCCGCCACAGTGAAATTATGCAGATATCTTAAAGAGAACT
TTAATTAAATTAATTGGATCTAAGCAAGAGCAGTGGACTGGAAGGGATTA
AAATTGACAGCAGGATTATTGAAATATATTATAAAATTTTGGAAAAGATT
TAAGCTATTGCTTGCCGTACAGTTACACTATTTGTTTAAATATTCCTTGT
ACTGCTACTCGATTTTGTGGTGAAATTATTCAGTAAGAAAGAACTTTAAT
AACGGGGCAGATTCGACATTCACTGTGCACAAAACAAGGCTAATACTTCT
TTTATACCATTTTGAAAGAGTCCGCACAAAAATTAAGAACACAGCATATA
TACGCGGTAAAATTATGCTGCATGGAAAAGGAATACGTGTCGTGATCTAC
ATTGAGTGCTCTATAAATCTTAATAAATATTTTTATTGGTCTTAGAAAAG
AAATATCATATTGTCTGCAATATGTTTACATCATTTGTACTTTGTAAAAC
CTAGTCAGCAGTATATGGAAAACGTGGAAATTCGAAGTGACTACGAAACG
AATGGACTAAAATTTGCAATGCAATTCGAAATTTATCAGCAAACAAATTT
AAAACACTTGTCCCGTATCAAGTGAAATATAAATTATCCTAATATAAATA
AAAGGGTTTCCTAGCCGTGTTATGAAACGAGAAAAAAAAAAAAAAAAAAA
AAAAAA
MIP03067.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:22:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42393.a | 1655 | CG42393.a | 109..1231 | 11..1133 | 5615 | 100 | Plus |
CG42393.b | 1777 | CG42393.b | 109..1231 | 11..1133 | 5615 | 100 | Plus |
CG42393-RA | 1236 | CG42393-RA | 109..1231 | 11..1133 | 5615 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-17 00:06:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 18032448..18032804 | 11..367 | 1770 | 99.7 | Plus |
chr3L | 24539361 | chr3L | 18033020..18033372 | 445..797 | 1750 | 99.7 | Plus |
chr3L | 24539361 | chr3L | 18033708..18033908 | 931..1131 | 990 | 99.5 | Plus |
chr3L | 24539361 | chr3L | 18033428..18033564 | 798..934 | 685 | 100 | Plus |
chr3L | 24539361 | chr3L | 18032879..18032961 | 367..449 | 415 | 100 | Plus |
chr3L | 24539361 | chr3L | 18031235..18031337 | 931..1034 | 275 | 86.5 | Plus |
chr3L | 24539361 | chr3L | 18030477..18030536 | 389..448 | 195 | 88.3 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:01:34 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 00:06:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 18042754..18043110 | 11..367 | 1785 | 100 | Plus |
3L | 28110227 | 3L | 18043326..18043678 | 445..797 | 1750 | 99.7 | Plus |
3L | 28110227 | 3L | 18044014..18044216 | 931..1133 | 1000 | 99.5 | Plus |
3L | 28110227 | 3L | 18043734..18043870 | 798..934 | 685 | 100 | Plus |
3L | 28110227 | 3L | 18043185..18043267 | 367..449 | 415 | 100 | Plus |
3L | 28110227 | 3L | 18041542..18041644 | 931..1034 | 260 | 85.6 | Plus |
3L | 28110227 | 3L | 18040784..18040843 | 389..448 | 195 | 88.3 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:39:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 18035854..18036210 | 11..367 | 1785 | 100 | Plus |
3L | 28103327 | 3L | 18036426..18036778 | 445..797 | 1750 | 99.7 | Plus |
3L | 28103327 | 3L | 18037114..18037316 | 931..1133 | 1000 | 99.5 | Plus |
3L | 28103327 | 3L | 18036834..18036970 | 798..934 | 685 | 100 | Plus |
3L | 28103327 | 3L | 18036285..18036367 | 367..449 | 415 | 100 | Plus |
3L | 28103327 | 3L | 18034642..18034744 | 931..1034 | 270 | 85.5 | Plus |
3L | 28103327 | 3L | 18033884..18033943 | 389..448 | 195 | 88.3 | Plus |
Blast to na_te.dros performed on 2019-03-17 00:06:56 has no hits.
MIP03067.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 00:08:01 Download gff for
MIP03067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 18032448..18032804 | 11..367 | 91 | -> | Plus |
chr3L | 18032880..18032961 | 368..449 | 100 | -> | Plus |
chr3L | 18033025..18033372 | 450..797 | 100 | -> | Plus |
chr3L | 18033428..18033564 | 798..934 | 100 | -> | Plus |
chr3L | 18033712..18033908 | 935..1131 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:04:55 Download gff for
MIP03067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42393-RA | 1..408 | 101..508 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:33:34 Download gff for
MIP03067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42393-RA | 1..408 | 101..508 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:30:41 Download gff for
MIP03067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42393-RA | 1..408 | 101..508 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:12:25 Download gff for
MIP03067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42393-RA | 1..408 | 101..508 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-01-26 14:27:23 Download gff for
MIP03067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42393-RA | 22..1140 | 11..1129 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:33:34 Download gff for
MIP03067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42393-RA | 22..1140 | 11..1129 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:30:41 Download gff for
MIP03067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42393-RA | 22..1142 | 11..1131 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:12:25 Download gff for
MIP03067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42393-RA | 22..1142 | 11..1131 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:08:01 Download gff for
MIP03067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18042754..18043110 | 11..367 | 100 | -> | Plus |
3L | 18043186..18043267 | 368..449 | 100 | -> | Plus |
3L | 18043331..18043678 | 450..797 | 100 | -> | Plus |
3L | 18043734..18043870 | 798..934 | 100 | -> | Plus |
3L | 18044018..18044214 | 935..1131 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:08:01 Download gff for
MIP03067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18042754..18043110 | 11..367 | 100 | -> | Plus |
3L | 18043186..18043267 | 368..449 | 100 | -> | Plus |
3L | 18043331..18043678 | 450..797 | 100 | -> | Plus |
3L | 18043734..18043870 | 798..934 | 100 | -> | Plus |
3L | 18044018..18044214 | 935..1131 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:08:01 Download gff for
MIP03067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18042754..18043110 | 11..367 | 100 | -> | Plus |
3L | 18043186..18043267 | 368..449 | 100 | -> | Plus |
3L | 18043331..18043678 | 450..797 | 100 | -> | Plus |
3L | 18043734..18043870 | 798..934 | 100 | -> | Plus |
3L | 18044018..18044214 | 935..1131 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:30:41 Download gff for
MIP03067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 18035854..18036210 | 11..367 | 100 | -> | Plus |
arm_3L | 18036286..18036367 | 368..449 | 100 | -> | Plus |
arm_3L | 18036431..18036778 | 450..797 | 100 | -> | Plus |
arm_3L | 18036834..18036970 | 798..934 | 100 | -> | Plus |
arm_3L | 18037118..18037314 | 935..1131 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:06:50 Download gff for
MIP03067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18036834..18036970 | 798..934 | 100 | -> | Plus |
3L | 18037118..18037314 | 935..1131 | 100 | | Plus |
3L | 18035854..18036210 | 11..367 | 100 | -> | Plus |
3L | 18036286..18036367 | 368..449 | 100 | -> | Plus |
3L | 18036431..18036778 | 450..797 | 100 | -> | Plus |
MIP03067.pep Sequence
Translation from 100 to 507
> MIP03067.pep
MCKSCEEQPVRCCSIFYAAFCISCGLFMLIFSIHNVILLKSSITVVDFYL
HMHGADMSPSTFRILYSMDVIFALSYVIAGTLLAVGIHLNSKGVFFAGKI
ISYFFPIYNILYVFPLIVHIAATVKLCRYLKENFN*
MIP03067.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 10:56:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG13645-PA | 136 | GG13645-PA | 3..136 | 2..135 | 477 | 62.7 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:16:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42393-PA | 135 | CG42393-PA | 1..135 | 1..135 | 707 | 100 | Plus |
CG32192-PB | 136 | CG32192-PB | 3..136 | 2..135 | 472 | 61.2 | Plus |
CG32192-PC | 133 | CG32192-PC | 3..133 | 2..135 | 455 | 60.4 | Plus |
CG44163-PA | 118 | CG44163-PA | 8..117 | 12..134 | 174 | 36.6 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 10:56:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM14960-PA | 135 | GM14960-PA | 1..135 | 1..135 | 614 | 85.2 | Plus |
Dsec\GM14959-PA | 136 | GM14959-PA | 3..136 | 2..135 | 461 | 61.2 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 10:56:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD14739-PA | 135 | GD14739-PA | 1..135 | 1..135 | 647 | 90.4 | Plus |
Dsim\GD14738-PA | 141 | GD14738-PA | 73..141 | 67..135 | 210 | 55.1 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 10:56:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE19938-PA | 136 | GE19938-PA | 3..136 | 2..135 | 445 | 61.2 | Plus |
MIP03067.hyp Sequence
Translation from 100 to 507
> MIP03067.hyp
MCKSCEEQPVRCCSIFYAAFCISCGLFMLIFSIHNVILLKSSITVVDFYL
HMHGADMSPSTFRILYSMDVIFALSYVIAGTLLAVGIHLNSKGVFFAGKI
ISYFFPIYNILYVFPLIVHIAATVKLCRYLKENFN*
MIP03067.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:44:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42393-PA | 135 | CG42393-PA | 1..135 | 1..135 | 707 | 100 | Plus |
CG32192-PB | 136 | CG32192-PB | 3..136 | 2..135 | 472 | 61.2 | Plus |
CG32192-PC | 133 | CG32192-PC | 3..133 | 2..135 | 455 | 60.4 | Plus |
CG44163-PA | 118 | CG44163-PA | 8..117 | 12..134 | 174 | 36.6 | Plus |