Clone MIP03096 Report

Search the DGRC for MIP03096

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:30
Well:96
Vector:pOT2
Associated Gene/TranscriptMf-RK
Protein status:MIP03096.pep: gold
Sequenced Size:2553

Clone Sequence Records

MIP03096.complete Sequence

2553 bp assembled on 2009-04-04

GenBank Submission: BT081958.1

> MIP03096.complete
TAGATCGCTATTTTTTAGGAGTAAATTTAAATTCGAACGAGTTCAACGAT
TTTTTCGTGAACAGAACAAAACAAATCGATCAAAATGTTCAAAAACCACT
TGGAAATGATTGGGCGCAATGAGAGCCCCAGCAAGAAGGCGAAATTCTGG
CAGTCCTACATCAGGTCCCTGAAGGGCTCCGAGGATATCCGTGCCCACGA
GGCGCCCCGTGCCTCTCGTCCCTACAGCTCCTACCTGGACTCGCCCTCCT
ACAGGAGCATCTATGACGAGCCCGCCACCGCCAATGAGCGCGTCCAGTCC
TCTGGCTACAGATATCTGCCAGTGAGCCGCGACACCTACGGCTACTCGCC
CCGTGCCATCTACGATCATCACTACAGCCGAACAAGTAAGTTGGTACCAT
ATACGGACCACATACTGTACTATCTACAGCCGATTCCCGCCTAACTGCTT
CACACAGCCGAGTATCTGTATCTTAATGCTTCCGAAATCGGTGGCCTTGC
AAATGTGGATTGAACTAAGATATCCTGTTATTACCATTTAAAGTATATTT
CAAATAATATAGATAAATGATTATGATTGTTTACATAACAAATTATCCGC
CATGAAACTAAAAGATATTTTTAACATTCTTGAAACTGGAATAGTAACAT
AGATGAAATTCAGGTTCAAAAGTTTATGTCAATGCTTTCAATCTAGTTTT
TTAGAAAAAAACGTTTAAAATTTTAATTAAAATTTAAAATTAAAAAAGGC
AATCACCTGATTGTTATTTGCAAGGTTACATAAGCTTCGGTCCATCCGAA
CGCCACAAGTTCTTTCAGCCTTTCTGCTTCGCTTCGATGCGCCATCCATC
AATCAGTCAGTCAGTCAGTCAATCAGTCAGTCAATCAGTCGAGTCATTAC
AATCATCTTACAACTGCAATCTCGCCACTGCCTGCTATTGAAGCTTTTGA
CAACACCTTGAATATCTCAAAACCGCCATATTTTTATGCGTTTCATTTGA
GATGAAAACTGGTGCGAGCGCTATGATTTCATAAATTTAAAAATAAAAAT
GGACAGCGCCAAACGGCCAAATACAATTACGTCAATGAAAATTTTCGTTT
CGTATCGTTTCGTTTCGCCTCGGTCGTGTTGATTTTGGCAAAAGGCCTCA
AAAATGAACAAAAAAAATAAAAAAAATGAAGACAATAATATAGGCAACAC
ACACAGGCGCTATATATCAAGTCAGGTATATAAGCGGAATTTTTGACTCA
ATTTTTTTTTTTCGGTGCGTGCTCTGGGATCAAATGACTGTGGCGGCCCT
CGGTGCGCGGAAACCGAAGTTCTCTTTTCCGATTTTCCGAATTTCCACAC
ACTCACACACTGGCAAAAGCCCCAAGCACCCAAATCCGAACACCCAGCCC
CCTGAAGTCCGCCCATTTCACCTTCAACCTGGTACCCCGTTTGCCTAAAT
TATTTAGTTTTCTTTTCGCTTTTTTTTGGACTAACCAATTGTTTTTTTCT
TTTTCTCTCTCTTTCATAAATGTTTCAGAATATACATAAATGTGTGTCGT
CAAGATAAATACACATATGTATCCGAGCGATATACATATGTAGTATATAT
ATAAATTTTCTTGATATTTTATGCGCACTCTCTCGATATATATTTATATA
TATATTTGTTGTTCTCTCTAGGCAAAAGACAACTTAAATTTAGTGAACAG
GATTTTGTGTGTAGTTTTTAGTTAAAATATTGAAATTAGAAAGCAAATTA
TTGAGTAGCCAGTATATACATCTGTATATAAATATATGTATGTGTTTTGT
GTGTGAAATAAAATCTGTAAACAACATGCTGTTGCTTTTCTGTGGTGTTG
CATCCATCCATCCAGACCATCCGATCAACCAGACCATCCATCAAGGGCCA
TCAAAGGGTTTGCTATGAACTCCCATCGACTTGTATCATGACCACGGCTT
ACAGTTCATTTATAATAAATTGCTTTTTAATACGCTTTACTGATTTCCCG
ATTCCCTTCTTCTTCTATTTGCCGCTTTCGCTATGATATATGATAATATT
GCTTTCTGGGATGGCGTACGTATCGAATATTGCGCATACGTCGTGTGAGC
CCACGCTTTAAACATGCCACTTTCTTTCCAGCTAACTACGACGCAGAGAA
GGCCTGGAATGATCATCTGAAGCGCATGCAGGAGATCGAGCGCAGGTACC
CATCTCGCTATGGTCTCTACTTGAGGGACAAGCCACTCACGCCCAACTCG
CTGGTGCCCCTGGAGTACGAGCCAGAGGACAAGCTGCTGGCTGAGCTCAA
CAAGGGTAAGGATATCAAAGACATTTTCTAAATCCAATGCCAGACACAAA
AGTCCGACACCAACATCAGCAGGAAAGTAAACAACACAACAACATCAACA
ACGAAAATTTTAAAATTAATATATTTATACGAAATGTAAGCACGAACTCA
AAAAAAAAAAAAAATAGCAAATGAAATCTGATCGCAACATCCAAAAACGA
ACTCAACGAAATTTTTTTCAAATTCAGCCAACACAAAAAAAAAAAAAAAA
AAA

MIP03096.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:29:08
Subject Length Description Subject Range Query Range Score Percent Strand
Mf.g 1657 Mf.g 416..837 2126..2547 2110 100 Plus
Mf.c 1109 Mf.c 416..837 2126..2547 2110 100 Plus
Mf.d 2060 Mf.d 819..1240 2126..2547 2110 100 Plus
Mf.g 1657 Mf.g 31..415 1..385 1925 100 Plus
Mf.c 1109 Mf.c 31..415 1..385 1925 100 Plus
Mf.d 2060 Mf.d 434..818 1..385 1925 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 21:10:24
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 11001168..11003118 2125..175 9635 99.8 Minus
chr3R 27901430 chr3R 11000584..11000924 2534..2194 1705 100 Minus
chr3R 27901430 chr3R 11003666..11003808 176..34 700 99.3 Minus
chr3R 27901430 chr3R 11000991..11001062 2197..2126 360 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:01:38 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 21:10:22
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15176539..15178490 2125..175 9650 99.8 Minus
3R 32079331 3R 15175942..15176295 2547..2194 1770 100 Minus
3R 32079331 3R 15179038..15179180 176..34 715 100 Minus
3R 32079331 3R 15176362..15176433 2197..2126 360 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:45:48
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 14917370..14919321 2125..175 9670 99.8 Minus
3R 31820162 3R 14916773..14917126 2547..2194 1770 100 Minus
3R 31820162 3R 14919869..14920011 176..34 715 100 Minus
3R 31820162 3R 14917193..14917264 2197..2126 360 100 Minus
3R 31820162 3R 14921039..14921071 33..1 165 100 Minus
Blast to na_te.dros performed 2019-03-15 21:10:22
Subject Length Description Subject Range Query Range Score Percent Strand
Juan 4236 Juan JUAN 4236bp 3682..3792 2389..2496 151 62.2 Plus
gypsy9 5349 gypsy9 GYPSY9 5349bp 449..580 2379..2511 139 59 Plus
P-element 2907 P-element PPI251 2907bp AKA(V01520,X69493) Derived from X06779 (g58305) (Rel. 49, Last updated, Version 8). 2597..2688 2407..2495 138 66 Plus
rover 7318 rover ROVER 7318bp 765..855 2375..2471 119 62.9 Plus
rover 7318 rover ROVER 7318bp 916..1006 2375..2471 119 62.9 Plus

MIP03096.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 21:11:03 Download gff for MIP03096.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 11000584..11000922 2196..2534 92 <- Minus
chr3R 11000993..11001062 2126..2195 100 <- Minus
chr3R 11001168..11003117 176..2125 92 <- Minus
chr3R 11003667..11003808 34..175 99 <- Minus
chr3R 11004836..11004868 1..33 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed on 2009-10-19 18:08:37 has no hits.
Sim4 to dmel-all-CDS-r5.32.fasta performed on 2011-03-16 21:43:36 has no hits.
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:39:53 Download gff for MIP03096.complete
Subject Subject Range Query Range Percent Splice Strand
Mf-RK 1..360 85..444 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:45:46 Download gff for MIP03096.complete
Subject Subject Range Query Range Percent Splice Strand
Mf-RK 1..360 85..444 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed on 2009-04-04 15:21:21 has no hits.
Sim4 to dmel-all-transcript-r5.32.fasta performed on 2011-03-16 21:43:36 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:39:53 Download gff for MIP03096.complete
Subject Subject Range Query Range Percent Splice Strand
Mf-RK 1..2535 1..2534 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:45:46 Download gff for MIP03096.complete
Subject Subject Range Query Range Percent Splice Strand
Mf-RK 1..2535 1..2534 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:11:03 Download gff for MIP03096.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15175955..15176293 2196..2534 100 <- Minus
3R 15176364..15176433 2126..2195 100 <- Minus
3R 15176539..15178489 176..2125 99 <- Minus
3R 15179039..15179180 34..175 100 <- Minus
3R 15180208..15180240 1..33 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:11:03 Download gff for MIP03096.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15175955..15176293 2196..2534 100 <- Minus
3R 15176364..15176433 2126..2195 100 <- Minus
3R 15176539..15178489 176..2125 99 <- Minus
3R 15179039..15179180 34..175 100 <- Minus
3R 15180208..15180240 1..33 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:11:03 Download gff for MIP03096.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15175955..15176293 2196..2534 100 <- Minus
3R 15176364..15176433 2126..2195 100 <- Minus
3R 15176539..15178489 176..2125 99 <- Minus
3R 15179039..15179180 34..175 100 <- Minus
3R 15180208..15180240 1..33 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:39:53 Download gff for MIP03096.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11001677..11002015 2196..2534 100 <- Minus
arm_3R 11002086..11002155 2126..2195 100 <- Minus
arm_3R 11002261..11004211 176..2125 99 <- Minus
arm_3R 11004761..11004902 34..175 100 <- Minus
arm_3R 11005930..11005962 1..33 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:18:37 Download gff for MIP03096.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14916786..14917124 2196..2534 100 <- Minus
3R 14917195..14917264 2126..2195 100 <- Minus
3R 14917370..14919320 176..2125 99 <- Minus
3R 14919870..14920011 34..175 100 <- Minus
3R 14921039..14921071 1..33 100   Minus

MIP03096.pep Sequence

Translation from 84 to 443

> MIP03096.pep
MFKNHLEMIGRNESPSKKAKFWQSYIRSLKGSEDIRAHEAPRASRPYSSY
LDSPSYRSIYDEPATANERVQSSGYRYLPVSRDTYGYSPRAIYDHHYSRT
SKLVPYTDHILYYLQPIPA*

MIP03096.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 16:14:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17159-PA 370 GF17159-PA 1..100 1..100 502 96 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 16:14:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20880-PA 365 GG20880-PA 1..100 1..100 518 100 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 16:14:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14549-PA 367 GH14549-PA 1..100 1..100 509 97 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:04:30
Subject Length Description Subject Range Query Range Score Percent Strand
Mf-PP 119 CG6803-PP 1..119 1..119 637 100 Plus
Mf-PK 119 CG6803-PK 1..119 1..119 637 100 Plus
Mf-PN 157 CG6803-PN 1..108 1..110 543 93.6 Plus
Mf-PG 157 CG6803-PG 1..108 1..110 543 93.6 Plus
Mf-PA 157 CG6803-PA 1..108 1..110 543 93.6 Plus
Mf-PO 310 CG6803-PO 1..101 1..101 535 99 Plus
Mf-PE 166 CG6803-PE 1..100 1..100 534 100 Plus
Mf-PQ 168 CG6803-PQ 1..100 1..100 534 100 Plus
Mf-PC 168 CG6803-PC 1..100 1..100 534 100 Plus
Mf-PI 230 CG6803-PI 1..100 1..100 534 100 Plus
Mf-PH 236 CG6803-PH 1..100 1..100 534 100 Plus
Mf-PD 312 CG6803-PD 1..100 1..100 534 100 Plus
Mf-PJ 313 CG6803-PJ 1..100 1..100 534 100 Plus
Mf-PF 313 CG6803-PF 1..100 1..100 534 100 Plus
Mf-PM 364 CG6803-PM 1..100 1..100 534 100 Plus
Mf-PL 364 CG6803-PL 1..100 1..100 534 100 Plus
Mf-PB 365 CG6803-PB 1..100 1..100 534 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 16:14:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23663-PA 367 GI23663-PA 1..100 1..100 517 99 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 16:14:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21688-PA 367 GL21688-PA 1..100 1..100 505 96 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 16:14:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19873-PD 168 GA19873-PD 1..100 1..100 506 96 Plus
Dpse\GA19873-PA 313 GA19873-PA 1..100 1..100 505 96 Plus
Dpse\GA19873-PC 312 GA19873-PC 1..100 1..100 505 96 Plus
Dpse\GA19873-PB 367 GA19873-PB 1..100 1..100 505 96 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 16:14:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25804-PA 367 GM25804-PA 1..100 1..100 518 100 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 16:14:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20380-PA 236 GD20380-PA 1..100 1..100 517 100 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 16:14:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23223-PA 363 GJ23223-PA 1..100 1..100 507 97 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 16:14:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13979-PA 368 GK13979-PA 1..100 1..100 503 96 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 16:14:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE26409-PA 313 GE26409-PA 1..100 1..100 517 100 Plus

MIP03096.hyp Sequence

Translation from 84 to 443

> MIP03096.hyp
MFKNHLEMIGRNESPSKKAKFWQSYIRSLKGSEDIRAHEAPRASRPYSSY
LDSPSYRSIYDEPATANERVQSSGYRYLPVSRDTYGYSPRAIYDHHYSRT
SKLVPYTDHILYYLQPIPA*

MIP03096.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:16:26
Subject Length Description Subject Range Query Range Score Percent Strand
Mf-PP 119 CG6803-PP 1..119 1..119 637 100 Plus
Mf-PK 119 CG6803-PK 1..119 1..119 637 100 Plus
Mf-PN 157 CG6803-PN 1..108 1..110 543 93.6 Plus
Mf-PG 157 CG6803-PG 1..108 1..110 543 93.6 Plus
Mf-PA 157 CG6803-PA 1..108 1..110 543 93.6 Plus