MIP03096.complete Sequence
2553 bp assembled on 2009-04-04
GenBank Submission: BT081958.1
> MIP03096.complete
TAGATCGCTATTTTTTAGGAGTAAATTTAAATTCGAACGAGTTCAACGAT
TTTTTCGTGAACAGAACAAAACAAATCGATCAAAATGTTCAAAAACCACT
TGGAAATGATTGGGCGCAATGAGAGCCCCAGCAAGAAGGCGAAATTCTGG
CAGTCCTACATCAGGTCCCTGAAGGGCTCCGAGGATATCCGTGCCCACGA
GGCGCCCCGTGCCTCTCGTCCCTACAGCTCCTACCTGGACTCGCCCTCCT
ACAGGAGCATCTATGACGAGCCCGCCACCGCCAATGAGCGCGTCCAGTCC
TCTGGCTACAGATATCTGCCAGTGAGCCGCGACACCTACGGCTACTCGCC
CCGTGCCATCTACGATCATCACTACAGCCGAACAAGTAAGTTGGTACCAT
ATACGGACCACATACTGTACTATCTACAGCCGATTCCCGCCTAACTGCTT
CACACAGCCGAGTATCTGTATCTTAATGCTTCCGAAATCGGTGGCCTTGC
AAATGTGGATTGAACTAAGATATCCTGTTATTACCATTTAAAGTATATTT
CAAATAATATAGATAAATGATTATGATTGTTTACATAACAAATTATCCGC
CATGAAACTAAAAGATATTTTTAACATTCTTGAAACTGGAATAGTAACAT
AGATGAAATTCAGGTTCAAAAGTTTATGTCAATGCTTTCAATCTAGTTTT
TTAGAAAAAAACGTTTAAAATTTTAATTAAAATTTAAAATTAAAAAAGGC
AATCACCTGATTGTTATTTGCAAGGTTACATAAGCTTCGGTCCATCCGAA
CGCCACAAGTTCTTTCAGCCTTTCTGCTTCGCTTCGATGCGCCATCCATC
AATCAGTCAGTCAGTCAGTCAATCAGTCAGTCAATCAGTCGAGTCATTAC
AATCATCTTACAACTGCAATCTCGCCACTGCCTGCTATTGAAGCTTTTGA
CAACACCTTGAATATCTCAAAACCGCCATATTTTTATGCGTTTCATTTGA
GATGAAAACTGGTGCGAGCGCTATGATTTCATAAATTTAAAAATAAAAAT
GGACAGCGCCAAACGGCCAAATACAATTACGTCAATGAAAATTTTCGTTT
CGTATCGTTTCGTTTCGCCTCGGTCGTGTTGATTTTGGCAAAAGGCCTCA
AAAATGAACAAAAAAAATAAAAAAAATGAAGACAATAATATAGGCAACAC
ACACAGGCGCTATATATCAAGTCAGGTATATAAGCGGAATTTTTGACTCA
ATTTTTTTTTTTCGGTGCGTGCTCTGGGATCAAATGACTGTGGCGGCCCT
CGGTGCGCGGAAACCGAAGTTCTCTTTTCCGATTTTCCGAATTTCCACAC
ACTCACACACTGGCAAAAGCCCCAAGCACCCAAATCCGAACACCCAGCCC
CCTGAAGTCCGCCCATTTCACCTTCAACCTGGTACCCCGTTTGCCTAAAT
TATTTAGTTTTCTTTTCGCTTTTTTTTGGACTAACCAATTGTTTTTTTCT
TTTTCTCTCTCTTTCATAAATGTTTCAGAATATACATAAATGTGTGTCGT
CAAGATAAATACACATATGTATCCGAGCGATATACATATGTAGTATATAT
ATAAATTTTCTTGATATTTTATGCGCACTCTCTCGATATATATTTATATA
TATATTTGTTGTTCTCTCTAGGCAAAAGACAACTTAAATTTAGTGAACAG
GATTTTGTGTGTAGTTTTTAGTTAAAATATTGAAATTAGAAAGCAAATTA
TTGAGTAGCCAGTATATACATCTGTATATAAATATATGTATGTGTTTTGT
GTGTGAAATAAAATCTGTAAACAACATGCTGTTGCTTTTCTGTGGTGTTG
CATCCATCCATCCAGACCATCCGATCAACCAGACCATCCATCAAGGGCCA
TCAAAGGGTTTGCTATGAACTCCCATCGACTTGTATCATGACCACGGCTT
ACAGTTCATTTATAATAAATTGCTTTTTAATACGCTTTACTGATTTCCCG
ATTCCCTTCTTCTTCTATTTGCCGCTTTCGCTATGATATATGATAATATT
GCTTTCTGGGATGGCGTACGTATCGAATATTGCGCATACGTCGTGTGAGC
CCACGCTTTAAACATGCCACTTTCTTTCCAGCTAACTACGACGCAGAGAA
GGCCTGGAATGATCATCTGAAGCGCATGCAGGAGATCGAGCGCAGGTACC
CATCTCGCTATGGTCTCTACTTGAGGGACAAGCCACTCACGCCCAACTCG
CTGGTGCCCCTGGAGTACGAGCCAGAGGACAAGCTGCTGGCTGAGCTCAA
CAAGGGTAAGGATATCAAAGACATTTTCTAAATCCAATGCCAGACACAAA
AGTCCGACACCAACATCAGCAGGAAAGTAAACAACACAACAACATCAACA
ACGAAAATTTTAAAATTAATATATTTATACGAAATGTAAGCACGAACTCA
AAAAAAAAAAAAAATAGCAAATGAAATCTGATCGCAACATCCAAAAACGA
ACTCAACGAAATTTTTTTCAAATTCAGCCAACACAAAAAAAAAAAAAAAA
AAA
MIP03096.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:29:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mf.g | 1657 | Mf.g | 416..837 | 2126..2547 | 2110 | 100 | Plus |
Mf.c | 1109 | Mf.c | 416..837 | 2126..2547 | 2110 | 100 | Plus |
Mf.d | 2060 | Mf.d | 819..1240 | 2126..2547 | 2110 | 100 | Plus |
Mf.g | 1657 | Mf.g | 31..415 | 1..385 | 1925 | 100 | Plus |
Mf.c | 1109 | Mf.c | 31..415 | 1..385 | 1925 | 100 | Plus |
Mf.d | 2060 | Mf.d | 434..818 | 1..385 | 1925 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 21:10:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 11001168..11003118 | 2125..175 | 9635 | 99.8 | Minus |
chr3R | 27901430 | chr3R | 11000584..11000924 | 2534..2194 | 1705 | 100 | Minus |
chr3R | 27901430 | chr3R | 11003666..11003808 | 176..34 | 700 | 99.3 | Minus |
chr3R | 27901430 | chr3R | 11000991..11001062 | 2197..2126 | 360 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:01:38 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 21:10:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15176539..15178490 | 2125..175 | 9650 | 99.8 | Minus |
3R | 32079331 | 3R | 15175942..15176295 | 2547..2194 | 1770 | 100 | Minus |
3R | 32079331 | 3R | 15179038..15179180 | 176..34 | 715 | 100 | Minus |
3R | 32079331 | 3R | 15176362..15176433 | 2197..2126 | 360 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:45:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 14917370..14919321 | 2125..175 | 9670 | 99.8 | Minus |
3R | 31820162 | 3R | 14916773..14917126 | 2547..2194 | 1770 | 100 | Minus |
3R | 31820162 | 3R | 14919869..14920011 | 176..34 | 715 | 100 | Minus |
3R | 31820162 | 3R | 14917193..14917264 | 2197..2126 | 360 | 100 | Minus |
3R | 31820162 | 3R | 14921039..14921071 | 33..1 | 165 | 100 | Minus |
Blast to na_te.dros performed 2019-03-15 21:10:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Juan | 4236 | Juan JUAN 4236bp | 3682..3792 | 2389..2496 | 151 | 62.2 | Plus |
gypsy9 | 5349 | gypsy9 GYPSY9 5349bp | 449..580 | 2379..2511 | 139 | 59 | Plus |
P-element | 2907 | P-element PPI251 2907bp AKA(V01520,X69493) Derived from X06779 (g58305) (Rel. 49, Last updated, Version 8). | 2597..2688 | 2407..2495 | 138 | 66 | Plus |
rover | 7318 | rover ROVER 7318bp | 765..855 | 2375..2471 | 119 | 62.9 | Plus |
rover | 7318 | rover ROVER 7318bp | 916..1006 | 2375..2471 | 119 | 62.9 | Plus |
MIP03096.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 21:11:03 Download gff for
MIP03096.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 11000584..11000922 | 2196..2534 | 92 | <- | Minus |
chr3R | 11000993..11001062 | 2126..2195 | 100 | <- | Minus |
chr3R | 11001168..11003117 | 176..2125 | 92 | <- | Minus |
chr3R | 11003667..11003808 | 34..175 | 99 | <- | Minus |
chr3R | 11004836..11004868 | 1..33 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed on 2009-10-19 18:08:37 has no hits.
Sim4 to dmel-all-CDS-r5.32.fasta performed on 2011-03-16 21:43:36 has no hits.
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:39:53 Download gff for
MIP03096.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mf-RK | 1..360 | 85..444 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:45:46 Download gff for
MIP03096.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mf-RK | 1..360 | 85..444 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed on 2009-04-04 15:21:21 has no hits.
Sim4 to dmel-all-transcript-r5.32.fasta performed on 2011-03-16 21:43:36 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:39:53 Download gff for
MIP03096.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mf-RK | 1..2535 | 1..2534 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:45:46 Download gff for
MIP03096.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mf-RK | 1..2535 | 1..2534 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:11:03 Download gff for
MIP03096.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15175955..15176293 | 2196..2534 | 100 | <- | Minus |
3R | 15176364..15176433 | 2126..2195 | 100 | <- | Minus |
3R | 15176539..15178489 | 176..2125 | 99 | <- | Minus |
3R | 15179039..15179180 | 34..175 | 100 | <- | Minus |
3R | 15180208..15180240 | 1..33 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:11:03 Download gff for
MIP03096.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15175955..15176293 | 2196..2534 | 100 | <- | Minus |
3R | 15176364..15176433 | 2126..2195 | 100 | <- | Minus |
3R | 15176539..15178489 | 176..2125 | 99 | <- | Minus |
3R | 15179039..15179180 | 34..175 | 100 | <- | Minus |
3R | 15180208..15180240 | 1..33 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:11:03 Download gff for
MIP03096.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15175955..15176293 | 2196..2534 | 100 | <- | Minus |
3R | 15176364..15176433 | 2126..2195 | 100 | <- | Minus |
3R | 15176539..15178489 | 176..2125 | 99 | <- | Minus |
3R | 15179039..15179180 | 34..175 | 100 | <- | Minus |
3R | 15180208..15180240 | 1..33 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:39:53 Download gff for
MIP03096.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11001677..11002015 | 2196..2534 | 100 | <- | Minus |
arm_3R | 11002086..11002155 | 2126..2195 | 100 | <- | Minus |
arm_3R | 11002261..11004211 | 176..2125 | 99 | <- | Minus |
arm_3R | 11004761..11004902 | 34..175 | 100 | <- | Minus |
arm_3R | 11005930..11005962 | 1..33 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:18:37 Download gff for
MIP03096.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 14916786..14917124 | 2196..2534 | 100 | <- | Minus |
3R | 14917195..14917264 | 2126..2195 | 100 | <- | Minus |
3R | 14917370..14919320 | 176..2125 | 99 | <- | Minus |
3R | 14919870..14920011 | 34..175 | 100 | <- | Minus |
3R | 14921039..14921071 | 1..33 | 100 | | Minus |
MIP03096.pep Sequence
Translation from 84 to 443
> MIP03096.pep
MFKNHLEMIGRNESPSKKAKFWQSYIRSLKGSEDIRAHEAPRASRPYSSY
LDSPSYRSIYDEPATANERVQSSGYRYLPVSRDTYGYSPRAIYDHHYSRT
SKLVPYTDHILYYLQPIPA*
MIP03096.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 16:14:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF17159-PA | 370 | GF17159-PA | 1..100 | 1..100 | 502 | 96 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 16:14:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG20880-PA | 365 | GG20880-PA | 1..100 | 1..100 | 518 | 100 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 16:14:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH14549-PA | 367 | GH14549-PA | 1..100 | 1..100 | 509 | 97 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:04:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mf-PP | 119 | CG6803-PP | 1..119 | 1..119 | 637 | 100 | Plus |
Mf-PK | 119 | CG6803-PK | 1..119 | 1..119 | 637 | 100 | Plus |
Mf-PN | 157 | CG6803-PN | 1..108 | 1..110 | 543 | 93.6 | Plus |
Mf-PG | 157 | CG6803-PG | 1..108 | 1..110 | 543 | 93.6 | Plus |
Mf-PA | 157 | CG6803-PA | 1..108 | 1..110 | 543 | 93.6 | Plus |
Mf-PO | 310 | CG6803-PO | 1..101 | 1..101 | 535 | 99 | Plus |
Mf-PE | 166 | CG6803-PE | 1..100 | 1..100 | 534 | 100 | Plus |
Mf-PQ | 168 | CG6803-PQ | 1..100 | 1..100 | 534 | 100 | Plus |
Mf-PC | 168 | CG6803-PC | 1..100 | 1..100 | 534 | 100 | Plus |
Mf-PI | 230 | CG6803-PI | 1..100 | 1..100 | 534 | 100 | Plus |
Mf-PH | 236 | CG6803-PH | 1..100 | 1..100 | 534 | 100 | Plus |
Mf-PD | 312 | CG6803-PD | 1..100 | 1..100 | 534 | 100 | Plus |
Mf-PJ | 313 | CG6803-PJ | 1..100 | 1..100 | 534 | 100 | Plus |
Mf-PF | 313 | CG6803-PF | 1..100 | 1..100 | 534 | 100 | Plus |
Mf-PM | 364 | CG6803-PM | 1..100 | 1..100 | 534 | 100 | Plus |
Mf-PL | 364 | CG6803-PL | 1..100 | 1..100 | 534 | 100 | Plus |
Mf-PB | 365 | CG6803-PB | 1..100 | 1..100 | 534 | 100 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 16:14:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI23663-PA | 367 | GI23663-PA | 1..100 | 1..100 | 517 | 99 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 16:14:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL21688-PA | 367 | GL21688-PA | 1..100 | 1..100 | 505 | 96 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 16:14:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA19873-PD | 168 | GA19873-PD | 1..100 | 1..100 | 506 | 96 | Plus |
Dpse\GA19873-PA | 313 | GA19873-PA | 1..100 | 1..100 | 505 | 96 | Plus |
Dpse\GA19873-PC | 312 | GA19873-PC | 1..100 | 1..100 | 505 | 96 | Plus |
Dpse\GA19873-PB | 367 | GA19873-PB | 1..100 | 1..100 | 505 | 96 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 16:14:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM25804-PA | 367 | GM25804-PA | 1..100 | 1..100 | 518 | 100 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 16:14:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD20380-PA | 236 | GD20380-PA | 1..100 | 1..100 | 517 | 100 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 16:14:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ23223-PA | 363 | GJ23223-PA | 1..100 | 1..100 | 507 | 97 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 16:14:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK13979-PA | 368 | GK13979-PA | 1..100 | 1..100 | 503 | 96 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 16:14:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE26409-PA | 313 | GE26409-PA | 1..100 | 1..100 | 517 | 100 | Plus |
MIP03096.hyp Sequence
Translation from 84 to 443
> MIP03096.hyp
MFKNHLEMIGRNESPSKKAKFWQSYIRSLKGSEDIRAHEAPRASRPYSSY
LDSPSYRSIYDEPATANERVQSSGYRYLPVSRDTYGYSPRAIYDHHYSRT
SKLVPYTDHILYYLQPIPA*
MIP03096.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:16:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mf-PP | 119 | CG6803-PP | 1..119 | 1..119 | 637 | 100 | Plus |
Mf-PK | 119 | CG6803-PK | 1..119 | 1..119 | 637 | 100 | Plus |
Mf-PN | 157 | CG6803-PN | 1..108 | 1..110 | 543 | 93.6 | Plus |
Mf-PG | 157 | CG6803-PG | 1..108 | 1..110 | 543 | 93.6 | Plus |
Mf-PA | 157 | CG6803-PA | 1..108 | 1..110 | 543 | 93.6 | Plus |