Clone MIP03871 Report

Search the DGRC for MIP03871

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:38
Well:71
Vector:pOT2
Associated Gene/TranscriptCG4631-RA
Protein status:MIP03871.pep: gold
Sequenced Size:2686

Clone Sequence Records

MIP03871.complete Sequence

2686 bp assembled on 2009-04-29

GenBank Submission: BT082096.1

> MIP03871.complete
ATGCTTCGAAAATTACAGCACAGAAATCATTCAAAATTTTAGTCTGGAAC
TGGCGGCAATCACAAAATTTGTACTTTCGTAAATACCTGGTTTTCGGAAC
GCCAAGACGGTCAGGCCAAAATGAATTCCTGCTGCTGTAGATCGCATAGC
GATCGCACGAACCCGATGGCCTGTCTTCCTCAGTTTCCACGTCTGCAGCG
TGTCCAAAGTTGTCGGCCATTTTTGGAGGGACGAAAGGCAGCCAGCTGTT
GTGTTTCGGGCGAGAGGCGATGGGGTCAGAGAAACGGTTGTATGATCCAG
GTGCTGGCCAAGATGGTCAATAAGTCGTCCAGTACGGTCTGCCAATTTCT
ACACCAATTGACACTGCAGGTCTTTGCGAGAATTCTATATCCTTTGATGT
TAGGCTGGAATACGCTGAAGGTACCGTTTGTTATACCCGACATCTGTGAG
CTATACTACGGGATATTCGACGAATGTGGTAACATAAGGGGTTCCATACC
AACAAGGACGTTGCTCATCCTCATATCCATGATCCAGTATTTTCTCAATC
TACCGAAGAGATGTGGACAAAATAGCGCTTGTTCGGGATGCAGAAGCCAG
ACGGATGATTTGAGGAACATTCACAGTCCCGGTTATTGTGGCAAAAATGC
CATGACGCCATTCTCGGGACGGGGGATTACGGAAAAAGGACCATCGAAGG
GAAGTGATGTGTGGGCGGGACTTAAGCGATTGGGATACGAAAGACGTGGC
GATCTAGATAGTTATCCCTCGGATGAGTCTATACCATATGGCTATGCACC
CCATCGATGTCCTTGCCAGGCCGGAAGTCCCAGAATCCAGAGATCCGGAA
TTTTGAACCCGTATGCAAATAGGCCTGGGGCCATGAGATCGTTGGTCTGC
GCAGAGGAACTGGAAAGTTCCATGTTAGATTCCGACTATAATCAGCAAAT
TCCAATGGCACCCATTTCACCAAAAGCAGCTCAAATTATTCACATTAATC
ACATCTCGAATCTATATGCTGCAGTCGTACAAAACCAACATACAAGACAA
TTATTTGCTGATGGAAGGCCACCAAGGCCGCGGGTAAGACCCTGTACTGA
GAACCAAAACAGATTCTCCGGTGGTTTCATGATGCCCGAACCATATTTCA
ATGGTATGCCATGGAGTTGGCTGCACAGAGATCCTCAGAGAATGATACGT
CTACCAAGTGGTGGTCTTCCTTTGGAAATACCGCGTTACAGACGACAACC
TTTGGATGAAGAGTACCACAGTTTTAAAAGTAAATATGAACACTTGAGCA
GACGGGATAACCCCTTCAAAGGAAGTAGTCTATTGCCTTTAGACACTTAC
CCATCTGAGAATAGATTTAACCAAGGAAATAGGTTGCAATCTATAAGTTG
GGAGAAAAAAATACTGGATCATCAAAATCAGCCTACAAAAAATATTTCCA
ATAATCTAATAATCCCAATTAAACAACAAAGAAAACTTGAGTGGGAGCAG
CTCTTTATAAAAAGAATTAATGATGCAAAGAAAACTAAGGGAACTTTTGA
TTTCTGGAATGAGATGATAGAGAGAAATAAGTTCAAAGCATTTCAGCAAG
CAATAAAGGACACCAAACCAGTATTCCCTTCAAAAGAGATTGGGTATTCT
CAATCAAGGAAAGATAGTGCCCACATTATAACGAAGAGAAGCAATAATTC
CTTGCGATCGGCGAGGCAAAACCAAAAGAAATTGGAAATCGAAAAACCTG
AAATTTCGAAAAGGTCAAATAATAATCGAACTCATGTTTCAGCACAACAT
CGAGTGAAACAACTTTGTAGTAGCCAAGAAAAGCAGACTTTAAAAAATCA
AATTCAACAAGATACCTATAAAATTAAATCTGTAAATAACACTCCGCATT
TGGCAAAGAATGAAATAATTCCTCAACCAAAATATCCTGATCCCGAAGAT
TATAGAAAAGAACGGGCTAGAAATCTAAAATTTAATAGAAAAACTGCCGG
AGAATCCGTAATGCTAATAAAGCCTGCAAAAAGTATCATAAAGAAGCCTA
AAGAGACTCAGTTAAAGGACGTAAGCCAGGATGAGTTGGAAAGTTTAAAG
AAACAATTAGAGATGAATACAAATAATAAAAGGGTACGATTTAGTGTACC
CACACCTTACAGCAATGAAAGAGTGATGCCAGCAGAAAAATATGTTCTTC
TTGAAGCTGGAGATCAGATACCTAAGCACTTCAGTAAGCTTCATAGTCAA
GATAAAAGTGCTACAAAAAGTGTATTTAGCCGAAGATCGGGAAAGTCACC
GGAACGAGGTTTTAGGAAAAAACGATTGCATTCAGAAGATGGTACCGAAC
TGCCCACATATAGTAAACGAGCAGCGATGGGTTCTCAAAATAAATATTAT
GGAAATACCAAAGCAAAGCCAAACAAACCACACGGTAAAAGTTGTAAAAT
CATGCCCAAAGTATTGTATTCCAGAGAGGAAACACTGAAGAAATTGAGTT
ATTTGTTATGATTGCAGCGTTATTTAATATATATATATCTATCGGATTGA
TGTTATATCCAATATTCACCTGAATAATCTAAAATCCATATGGTATATAT
TTGTTACTAAGCTTAACCCGGGATTGTATAGAGATACCACGCCTGACCGC
CTATTAAATTTTCGTTTGAAAAAAAAAAAAAAAAAA

MIP03871.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:24:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG4631-RA 2458 CG4631-RA 1..2458 54..2511 12290 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 10:51:07
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 16606119..16608786 1..2668 13145 99.5 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:02:29 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 10:51:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16607370..16610041 1..2672 13345 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:19:10
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16607370..16610041 1..2672 13345 99.9 Plus
Blast to na_te.dros performed 2019-03-16 10:51:06
Subject Length Description Subject Range Query Range Score Percent Strand
GATE 8507 GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). 601..648 1013..965 116 73.5 Minus

MIP03871.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 10:52:02 Download gff for MIP03871.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 16606119..16608786 1..2668 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:51:19 Download gff for MIP03871.complete
Subject Subject Range Query Range Percent Splice Strand
CG4631-RA 1..2391 121..2511 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:49:50 Download gff for MIP03871.complete
Subject Subject Range Query Range Percent Splice Strand
CG4631-RA 1..2391 121..2511 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 11:03:22 Download gff for MIP03871.complete
Subject Subject Range Query Range Percent Splice Strand
CG4631-RA 1..2391 121..2511 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:18:09 Download gff for MIP03871.complete
Subject Subject Range Query Range Percent Splice Strand
CG4631-RA 1..2391 121..2511 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-04-29 09:46:52 Download gff for MIP03871.complete
Subject Subject Range Query Range Percent Splice Strand
CG4631-RA 1..2458 54..2511 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:49:50 Download gff for MIP03871.complete
Subject Subject Range Query Range Percent Splice Strand
CG4631-RA 1..2615 54..2668 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:03:22 Download gff for MIP03871.complete
Subject Subject Range Query Range Percent Splice Strand
CG4631-RA 1..2668 1..2668 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:18:09 Download gff for MIP03871.complete
Subject Subject Range Query Range Percent Splice Strand
CG4631-RA 1..2668 1..2668 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:52:02 Download gff for MIP03871.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16607370..16610037 1..2668 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:52:02 Download gff for MIP03871.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16607370..16610037 1..2668 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:52:02 Download gff for MIP03871.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16607370..16610037 1..2668 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:03:22 Download gff for MIP03871.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16607370..16610037 1..2668 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:40:43 Download gff for MIP03871.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16607370..16610037 1..2668 99   Plus

MIP03871.pep Sequence

Translation from 120 to 2510

> MIP03871.pep
MNSCCCRSHSDRTNPMACLPQFPRLQRVQSCRPFLEGRKAASCCVSGERR
WGQRNGCMIQVLAKMVNKSSSTVCQFLHQLTLQVFARILYPLMLGWNTLK
VPFVIPDICELYYGIFDECGNIRGSIPTRTLLILISMIQYFLNLPKRCGQ
NSACSGCRSQTDDLRNIHSPGYCGKNAMTPFSGRGITEKGPSKGSDVWAG
LKRLGYERRGDLDSYPSDESIPYGYAPHRCPCQAGSPRIQRSGILNPYAN
RPGAMRSLVCAEELESSMLDSDYNQQIPMAPISPKAAQIIHINHISNLYA
AVVQNQHTRQLFADGRPPRPRVRPCTENQNRFSGGFMMPEPYFNGMPWSW
LHRDPQRMIRLPSGGLPLEIPRYRRQPLDEEYHSFKSKYEHLSRRDNPFK
GSSLLPLDTYPSENRFNQGNRLQSISWEKKILDHQNQPTKNISNNLIIPI
KQQRKLEWEQLFIKRINDAKKTKGTFDFWNEMIERNKFKAFQQAIKDTKP
VFPSKEIGYSQSRKDSAHIITKRSNNSLRSARQNQKKLEIEKPEISKRSN
NNRTHVSAQHRVKQLCSSQEKQTLKNQIQQDTYKIKSVNNTPHLAKNEII
PQPKYPDPEDYRKERARNLKFNRKTAGESVMLIKPAKSIIKKPKETQLKD
VSQDELESLKKQLEMNTNNKRVRFSVPTPYSNERVMPAEKYVLLEAGDQI
PKHFSKLHSQDKSATKSVFSRRSGKSPERGFRKKRLHSEDGTELPTYSKR
AAMGSQNKYYGNTKAKPNKPHGKSCKIMPKVLYSREETLKKLSYLL*

MIP03871.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:27:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14001-PA 803 GF14001-PA 1..779 1..758 1151 37.4 Plus
Dana\GF14000-PA 380 GF14000-PA 46..144 46..143 205 42.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:27:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22755-PA 824 GG22755-PA 1..811 1..788 3221 76.1 Plus
Dere\GG21474-PA 460 GG21474-PA 75..167 50..142 165 38.7 Plus
Dere\GG22754-PA 448 GG22754-PA 29..117 41..129 156 34.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 17:27:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH25195-PA 461 GH25195-PA 39..138 46..145 204 43.6 Plus
Dgri\GH25194-PA 439 GH25194-PA 27..120 51..144 178 37.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:33:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG4631-PA 796 CG4631-PA 1..796 1..796 4244 100 Plus
CG31815-PA 443 CG31815-PA 31..133 42..143 163 36.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 17:27:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19646-PA 607 GL19646-PA 1..321 1..337 466 33.9 Plus
Dper\GL19645-PA 458 GL19645-PA 54..152 51..154 203 37.5 Plus
Dper\GL26121-PA 863 GL26121-PA 69..167 44..142 195 36.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:27:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18317-PA 607 GA18317-PA 1..321 1..337 467 34.1 Plus
Dpse\GA16499-PA 460 GA16499-PA 54..195 51..193 203 33.8 Plus
Dpse\GA22425-PA 878 GA22425-PA 69..167 44..142 194 36.4 Plus
Dpse\GA11108-PA 856 GA11108-PA 69..167 44..142 193 36.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:27:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17188-PA 791 GM17188-PA 1..788 1..790 3681 89.1 Plus
Dsec\GM17187-PA 438 GM17187-PA 3..119 1..129 175 33.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:27:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24064-PA 791 GD24064-PA 1..788 1..790 3658 88.6 Plus
Dsim\GD24063-PA 440 GD24063-PA 3..119 1..129 168 32.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 17:27:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21120-PA 475 GK21120-PA 19..129 43..153 242 41.4 Plus
Dwil\GK21119-PA 1096 GK21119-PA 671..762 49..139 170 39.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:27:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12749-PA 796 GE12749-PA 1..790 1..788 3259 77.6 Plus
Dyak\GE18099-PA 443 GE18099-PA 3..133 1..143 208 34.9 Plus
Dyak\GE12976-PA 459 GE12976-PA 71..167 46..142 174 40.2 Plus

MIP03871.hyp Sequence

Translation from 120 to 2510

> MIP03871.hyp
MNSCCCRSHSDRTNPMACLPQFPRLQRVQSCRPFLEGRKAASCCVSGERR
WGQRNGCMIQVLAKMVNKSSSTVCQFLHQLTLQVFARILYPLMLGWNTLK
VPFVIPDICELYYGIFDECGNIRGSIPTRTLLILISMIQYFLNLPKRCGQ
NSACSGCRSQTDDLRNIHSPGYCGKNAMTPFSGRGITEKGPSKGSDVWAG
LKRLGYERRGDLDSYPSDESIPYGYAPHRCPCQAGSPRIQRSGILNPYAN
RPGAMRSLVCAEELESSMLDSDYNQQIPMAPISPKAAQIIHINHISNLYA
AVVQNQHTRQLFADGRPPRPRVRPCTENQNRFSGGFMMPEPYFNGMPWSW
LHRDPQRMIRLPSGGLPLEIPRYRRQPLDEEYHSFKSKYEHLSRRDNPFK
GSSLLPLDTYPSENRFNQGNRLQSISWEKKILDHQNQPTKNISNNLIIPI
KQQRKLEWEQLFIKRINDAKKTKGTFDFWNEMIERNKFKAFQQAIKDTKP
VFPSKEIGYSQSRKDSAHIITKRSNNSLRSARQNQKKLEIEKPEISKRSN
NNRTHVSAQHRVKQLCSSQEKQTLKNQIQQDTYKIKSVNNTPHLAKNEII
PQPKYPDPEDYRKERARNLKFNRKTAGESVMLIKPAKSIIKKPKETQLKD
VSQDELESLKKQLEMNTNNKRVRFSVPTPYSNERVMPAEKYVLLEAGDQI
PKHFSKLHSQDKSATKSVFSRRSGKSPERGFRKKRLHSEDGTELPTYSKR
AAMGSQNKYYGNTKAKPNKPHGKSCKIMPKVLYSREETLKKLSYLL*

MIP03871.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:16:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG4631-PA 796 CG4631-PA 1..796 1..796 4244 100 Plus
CG31815-PA 443 CG31815-PA 31..133 42..143 163 36.9 Plus