Clone MIP03922 Report

Search the DGRC for MIP03922

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:39
Well:22
Vector:pOT2
Associated Gene/TranscriptCG33260-RC
Protein status:MIP03922.pep: gold
Sequenced Size:919

Clone Sequence Records

MIP03922.complete Sequence

919 bp assembled on 2011-09-23

GenBank Submission: BT132632.1

> MIP03922.complete
ATTTTTGCAAAAATGTATTTAACTCTGCTAAACGGTACTGGCTTCGTTTT
CAACGTGGATGATTACATGGAACTGCGGAGCAAACATCGCATAATGGGTG
CTCCAGTGGGCACAGCGAACACAAAAGGCTGGAGTCCTAATCAATCCACT
CTGCCCGTGGAGCTCAGTAAATTTGAAACCCAATTGCTTTTGGATGAGAA
TATAGCAAAGTTAGTTGATAAATCCAAAGATCTAAAGGCTAAACCCACTG
CCGAGAAACTTGAGGAGTGCAAGGCGGATTTTGAATCCCGGTTACTGGGA
CAGGAGGAAGCATTGAAAACGGAGAAACTACGGGAAACTGAACGATACAT
GGATAAGATTCTGACGGGAAAACGCAAGAAGTTGCTCAAGCAGGGCAAAA
ATGAATTGGCTGCCGCTCTGACTGATAAGGATGTACTATTGGAGATGTCT
GTGAATTTCAAATTCGATCGCCAAAATGCCTTGCTGGAGGTGCATTGTGA
ACATCCCACGGATCACTCTGCGCAAATAGTTACCGGTCCCATTGTGCACA
CCAATTCCCTGAAATACCGCGTTTTCAAAGATCTGTGGAGGCGCGGAAAG
TACGTGACTTCCGGCGATGCATTTGGAGCGGACTTTCTGGTTTACCCCGG
CGATCCCATGATCTACCACGCCTCCCACATTGTAATTTTGCACGAGCAAC
CTGTAATTAAGCCCCTGGAACTGATAGCAAAAGTTCGTCTATCGGTAATT
GTCAACAAAAGCTGCGTTTTCGCCTACGAGATGGAAAATAATGAGGAAGA
AATACATTACCAAACGGTCGCATGGTGCAATCTTGGAAAATGAGGAAATC
ACAGGCAAGTACATGGAGCAAAAAACATGAAATGTGACCATAAAATTCTG
ACAAAAAAAAAAAAAAAAA

MIP03922.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:09:08
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 14750630..14751014 902..518 1910 99.7 Minus
chr3L 24539361 chr3L 14751402..14751662 409..149 1305 100 Minus
chr3L 24539361 chr3L 14751077..14751185 517..409 545 100 Minus
chr3L 24539361 chr3L 14751750..14751837 148..61 440 100 Minus
chr3L 24539361 chr3L 14751890..14751954 65..1 310 98.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:09:06
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14760515..14760904 907..518 1950 100 Minus
3L 28110227 3L 14761292..14761552 409..149 1305 100 Minus
3L 28110227 3L 14760967..14761075 517..409 545 100 Minus
3L 28110227 3L 14761640..14761727 148..61 440 100 Minus
3L 28110227 3L 14761780..14761844 65..1 310 98.5 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:13:49
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 14753615..14754004 907..518 1950 100 Minus
3L 28103327 3L 14754392..14754652 409..149 1305 100 Minus
3L 28103327 3L 14754067..14754175 517..409 545 100 Minus
3L 28103327 3L 14754740..14754827 148..61 440 100 Minus
3L 28103327 3L 14754880..14754944 65..1 310 98.4 Minus
Blast to na_te.dros performed on 2019-03-15 11:09:06 has no hits.

MIP03922.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:10:02 Download gff for MIP03922.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 14750630..14751014 518..902 99 <- Minus
chr3L 14751077..14751184 410..517 100 <- Minus
chr3L 14751402..14751662 149..409 100 <- Minus
chr3L 14751750..14751836 62..148 100 <- Minus
chr3L 14751894..14751954 1..61 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-09-23 14:47:15 Download gff for MIP03922.complete
Subject Subject Range Query Range Percent Splice Strand
CG33260-RC 1..831 13..843 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:37:42 Download gff for MIP03922.complete
Subject Subject Range Query Range Percent Splice Strand
CG33260-RC 1..831 13..843 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:24:23 Download gff for MIP03922.complete
Subject Subject Range Query Range Percent Splice Strand
CG33260-RC 1..831 13..843 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-23 14:47:14 Download gff for MIP03922.complete
Subject Subject Range Query Range Percent Splice Strand
CG33260-RC 1..843 1..843 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:37:42 Download gff for MIP03922.complete
Subject Subject Range Query Range Percent Splice Strand
CG33260-RC 1..902 1..902 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:24:23 Download gff for MIP03922.complete
Subject Subject Range Query Range Percent Splice Strand
CG33260-RC 1..902 1..902 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:10:02 Download gff for MIP03922.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14760967..14761074 410..517 100 <- Minus
3L 14760520..14760904 518..902 100 <- Minus
3L 14761292..14761552 149..409 100 <- Minus
3L 14761640..14761726 62..148 100 <- Minus
3L 14761784..14761844 1..61 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:10:02 Download gff for MIP03922.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14760967..14761074 410..517 100 <- Minus
3L 14760520..14760904 518..902 100 <- Minus
3L 14761292..14761552 149..409 100 <- Minus
3L 14761640..14761726 62..148 100 <- Minus
3L 14761784..14761844 1..61 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:10:02 Download gff for MIP03922.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14760967..14761074 410..517 100 <- Minus
3L 14760520..14760904 518..902 100 <- Minus
3L 14761292..14761552 149..409 100 <- Minus
3L 14761640..14761726 62..148 100 <- Minus
3L 14761784..14761844 1..61 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:37:42 Download gff for MIP03922.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14753620..14754004 518..902 100 <- Minus
arm_3L 14754067..14754174 410..517 100 <- Minus
arm_3L 14754392..14754652 149..409 100 <- Minus
arm_3L 14754740..14754826 62..148 100 <- Minus
arm_3L 14754884..14754944 1..61 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:35:42 Download gff for MIP03922.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14754884..14754944 1..61 100   Minus
3L 14753620..14754004 518..902 100 <- Minus
3L 14754067..14754174 410..517 100 <- Minus
3L 14754392..14754652 149..409 100 <- Minus
3L 14754740..14754826 62..148 100 <- Minus

MIP03922.hyp Sequence

Translation from 0 to 842

> MIP03922.hyp
IFAKMYLTLLNGTGFVFNVDDYMELRSKHRIMGAPVGTANTKGWSPNQST
LPVELSKFETQLLLDENIAKLVDKSKDLKAKPTAEKLEECKADFESRLLG
QEEALKTEKLRETERYMDKILTGKRKKLLKQGKNELAAALTDKDVLLEMS
VNFKFDRQNALLEVHCEHPTDHSAQIVTGPIVHTNSLKYRVFKDLWRRGK
YVTSGDAFGADFLVYPGDPMIYHASHIVILHEQPVIKPLELIAKVRLSVI
VNKSCVFAYEMENNEEEIHYQTVAWCNLGK*

MIP03922.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:39:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG33260-PC 276 CG33260-PC 1..276 5..280 1435 100 Plus

MIP03922.pep Sequence

Translation from 0 to 842

> MIP03922.pep
IFAKMYLTLLNGTGFVFNVDDYMELRSKHRIMGAPVGTANTKGWSPNQST
LPVELSKFETQLLLDENIAKLVDKSKDLKAKPTAEKLEECKADFESRLLG
QEEALKTEKLRETERYMDKILTGKRKKLLKQGKNELAAALTDKDVLLEMS
VNFKFDRQNALLEVHCEHPTDHSAQIVTGPIVHTNSLKYRVFKDLWRRGK
YVTSGDAFGADFLVYPGDPMIYHASHIVILHEQPVIKPLELIAKVRLSVI
VNKSCVFAYEMENNEEEIHYQTVAWCNLGK*

MIP03922.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:06:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25183-PA 275 GF25183-PA 1..275 5..280 1106 74.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:06:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13711-PA 275 GG13711-PA 1..275 5..280 1302 91.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:06:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16791-PA 239 GH16791-PA 1..239 5..280 798 56.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:04:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG33260-PC 276 CG33260-PC 1..276 5..280 1435 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:06:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13805-PA 275 GI13805-PA 1..275 5..280 969 65.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:06:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26106-PA 366 GL26106-PA 1..110 23..132 420 75.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:06:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23655-PA 256 GA23655-PA 1..253 23..277 931 69.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:06:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24532-PA 276 GM24532-PA 1..276 5..280 1427 96.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:06:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12603-PA 276 GD12603-PA 1..276 5..280 1445 97.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:06:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11671-PA 275 GJ11671-PA 1..275 5..280 996 66.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:06:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10584-PA 257 GK10584-PA 1..257 23..280 733 57.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:06:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20005-PA 275 GE20005-PA 1..275 5..280 1349 91.3 Plus