Clone MIP04152 Report

Search the DGRC for MIP04152

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:41
Well:52
Vector:pOT2
Associated Gene/TranscriptCG34129-RA
Protein status:MIP04152.pep: gold
Sequenced Size:993

Clone Sequence Records

MIP04152.complete Sequence

993 bp assembled on 2009-02-09

GenBank Submission: BT058073.1

> MIP04152.complete
ATAAAATGGGACTCTCGAAGATCTGGCTTCTGGTGAGTTGTCTGCTGTGG
ACCTGCCTGCCCCAGAGCCAGGGAACGGTGTATCCGAGGGACATCCTTCT
AAAGACTCCGAAATTTCGACGCGTCTGGGGCGGGGTGCAGTCCAACACAG
GCCCGAATTTCGGAGGCTGGCTGTTGCGGATCCTGAACGGTGACGGTAAC
TTTGCCTGCGGAGCTGCCTACTATGCCCCTCTGCTCGTGATCACCTCGGC
CAACTGCATCTATCCGTATCGGAACAGCCTTGAAGGTGCCACGGTGGAGG
GCACCGCGTTCTCCGAATGCGATAGGGAGAACTATGCTGATATCGATACG
ATTCAATTTCCCGAGAAATTTATCTACCAGAAACTCTACATGGACGTGGC
AGTAGTGCGTCTAAGGGATCCCGTTAGGGGACGGCTCACTGAGTTCATCC
GTCTTTGCAGCGTCAAAGTGCAGCCCAAAATGCAGATGGTGGTCTTCGGA
TGGGGTTTCGACAATACGGAGGTGGAGATACCCTCATCGGATCCCCGAAA
CGTTACAGTAACTATTATATCCATTAAGGAGTGCCGTCAAAAATTCAAAA
GCCCAAAGATAGCGAGCACATCGATCTGCGCCAGGCAGCCCAAGAATCCG
AAGCAGTGCCTCTACGACGGAGGAAGCCCCCTGATTTACGGAAGAGAGCT
CTGCGGCGTCGTGTCCTTCGGGTCACACTGCATCGACACCTCTAGGCCCG
GCATGTACACCAACATCAGAAGAGTAAAACGATTCATTACTGAAACGGAA
GAATCCATAAATGCCGGTGATGTCTTCAGATCAACTAAAGTAGTGAAAGA
AACAAAGAAACCCCCAAAGAAAACAATCAAACCAAAATCGAAACCAGTAA
AGATACAACGTCTTTTAAGAACTGTAATGGTGGAGCCCTTGGTGTGTTGA
ATGAAATACAAACTAAACTAAGAAAAAAAAAAAAAAAAAAAAA

MIP04152.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:22:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG34129-RA 969 CG34129-RA 1..969 1..969 4845 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:16:20
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 22013270..22014241 972..1 4755 99.3 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:02:50 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:16:19
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26190230..26191205 976..1 4880 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:40:01
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 25931061..25932036 976..1 4880 100 Minus
Blast to na_te.dros performed on 2019-03-15 23:16:19 has no hits.

MIP04152.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:17:14 Download gff for MIP04152.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 22013270..22014241 1..972 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:05:27 Download gff for MIP04152.complete
Subject Subject Range Query Range Percent Splice Strand
CG34129-RA 1..945 6..950 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:34:25 Download gff for MIP04152.complete
Subject Subject Range Query Range Percent Splice Strand
CG34129-RA 1..945 6..950 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:35:51 Download gff for MIP04152.complete
Subject Subject Range Query Range Percent Splice Strand
CG34129-RA 1..945 6..950 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:26:57 Download gff for MIP04152.complete
Subject Subject Range Query Range Percent Splice Strand
CG34129-RA 1..945 6..950 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-02-09 14:52:32 Download gff for MIP04152.complete
Subject Subject Range Query Range Percent Splice Strand
CG34129-RA 1..947 4..950 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:34:25 Download gff for MIP04152.complete
Subject Subject Range Query Range Percent Splice Strand
CG34129-RA 1..947 4..950 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:35:51 Download gff for MIP04152.complete
Subject Subject Range Query Range Percent Splice Strand
CG34129-RA 1..972 1..972 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:26:57 Download gff for MIP04152.complete
Subject Subject Range Query Range Percent Splice Strand
CG34129-RA 1..972 1..972 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:17:14 Download gff for MIP04152.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26190234..26191205 1..972 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:17:14 Download gff for MIP04152.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26190234..26191205 1..972 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:17:14 Download gff for MIP04152.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26190234..26191205 1..972 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:35:51 Download gff for MIP04152.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22015956..22016927 1..972 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:07:46 Download gff for MIP04152.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25931065..25932036 1..972 100   Minus

MIP04152.hyp Sequence

Translation from 2 to 949

> MIP04152.hyp
KMGLSKIWLLVSCLLWTCLPQSQGTVYPRDILLKTPKFRRVWGGVQSNTG
PNFGGWLLRILNGDGNFACGAAYYAPLLVITSANCIYPYRNSLEGATVEG
TAFSECDRENYADIDTIQFPEKFIYQKLYMDVAVVRLRDPVRGRLTEFIR
LCSVKVQPKMQMVVFGWGFDNTEVEIPSSDPRNVTVTIISIKECRQKFKS
PKIASTSICARQPKNPKQCLYDGGSPLIYGRELCGVVSFGSHCIDTSRPG
MYTNIRRVKRFITETEESINAGDVFRSTKVVKETKKPPKKTIKPKSKPVK
IQRLLRTVMVEPLVC*

MIP04152.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:49:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG34129-PA 314 CG34129-PA 1..314 2..315 1668 100 Plus
CG11037-PA 292 CG11037-PA 52..287 31..271 315 33.7 Plus
Sems-PA 275 CG10586-PA 43..265 40..264 299 33.8 Plus
CG34130-PA 297 CG34130-PA 45..263 44..262 287 28.6 Plus
CG10587-PA 276 CG10587-PA 36..268 32..265 280 30.5 Plus

MIP04152.pep Sequence

Translation from 2 to 949

> MIP04152.pep
KMGLSKIWLLVSCLLWTCLPQSQGTVYPRDILLKTPKFRRVWGGVQSNTG
PNFGGWLLRILNGDGNFACGAAYYAPLLVITSANCIYPYRNSLEGATVEG
TAFSECDRENYADIDTIQFPEKFIYQKLYMDVAVVRLRDPVRGRLTEFIR
LCSVKVQPKMQMVVFGWGFDNTEVEIPSSDPRNVTVTIISIKECRQKFKS
PKIASTSICARQPKNPKQCLYDGGSPLIYGRELCGVVSFGSHCIDTSRPG
MYTNIRRVKRFITETEESINAGDVFRSTKVVKETKKPPKKTIKPKSKPVK
IQRLLRTVMVEPLVC*

MIP04152.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:00:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16039-PA 531 GF16039-PA 9..277 7..277 911 61 Plus
Dana\GF18952-PA 571 GF18952-PA 18..300 21..301 735 50 Plus
Dana\GF18952-PA 571 GF18952-PA 295..548 26..277 728 50.8 Plus
Dana\GF16039-PA 531 GF16039-PA 288..525 32..280 363 31.2 Plus
Dana\GF10197-PA 277 GF10197-PA 46..273 40..269 321 32.5 Plus
Dana\GF10198-PA 272 GF10198-PA 44..267 40..265 293 32.2 Plus
Dana\GF10196-PA 263 GF10196-PA 41..263 49..272 283 33.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:00:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11469-PA 314 GG11469-PA 1..314 2..315 1227 73.7 Plus
Dere\GG12195-PA 526 GG12195-PA 1..262 2..262 1129 79 Plus
Dere\GG13273-PA 292 GG13273-PA 52..287 31..271 337 34.8 Plus
Dere\GG13274-PA 273 GG13274-PA 34..266 31..265 310 32.2 Plus
Dere\GG12195-PA 526 GG12195-PA 275..517 44..289 300 27.8 Plus
Dere\GG14278-PA 248 GG14278-PA 42..242 58..262 282 33 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:00:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18182-PA 243 GH18182-PA 6..230 53..276 473 40 Plus
Dgri\GH15252-PA 261 GH15252-PA 53..255 58..262 270 33 Plus
Dgri\GH15562-PA 274 GH15562-PA 29..272 31..271 251 31.9 Plus
Dgri\GH15251-PA 253 GH15251-PA 36..247 58..265 223 26.3 Plus
Dgri\GH15247-PA 255 GH15247-PA 44..249 56..264 200 27.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:47:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG34129-PA 314 CG34129-PA 1..314 2..315 1668 100 Plus
CG11037-PA 292 CG11037-PA 52..287 31..271 315 33.7 Plus
Sems-PA 275 CG10586-PA 43..265 40..264 299 33.8 Plus
CG34130-PA 297 CG34130-PA 45..263 44..262 287 28.6 Plus
CG10587-PA 276 CG10587-PA 36..268 32..265 280 30.5 Plus
CG10587-PC 289 CG10587-PC 36..281 32..265 268 29.3 Plus
CG32271-PA 248 CG32271-PA 46..242 65..262 266 32.2 Plus
CG3650-PA 249 CG3650-PA 25..243 40..262 252 30 Plus
CG4815-PA 265 CG4815-PA 34..259 40..265 237 26.4 Plus
CG17239-PB 248 CG17239-PB 45..248 65..273 209 30 Plus
CG17239-PA 248 CG17239-PA 45..248 65..273 209 30 Plus
CG33160-PA 258 CG33160-PA 58..255 69..267 204 28.5 Plus
CG33159-PA 257 CG33159-PA 43..257 61..271 202 28.3 Plus
CG32270-PA 259 CG32270-PA 52..253 65..264 192 27.8 Plus
CG17571-PB 258 CG17571-PB 53..258 65..269 190 28.3 Plus
CG17571-PA 258 CG17571-PA 53..258 65..269 190 28.3 Plus
CG11836-PF 223 CG11836-PF 7..209 64..262 182 30.6 Plus
CG11836-PE 223 CG11836-PE 7..209 64..262 182 30.6 Plus
CG11836-PG 223 CG11836-PG 7..209 64..262 182 30.6 Plus
CG11836-PC 223 CG11836-PC 7..209 64..262 182 30.6 Plus
CG11836-PA 223 CG11836-PA 7..209 64..262 182 30.6 Plus
CG11836-PB 223 CG11836-PB 7..209 64..262 182 30.6 Plus
iotaTry-PA 252 CG7754-PA 53..252 69..269 177 27.3 Plus
alphaTry-PA 256 CG18444-PA 48..256 61..269 176 25.5 Plus
epsilonTry-PA 256 CG18681-PA 52..256 65..269 175 26.7 Plus
CG14780-PA 302 CG14780-PA 50..270 58..262 174 27.8 Plus
CG10587-PD 225 CG10587-PD 36..200 32..198 172 29.2 Plus
Ser12-PA 245 CG17240-PA 47..245 67..269 171 27.4 Plus
CG3355-PA 314 CG3355-PA 70..299 35..262 170 29 Plus
CG32269-PB 332 CG32269-PB 129..326 65..263 170 23.4 Plus
CG32269-PA 332 CG32269-PA 129..326 65..263 170 23.4 Plus
CG5390-PB 406 CG5390-PB 162..390 56..262 168 26.5 Plus
CG5390-PA 406 CG5390-PA 162..390 56..262 168 26.5 Plus
CG13430-PB 267 CG13430-PB 56..266 68..269 165 27 Plus
CG13430-PA 267 CG13430-PA 56..266 68..269 165 27 Plus
CG32374-PA 299 CG32374-PA 158..292 131..262 163 30.7 Plus
CG6041-PA 308 CG6041-PA 63..277 63..270 162 26.6 Plus
CG4914-PA 374 CG4914-PA 127..362 40..264 162 27.1 Plus
CG32376-PA 291 CG32376-PA 18..279 16..257 161 25.4 Plus
CG16998-PA 258 CG16998-PA 24..253 40..270 158 26 Plus
CG4613-PC 374 CG4613-PC 132..362 36..262 156 28.1 Plus
CG4613-PB 374 CG4613-PB 132..362 36..262 156 28.1 Plus
etaTry-PA 262 CG12386-PA 59..260 69..268 155 25.2 Plus
Ser8-PA 260 CG4812-PA 3..260 9..269 154 23.7 Plus
CG32277-PA 261 CG32277-PA 44..244 61..255 154 26.3 Plus
CG4386-PA 372 CG4386-PA 140..354 56..262 154 25.9 Plus
CG33225-PB 292 CG33225-PB 2..282 1..270 153 25 Plus
CG31265-PA 266 CG31265-PA 36..236 40..243 152 26.7 Plus
CG10405-PB 268 CG10405-PB 62..267 69..264 151 25.6 Plus
thetaTry-PA 262 CG12385-PA 34..262 40..269 149 22.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:00:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16933-PA 276 GI16933-PA 13..259 19..262 401 32.4 Plus
Dmoj\GI16837-PA 287 GI16837-PA 45..281 32..265 285 31.2 Plus
Dmoj\GI11961-PA 263 GI11961-PA 56..257 58..262 276 35.2 Plus
Dmoj\GI11960-PA 250 GI11960-PA 12..246 32..265 229 27.8 Plus
Dmoj\GI11954-PA 218 GI11954-PA 8..212 65..265 196 25.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:00:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22003-PA 295 GL22003-PA 47..263 43..262 303 36.1 Plus
Dper\GL26259-PA 274 GL26259-PA 41..266 38..265 278 30.1 Plus
Dper\GL25243-PA 261 GL25243-PA 55..255 58..262 254 31.1 Plus
Dper\GL25240-PA 263 GL25240-PA 63..258 69..265 217 30.3 Plus
Dper\GL25242-PA 254 GL25242-PA 37..254 58..271 216 28.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:00:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA27342-PA 295 GA27342-PA 47..287 43..295 305 34.9 Plus
Dpse\GA17587-PA 255 GA17587-PA 31..252 40..265 289 31.7 Plus
Dpse\GA10417-PA 274 GA10417-PA 41..266 38..265 278 30.1 Plus
Dpse\GA16803-PA 257 GA16803-PA 55..251 65..262 253 30.7 Plus
Dpse\GA17333-PA 263 GA17333-PA 63..258 69..265 218 30.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:00:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10192-PA 550 GM10192-PA 1..270 2..271 1435 97 Plus
Dsec\GM22176-PA 278 GM22176-PA 7..270 7..269 323 31.2 Plus
Dsec\GM22175-PA 276 GM22175-PA 4..268 9..265 294 30.6 Plus
Dsec\GM10192-PA 550 GM10192-PA 300..518 44..262 287 28.3 Plus
Dsec\GM14071-PA 248 GM14071-PA 46..242 65..262 272 32.7 Plus
Dsec\GM19492-PA 147 GM19492-PA 1..142 128..271 267 39.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:00:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\BG642287-PA 317 GD18143-PA 1..270 2..271 1420 96.3 Plus
Dsim\GD17559-PA 278 GD17559-PA 43..270 40..269 332 33.9 Plus
Dsim\GD12154-PA 292 GD12154-PA 52..287 31..271 329 33.7 Plus
Dsim\GD12153-PA 276 GD12153-PA 4..268 9..265 286 30.3 Plus
Dsim\GD11903-PA 249 GD11903-PA 25..243 40..262 252 30.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:00:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23353-PA 757 GJ23353-PA 20..269 26..274 488 36.8 Plus
Dvir\GJ23353-PA 757 GJ23353-PA 555..757 92..294 400 36.5 Plus
Dvir\GJ23354-PA 376 GJ23354-PA 148..354 43..262 376 35.5 Plus
Dvir\GJ23353-PA 757 GJ23353-PA 409..556 92..239 326 39.2 Plus
Dvir\GJ23353-PA 757 GJ23353-PA 257..410 86..239 321 37.7 Plus
Dvir\GJ12587-PA 284 GJ12587-PA 39..275 31..265 271 31.7 Plus
Dvir\GJ12185-PA 243 GJ12185-PA 36..237 58..262 261 31.6 Plus
Dvir\GJ23354-PA 376 GJ23354-PA 1..92 45..135 233 45.7 Plus
Dvir\GJ12181-PA 253 GJ12181-PA 28..247 40..264 219 28.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:00:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13317-PA 291 GK13317-PA 55..266 44..262 362 34.2 Plus
Dwil\GK13475-PA 251 GK13475-PA 20..249 39..270 323 33.2 Plus
Dwil\GK21642-PA 254 GK21642-PA 30..251 40..265 286 30.5 Plus
Dwil\GK19136-PA 252 GK19136-PA 52..246 67..262 259 31.3 Plus
Dwil\GK19133-PA 263 GK19133-PA 54..245 69..261 219 30.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:00:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10637-PA 540 GE10637-PA 1..285 2..293 1270 80.2 Plus
Dyak\GE23660-PA 298 GE23660-PA 19..294 22..290 655 45.5 Plus
Dyak\GE22728-PA 273 GE22728-PA 43..266 40..265 328 35.4 Plus
Dyak\GE22370-PA 273 GE22370-PA 43..266 40..265 326 35.4 Plus
Dyak\GE22369-PA 292 GE22369-PA 52..287 31..271 315 33.9 Plus
Dyak\GE10637-PA 540 GE10637-PA 288..523 44..279 285 28.8 Plus