Clone MIP04175 Report

Search the DGRC for MIP04175

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:41
Well:75
Vector:pOT2
Associated Gene/TranscriptCG43164-RA
Protein status:MIP04175.pep: gold
Sequenced Size:2387

Clone Sequence Records

MIP04175.complete Sequence

2387 bp assembled on 2011-03-03

GenBank Submission: BT126129.1

> MIP04175.complete
GAAGGCTTGCAGTGAACGCGACGTGAAGTGCTGAACTCTCCAAACTCTAC
GAACTCCAAACACTTCTTCTTTGGAGCCACCTCGATCGCGCGTCCCCAAA
ACGCTGAGAACCCGATTCGTATTCCCCGATCGTCGCCAGTGGCAATTAGA
TAGTGCTCCGCGCTCCCACCAATCCAACCCATTCGAAGCAAAGATGGCCA
AAATCGTACTCTTCTGCCTGCTGAGCCTCTTGGCATGCGCTGCAGGTCAA
CGCATTACGACAATCCACCTGGATGGAGTGCAGTACTTCATCAGCCGAAT
GAATCCCTACTCCCCGGAGCTCAACTACTTCCTGGCCTACCAGTACTGTC
GCTCCCTGGGCCTGCAACTGGCCTCCTTTGAGACGAAGGAGAAGGCCGAG
TCGATGACCACGTATCTGAAGAATGCCGGTTACGGCAACTACGATTTCTG
GACCTCCGGCAATCGCCTGGGCACGGGCATGTTCCTATGGATGAGCACTG
GTCTGCCGTTTAACGCCACTTTTGATTTCTTCGAAAACTCGGCGGACGCC
ATCCAGGCCGGTCTGCTCGATCCCGTCGATCATAATAGCAACACCTCACC
CCAGCGCACCGCTCGCGACAGCAGCAGTGGCGCCGAGAAGGGATGCGTGA
TCCTGAAGCAGCCCACGCTCAAGTGGATGCCCGAGGACTGCTCGGCCGTG
AAGGACTTCATTTGTGAGCAGACCCGCTGCTACTACTACAACTACGGCAG
CATCCCCGTCTCGTCGGCGCAGGGGTAAGGACACTTGACCGCGGAGCCAC
TCCACATAACTCCACCACTCTACACAACCACACGCAAATCGAACAGATAT
TAAGAGCACTGATTGGAGGAGGAACTAAGAATAATGATAATAATGCAATA
AACAAATTATGCTATAATTAACGTTAATTAATTCGCTATACGAGCTGCCC
GCCGGTGGCGCTTAAACAAATGTCCCTAATTAAGTAAAGACAAACGAAAA
CATATTTATACCAGATAAATGTTGATACTAAAAACCCAACCCAGATCAAG
AGATTACGCAAGGATAACGTGATTAAAAACAAGTTACTTTAGTTGACCAT
AAACGAACACACACACACACTTACACTTAGACACACACACACACATTGAC
AAAGTGCGAATCCGATTTCGATTCCCAAAACAGAATTTGCAAAAAGAACG
AACAAATAGACGTCCCATCACCTCCACCACCCCAAGGACTCCTGCCTCCC
TGATGAACCTGCATGTGGCCGCCACCACCACACCCTTGCCCCTGCTGATG
TCCACCAGTGGAGCAATGTACACCGCTGCCAAGGCCAAATCTTCGCCAGC
CGTTGGCCACCGACTGATCGATGATTCCAGCTCCCAGCAGCAACCCTCGT
TTATGTCCTTTAAGCTGAACCATGATCGCTCGCTGCCCGATACGGATTCC
ACTGACGTGGATGTGGAGGATCAGGAAGCGGATTTGGATGGCGAGGAGCA
CGATGACCATGAGGCCGAGGGCGAAGAGGAGCATGACGAGCACGACAACT
TCGAGGAGCATGCCCGTGAGCTGAGCAACGACAACGATGGCGATATCAAG
GAGCACGTATTCCCACTGAGCGACAACGAACTCCACCCCGAGGTGCATTC
GATCGAAGAGGTACAGCAGCAGTTGCAGCAGGAGGATGCGGATGCGGACT
CGGCACCAGCTCCCGCGGCGGCTGAGGATAACGAGAGCTCGCAACACGAT
GCGGAGGCGGATGGAGAGCACGAGCAGGATGGAGCTGAGGGCGAGACTGA
CTTGGAAAATGAGACGCCGGTGGATCTTATCAAGGCCAACGAACCATTGG
CGATGCCCAGCTCCACTGAATCCCCAGCCGCCGCCATCGAGGAGCGCATC
AAGCAGATCGCCCAGGACTTCCAGAAAATGGCCAGCTCCCAGGAGCTGCA
GCCCAAGGAGGAGCTGACCCCCCAATCCTCCCTGTCACTCAACGATCTGA
TACGCACCCTGCGGCCCAACGAACAGCAGATCATTCCGCAGATCGATTCG
GACTACTCCAATGCCATGCGTGTCCTCGGCAAGCCAATGGCGGCCAATAA
CTAGGCATCTCCTTTCCCACGAATGCCACTAGCCTAAGTTGTGTGTGTGT
TTGGGTCGAGGTGTTATCCAGCCGGGCATCCGGGTTCCACTGAGGAATGG
CCATTTTCGAGAGCCGGCCGGACATGTCCGAAAATGACGCTTCTCTCTGA
GGACCTCGATGCCAATGGATGACCGCGCTGAAATGCAGCGAGAGATTAAA
GGAGCTAAGACATTAATCTATATATAAATATATATGTATTGTATGCTTTA
ATTGTATGACAACCACCACAAAAAAAAAAAAAAAAAA

MIP04175.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:19:14
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 13394506..13395668 1207..2369 5605 98.8 Plus
chr2R 21145070 chr2R 13393219..13393810 618..1209 2960 100 Plus
chr2R 21145070 chr2R 13392699..13393076 244..621 1890 100 Plus
chr2R 21145070 chr2R 13389780..13390026 1..247 1235 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:19:12
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17507441..17508611 1207..2377 5855 100 Plus
2R 25286936 2R 17506154..17506745 618..1209 2960 100 Plus
2R 25286936 2R 17505634..17506011 244..621 1890 100 Plus
2R 25286936 2R 17502716..17502962 1..247 1235 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:08:11
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 17508640..17509810 1207..2377 5855 100 Plus
2R 25260384 2R 17507353..17507944 618..1209 2960 100 Plus
2R 25260384 2R 17506833..17507210 244..621 1890 100 Plus
2R 25260384 2R 17503915..17504161 1..247 1235 100 Plus
Blast to na_te.dros performed on 2019-03-16 22:19:12 has no hits.

MIP04175.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:19:48 Download gff for MIP04175.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 13389780..13390024 1..245 100 -> Plus
chr2R 13392701..13393076 246..621 100 -> Plus
chr2R 13393223..13393810 622..1209 93 -> Plus
chr2R 13394509..13395668 1210..2369 98   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-09 09:22:33 Download gff for MIP04175.complete
Subject Subject Range Query Range Percent Splice Strand
CG4844-RB 1..852 1253..2104 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:54:24 Download gff for MIP04175.complete
Subject Subject Range Query Range Percent Splice Strand
CG43164-RC 1..580 194..773 100 == Plus
CG43164-RC 581..1476 1209..2104 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:26:50 Download gff for MIP04175.complete
Subject Subject Range Query Range Percent Splice Strand
CG43164-RC 1..580 194..773 100 == Plus
CG43164-RC 581..1476 1209..2104 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-09 09:22:32 Download gff for MIP04175.complete
Subject Subject Range Query Range Percent Splice Strand
CG18431-RA 1..2357 13..2369 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:54:24 Download gff for MIP04175.complete
Subject Subject Range Query Range Percent Splice Strand
CG43164-RA 40..2408 1..2369 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:26:50 Download gff for MIP04175.complete
Subject Subject Range Query Range Percent Splice Strand
CG43164-RA 40..2408 1..2369 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:19:48 Download gff for MIP04175.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17502716..17502960 1..245 100 -> Plus
2R 17505636..17506011 246..621 100 -> Plus
2R 17506158..17506745 622..1209 100 -> Plus
2R 17507444..17508603 1210..2369 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:19:48 Download gff for MIP04175.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17502716..17502960 1..245 100 -> Plus
2R 17505636..17506011 246..621 100 -> Plus
2R 17506158..17506745 622..1209 100 -> Plus
2R 17507444..17508603 1210..2369 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:19:48 Download gff for MIP04175.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17502716..17502960 1..245 100 -> Plus
2R 17505636..17506011 246..621 100 -> Plus
2R 17506158..17506745 622..1209 100 -> Plus
2R 17507444..17508603 1210..2369 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:54:24 Download gff for MIP04175.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13393663..13394250 622..1209 100 -> Plus
arm_2R 13390221..13390465 1..245 100 -> Plus
arm_2R 13393141..13393516 246..621 100 -> Plus
arm_2R 13394949..13396108 1210..2369 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:00:30 Download gff for MIP04175.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17503915..17504159 1..245 100 -> Plus
2R 17506835..17507210 246..621 100 -> Plus
2R 17507357..17507944 622..1209 100 -> Plus
2R 17508643..17509802 1210..2369 100   Plus

MIP04175.pep Sequence

Translation from 193 to 777

> MIP04175.pep
MAKIVLFCLLSLLACAAGQRITTIHLDGVQYFISRMNPYSPELNYFLAYQ
YCRSLGLQLASFETKEKAESMTTYLKNAGYGNYDFWTSGNRLGTGMFLWM
STGLPFNATFDFFENSADAIQAGLLDPVDHNSNTSPQRTARDSSSGAEKG
CVILKQPTLKWMPEDCSAVKDFICEQTRCYYYNYGSIPVSSAQG*

MIP04175.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:59:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13130-PA 194 GF13130-PA 1..194 1..194 1042 99.5 Plus
Dana\GF24446-PA 386 GF24446-PA 269..382 44..175 149 30.9 Plus
Dana\GF21734-PA 194 GF21734-PA 62..135 31..106 142 42.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:59:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20688-PA 194 GG20688-PA 1..194 1..194 1043 99.5 Plus
Dere\GG14773-PA 376 GG14773-PA 259..372 44..175 147 30.9 Plus
Dere\GG19039-PA 188 GG19039-PA 56..128 31..105 146 44.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 17:59:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21408-PA 194 GH21408-PA 1..194 1..194 1044 99 Plus
Dgri\GH15445-PA 407 GH15445-PA 290..403 44..175 144 30.1 Plus
Dgri\GH24460-PA 195 GH24460-PA 63..136 31..106 143 42.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:19:49
Subject Length Description Subject Range Query Range Score Percent Strand
nw-PD 194 CG43164-PD 1..194 1..194 1039 100 Plus
nw-PA 194 CG18431-PA 1..194 1..194 1039 100 Plus
nw-PC 491 CG43164-PC 1..194 1..194 1039 100 Plus
nw-PB 193 CG18431-PB 1..193 1..194 1023 99.5 Plus
nw-PE 490 CG43164-PE 1..193 1..194 1023 99.5 Plus
CG12111-PB 188 CG12111-PB 56..128 31..105 150 45.5 Plus
CG12111-PA 188 CG12111-PA 56..128 31..105 150 45.5 Plus
tfc-PC 188 CG9134-PC 71..184 44..175 148 30.9 Plus
tfc-PA 188 CG9134-PA 71..184 44..175 148 30.9 Plus
tfc-PB 376 CG9134-PB 259..372 44..175 148 30.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 17:59:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21025-PA 251 GI21025-PA 201..251 144..194 284 100 Plus
Dmoj\GI14792-PA 194 GI14792-PA 62..134 31..105 150 44.2 Plus
Dmoj\GI13046-PA 379 GI13046-PA 262..375 44..175 144 30.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 17:59:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11431-PA 194 GL11431-PA 1..194 1..194 1044 99 Plus
Dper\GL21206-PA 186 GL21206-PA 44..123 24..108 148 41.4 Plus
Dper\GL14647-PA 194 GL14647-PA 62..134 31..105 148 45.5 Plus
Dper\GL16169-PA 214 GL16169-PA 77..143 44..109 140 40.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:59:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24725-PA 194 GA24725-PA 1..194 1..194 1044 99 Plus
Dpse\GA22161-PA 186 GA22161-PA 44..123 24..108 148 41.4 Plus
Dpse\GA11405-PA 194 GA11405-PA 62..134 31..105 148 45.5 Plus
Dpse\GA21567-PA 381 GA21567-PA 264..377 44..175 146 30.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:59:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21785-PA 194 GM21785-PA 1..194 1..194 1048 100 Plus
Dsec\GM14393-PA 375 GM14393-PA 258..371 44..175 148 30.9 Plus
Dsec\GM10799-PA 184 GM10799-PA 57..122 42..107 143 43.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:59:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11276-PA 194 GD11276-PA 1..194 1..194 1048 100 Plus
Dsim\GD24567-PA 188 GD24567-PA 56..128 31..105 150 45.5 Plus
Dsim\GD13601-PA 375 GD13601-PA 258..371 44..175 148 30.9 Plus
Dsim\GD19773-PA 184 GD19773-PA 57..122 42..107 142 43.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 17:59:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21952-PA 194 GJ21952-PA 1..194 1..194 1044 99 Plus
Dvir\GJ19459-PA 194 GJ19459-PA 55..134 24..105 154 42.9 Plus
Dvir\GJ12142-PA 412 GJ12142-PA 295..408 44..175 145 30.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 17:59:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22906-PA 194 GK22906-PA 1..194 1..194 1047 99.5 Plus
Dwil\GK21163-PA 190 GK21163-PA 73..186 44..175 147 30.9 Plus
Dwil\GK23834-PA 184 GK23834-PA 59..119 43..103 139 46.8 Plus
Dwil\GK25689-PA 196 GK25689-PA 57..137 24..106 139 40 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:59:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11672-PA 194 GE11672-PA 1..194 1..194 1048 100 Plus
Dyak\GE17444-PA 188 GE17444-PA 56..128 31..105 152 45.5 Plus
Dyak\GE21136-PA 379 GE21136-PA 262..375 44..175 148 30.9 Plus

MIP04175.hyp Sequence

Translation from 1252 to 2103

> MIP04175.hyp
MNLHVAATTTPLPLLMSTSGAMYTAAKAKSSPAVGHRLIDDSSSQQQPSF
MSFKLNHDRSLPDTDSTDVDVEDQEADLDGEEHDDHEAEGEEEHDEHDNF
EEHARELSNDNDGDIKEHVFPLSDNELHPEVHSIEEVQQQLQQEDADADS
APAPAAAEDNESSQHDAEADGEHEQDGAEGETDLENETPVDLIKANEPLA
MPSSTESPAAAIEERIKQIAQDFQKMASSQELQPKEELTPQSSLSLNDLI
RTLRPNEQQIIPQIDSDYSNAMRVLGKPMAANN*

MIP04175.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:03:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG43164-PE 490 CG43164-PE 208..490 1..283 1454 100 Plus
CG43164-PC 491 CG43164-PC 209..491 1..283 1454 100 Plus