Clone Sequence Records
MIP04239.complete Sequence
853 bp assembled on 2009-02-05
GenBank Submission: BT058075.1
> MIP04239.complete
AGAAGCCGCTGAAAAACCTAAGAATATTGAAAATCAACATGAATAATGGG
AATATAAAACGCCTTCAAAAGAAACTCAGCGTTTCGAAAAAGCCAGCAGT
CACTGTGGATTCACCATTGGCAAAGTATGACTCCTCGGGCATCTTGACCT
GCATTATTTGCAGGATTCCTATCAAACCCAACGTCTGGAAGGTGCATATA
AATTCCAAGCAGCACAAACTGAACGTCGATCAGGCTAAGCAGAATAAGGT
GGAGAAACCCGTCACCACTACTGCACCCAAGGATCCTACGGGTCCGTCCA
CCAAGACTTCAGCTCCTGCCAAAAACTCCAGCACACTGCCAGATAAAACT
CCACAGAGCAGCCAGGAAAAGCATCCTCCCCTCATTCAAGAGAAAACTGC
CCAGGGAAATGCGAGCAGCAAGCCTGAGAATGAAACTACTGTCGAGAAAC
TGCCAGAAAAGTTCTTCGACGAGGATAAGACCAATAAATCGGAGGCCGCT
CGCCTTCAGGACGAGGAATGGCAGCGATTCCAGCAGGAGATCAAGCGGGC
GGACACGGAATCCAGTGAAATTGTGGCCGACGAGCAGGAGGACATCAATC
TCAAGCGACACATCAAGGAGATCGACGAGCAGATCGACAACTGGAAGAGA
TTTATTAAAATTAACGATCAGAAAAAAGTACTCCTTAGTAAAAAGCGAAG
AGTAGACCCCAAGATGGAGGTCGATCCGGAATTGAGTTCAAGCGAAGAAG
ATTGCAGTGTGGATGATTTGTTCGACTGGAGAACGAAAAATCTGCATAGC
TAGAGAATAAATATGGTATTAAAATGTTACTGTTATAAAAAAAAAAAAAA
AAA
MIP04239.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:22:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11839.a | 978 | CG11839.a | 121..967 | 1..847 | 4205 | 99.7 | Plus |
CG11839-RA | 768 | CG11839-RA | 90..768 | 125..803 | 3395 | 100 | Plus |
CG11839-RA | 768 | CG11839-RA | 1..60 | 39..98 | 300 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:40:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 20893375..20894086 | 125..836 | 3425 | 98.7 | Plus |
chr3R | 27901430 | chr3R | 20893099..20893226 | 1..128 | 625 | 99.2 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:02:59 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:40:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 25070203..25070925 | 125..847 | 3585 | 99.7 | Plus |
3R | 32079331 | 3R | 25069927..25070054 | 1..128 | 625 | 99.2 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:39:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 24811034..24811756 | 125..847 | 3585 | 99.7 | Plus |
3R | 31820162 | 3R | 24810758..24810885 | 1..128 | 625 | 99.2 | Plus |
Blast to na_te.dros performed on 2019-03-15 23:40:19 has no hits.
MIP04239.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:40:58 Download gff for
MIP04239.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 20893099..20893222 | 1..124 | 100 | <- | Plus |
chr3R | 20893375..20894086 | 125..836 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:05:13 Download gff for
MIP04239.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11839-RA | 1..768 | 39..803 | 97 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:34:05 Download gff for
MIP04239.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11839-RB | 1..765 | 39..803 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:30:32 Download gff for
MIP04239.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11839-RB | 1..765 | 39..803 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:45:25 Download gff for
MIP04239.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11839-RB | 1..765 | 39..803 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-02-05 16:40:03 Download gff for
MIP04239.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11839-RA | 1..768 | 39..803 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:34:05 Download gff for
MIP04239.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11839-RB | 1..836 | 1..836 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:30:32 Download gff for
MIP04239.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11839-RB | 1..836 | 1..836 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:45:25 Download gff for
MIP04239.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11839-RB | 1..836 | 1..836 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:40:58 Download gff for
MIP04239.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25069927..25070050 | 1..124 | 100 | <- | Plus |
3R | 25070203..25070914 | 125..836 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:40:58 Download gff for
MIP04239.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25069927..25070050 | 1..124 | 100 | <- | Plus |
3R | 25070203..25070914 | 125..836 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:40:58 Download gff for
MIP04239.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25069927..25070050 | 1..124 | 100 | <- | Plus |
3R | 25070203..25070914 | 125..836 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:30:32 Download gff for
MIP04239.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 20895649..20895772 | 1..124 | 100 | <- | Plus |
arm_3R | 20895925..20896636 | 125..836 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:07:24 Download gff for
MIP04239.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24811034..24811745 | 125..836 | 100 | | Plus |
3R | 24810758..24810881 | 1..124 | 100 | <- | Plus |
MIP04239.hyp Sequence
Translation from 2 to 802
> MIP04239.hyp
KPLKNLRILKINMNNGNIKRLQKKLSVSKKPAVTVDSPLAKYDSSGILTC
IICRIPIKPNVWKVHINSKQHKLNVDQAKQNKVEKPVTTTAPKDPTGPST
KTSAPAKNSSTLPDKTPQSSQEKHPPLIQEKTAQGNASSKPENETTVEKL
PEKFFDEDKTNKSEAARLQDEEWQRFQQEIKRADTESSEIVADEQEDINL
KRHIKEIDEQIDNWKRFIKINDQKKVLLSKKRRVDPKMEVDPELSSSEED
CSVDDLFDWRTKNLHS*
MIP04239.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:27:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11839-PB | 254 | CG11839-PB | 1..254 | 13..266 | 1321 | 100 | Plus |
MIP04239.pep Sequence
Translation from 2 to 802
> MIP04239.pep
KPLKNLRILKINMNNGNIKRLQKKLSVSKKPAVTVDSPLAKYDSSGILTC
IICRIPIKPNVWKVHINSKQHKLNVDQAKQNKVEKPVTTTAPKDPTGPST
KTSAPAKNSSTLPDKTPQSSQEKHPPLIQEKTAQGNASSKPENETTVEKL
PEKFFDEDKTNKSEAARLQDEEWQRFQQEIKRADTESSEIVADEQEDINL
KRHIKEIDEQIDNWKRFIKINDQKKVLLSKKRRVDPKMEVDPELSSSEED
CSVDDLFDWRTKNLHS*
MIP04239.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 16:39:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF17885-PA | 257 | GF17885-PA | 1..257 | 13..266 | 824 | 66.2 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 16:39:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG11356-PA | 257 | GG11356-PA | 1..256 | 13..265 | 1093 | 86.7 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 16:39:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH19584-PA | 232 | GH19584-PA | 15..231 | 42..265 | 473 | 44.9 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:57:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11839-PB | 254 | CG11839-PB | 1..254 | 13..266 | 1321 | 100 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 16:39:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL20509-PA | 199 | GL20509-PA | 2..199 | 42..266 | 518 | 52.7 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 16:39:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA11226-PA | 199 | GA11226-PA | 2..199 | 42..266 | 515 | 52.7 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 16:39:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM17796-PA | 243 | GM17796-PA | 1..226 | 13..237 | 1019 | 88.1 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 16:39:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD21168-PA | 255 | GD21168-PA | 1..255 | 13..266 | 1146 | 89.8 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 16:39:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK13881-PA | 220 | GK13881-PA | 2..219 | 42..265 | 454 | 48 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 16:39:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE23553-PA | 248 | GE23553-PA | 1..247 | 13..265 | 1148 | 88.5 | Plus |