Clone MIP04419 Report

Search the DGRC for MIP04419

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:44
Well:19
Vector:pOT2
Associated Gene/TranscriptCG10749-RA
Protein status:MIP04419.pep: gold
Sequenced Size:1184

Clone Sequence Records

MIP04419.complete Sequence

1184 bp assembled on 2009-04-03

GenBank Submission: BT081390.1

> MIP04419.complete
CCCACTTGAAATTTTAACATTTTAAAAAAAAAATTATAAAATGTTTTTGG
CCTCTAGATTGTTAAGCCATGTTGGCAACTTGCCTCCCAAGGTCCAGCAG
CTTGGATATATCAACCGAGGTCTCAAGGTCGCCGTTGTGGGATCGGTGGG
TGGAATCGGTCAGCCGCTGTCCCTTCTTCTCAAGCATAATCCGCAAATCT
CGACCCTGTCTCTGTACGACATTAAGAATACAACCGGTGTAGGAGTAGAC
TTATCTCATATCAACACCCGTGCTTCAGTGTGCCCATTCGAGGGTAAGAA
TGGTTTAAAAAAAGCTATGGATAAGGCTGATATAGTGGTGATACCGGCGG
GTTTGCCACGTAAGCCCGGAATGAAGCGCGAAGATTTGGTGGACGTGAAT
GCCAGCGTTGCCTGCGAAGTGGCTTTTGCGGCTAGCGAAGTTTGTCCCGG
TGCCATGCTTGCCTTCATCACGAACCCCATCAACGTGATAGTACCCATCG
TGGCCACGATCCTTAAAGCAAAGGGTACATACGATCCGAATCGACTATTT
GGTGTCACCACTCTGGATGTGGTACGAGCCCAGACCTTTGTAGCGGACAT
TCTCAACGTTGATCCCCAGAAAGTGAATATACCCGTAATCGGTGGCCATA
CAGGTCGGACCATCCTGCCCATACTGTCGCAGTGTGATCCCCCCTTTAAG
GGTACCGATAAGGAGCGCGAAGCGTTGATCCAACGCATCCAAAATGCGGG
CACAGAAGTGGTTAATGCCAAGGATGGCCTGGGCTCGGCCACCCTATCGA
TGGCCTTTGCAGCCACTCAGTTTGTAAGCTCGTTGATAAAGGGTATCAAG
GGTTCAAAGGACGAGTGCATTGTGGAATGTGCCTATGTGGAGTCTGATGT
CACGGAGGCCCAGTTCTTCGCCACCCCACTGATACTGGGACCCCAGGGTG
TCAAGGAAAACACAGGATTGCCCGATTTGGACGATGAGGAAAGGAAGGCT
CTAAATGGTATGCTACCCATTTTGAAGGAGAGTATCGCAAAGGGCATCAA
ATTGGGCGAGGGTATGATATGCAGTTGTGCATAACAATGGAGATACAATT
TACATAAACATATTATTCCGATTTTGGTTTTCTTAATAAATTATTAGGTT
ATTTTGTTAAAATAAAAAAAAAAAAAAAAAAAAA

MIP04419.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:29:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG10749-RA 1181 CG10749-RA 13..1176 1..1164 5820 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 21:10:18
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 12962842..12964004 1..1163 5755 99.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:03:20 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 21:10:16
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12972486..12973649 1..1164 5820 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:45:32
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 12965586..12966749 1..1164 5820 100 Plus
Blast to na_te.dros performed on 2019-03-15 21:10:16 has no hits.

MIP04419.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 21:10:59 Download gff for MIP04419.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 12962882..12964004 41..1163 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:08:31 Download gff for MIP04419.complete
Subject Subject Range Query Range Percent Splice Strand
CG10749-RA 1..1044 41..1084 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:43:11 Download gff for MIP04419.complete
Subject Subject Range Query Range Percent Splice Strand
CG10749-RA 1..1044 41..1084 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:39:47 Download gff for MIP04419.complete
Subject Subject Range Query Range Percent Splice Strand
CG10749-RA 1..1044 41..1084 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:45:39 Download gff for MIP04419.complete
Subject Subject Range Query Range Percent Splice Strand
CG10749-RA 1..1044 41..1084 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-04-03 15:47:17 Download gff for MIP04419.complete
Subject Subject Range Query Range Percent Splice Strand
CG10749-RA 13..1175 1..1163 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:43:11 Download gff for MIP04419.complete
Subject Subject Range Query Range Percent Splice Strand
CG10749-RA 13..1175 1..1163 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:39:47 Download gff for MIP04419.complete
Subject Subject Range Query Range Percent Splice Strand
CG10749-RA 13..1175 1..1163 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:45:39 Download gff for MIP04419.complete
Subject Subject Range Query Range Percent Splice Strand
CG10749-RA 13..1175 1..1163 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:10:59 Download gff for MIP04419.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12972486..12973648 1..1163 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:10:59 Download gff for MIP04419.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12972486..12973648 1..1163 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:10:59 Download gff for MIP04419.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12972486..12973648 1..1163 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:39:47 Download gff for MIP04419.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 12965586..12966748 1..1163 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:18:07 Download gff for MIP04419.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12965586..12966748 1..1163 100   Plus

MIP04419.pep Sequence

Translation from 40 to 1083

> MIP04419.pep
MFLASRLLSHVGNLPPKVQQLGYINRGLKVAVVGSVGGIGQPLSLLLKHN
PQISTLSLYDIKNTTGVGVDLSHINTRASVCPFEGKNGLKKAMDKADIVV
IPAGLPRKPGMKREDLVDVNASVACEVAFAASEVCPGAMLAFITNPINVI
VPIVATILKAKGTYDPNRLFGVTTLDVVRAQTFVADILNVDPQKVNIPVI
GGHTGRTILPILSQCDPPFKGTDKEREALIQRIQNAGTEVVNAKDGLGSA
TLSMAFAATQFVSSLIKGIKGSKDECIVECAYVESDVTEAQFFATPLILG
PQGVKENTGLPDLDDEERKALNGMLPILKESIAKGIKLGEGMICSCA*

MIP04419.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:58:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23749-PA 356 GF23749-PA 20..348 19..340 1065 64.4 Plus
Dana\GF23071-PA 336 GF23071-PA 26..331 29..336 912 56.8 Plus
Dana\GF10673-PA 353 GF10673-PA 1..331 1..336 845 51.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:58:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15612-PA 347 GG15612-PA 1..346 1..346 1600 87.6 Plus
Dere\GG22759-PA 336 GG22759-PA 26..333 29..338 918 57.4 Plus
Dere\GG13791-PA 353 GG13791-PA 1..337 1..344 836 50.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:58:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21422-PA 331 GH21422-PA 31..328 39..338 913 59.3 Plus
Dgri\GH18558-PA 336 GH18558-PA 26..333 29..338 910 56.1 Plus
Dgri\GH21421-PA 367 GH21421-PA 25..338 22..337 907 56.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:44:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG10749-PA 347 CG10749-PA 1..347 1..347 1762 100 Plus
Mdh2-PA 336 CG7998-PA 26..331 29..336 898 57.5 Plus
CG10748-PA 349 CG10748-PA 17..333 22..340 831 52 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:58:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18598-PA 338 GI18598-PA 1..335 2..338 984 55.5 Plus
Dmoj\GI24757-PA 336 GI24757-PA 26..333 29..338 918 56.8 Plus
Dmoj\GI18597-PA 382 GI18597-PA 31..352 22..343 917 55.6 Plus
Dmoj\GI14636-PA 322 GI14636-PA 6..315 25..336 846 52.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:58:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25264-PA 354 GL25264-PA 31..350 25..343 1035 62.8 Plus
Dper\GL12005-PA 336 GL12005-PA 25..331 28..336 931 57.9 Plus
Dper\GL10476-PA 383 GL10476-PA 20..302 25..310 819 57 Plus
Dper\GL24873-PA 344 GL24873-PA 19..282 41..306 645 48 Plus
Dper\GL16414-PA 240 GL16414-PA 1..237 100..338 621 50.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:58:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10541-PA 354 GA10541-PA 31..350 25..343 1040 63.1 Plus
Dpse\GA20754-PA 336 GA20754-PA 25..331 28..336 931 57.9 Plus
Dpse\GA24380-PA 350 GA24380-PA 20..328 25..336 900 57.4 Plus
Dpse\GA22565-PA 346 GA22565-PA 32..343 25..338 822 51.3 Plus
Dpse\GA22564-PA 343 GA22564-PA 30..343 25..340 815 52.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:58:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25384-PA 347 GM25384-PA 1..347 1..347 1718 95.1 Plus
Dsec\GM15290-PA 336 GM15290-PA 26..333 29..338 915 57.1 Plus
Dsec\GM24618-PA 349 GM24618-PA 21..336 26..343 816 52.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:58:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14416-PA 255 GD14416-PA 1..255 93..347 1254 94.5 Plus
Dsim\GD19217-PA 329 GD19217-PA 26..326 29..338 885 56.9 Plus
Dsim\GD12684-PA 349 GD12684-PA 21..336 26..343 814 52.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:58:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20394-PA 341 GJ20394-PA 26..340 24..340 976 57.7 Plus
Dvir\GJ20393-PA 380 GJ20393-PA 36..353 26..343 922 56.2 Plus
Dvir\GJ22544-PA 336 GJ22544-PA 26..331 29..336 921 57.5 Plus
Dvir\GJ19287-PA 317 GJ19287-PA 6..314 26..336 838 52.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:58:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22135-PA 343 GK22135-PA 22..341 26..345 996 59.7 Plus
Dwil\GK22386-PA 336 GK22386-PA 26..331 29..336 918 57.1 Plus
Dwil\GK19917-PA 340 GK19917-PA 27..336 26..337 865 56.4 Plus
Dwil\GK22161-PA 346 GK22161-PA 1..329 1..335 853 52.2 Plus
Dwil\GK22134-PA 123 GK22134-PA 16..106 251..343 162 36.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:58:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21938-PA 347 GE21938-PA 1..346 1..346 1633 89.6 Plus
Dyak\GE25523-PA 336 GE25523-PA 26..333 29..338 919 57.4 Plus
Dyak\GE20084-PA 349 GE20084-PA 12..336 17..343 810 52 Plus

MIP04419.hyp Sequence

Translation from 40 to 1083

> MIP04419.hyp
MFLASRLLSHVGNLPPKVQQLGYINRGLKVAVVGSVGGIGQPLSLLLKHN
PQISTLSLYDIKNTTGVGVDLSHINTRASVCPFEGKNGLKKAMDKADIVV
IPAGLPRKPGMKREDLVDVNASVACEVAFAASEVCPGAMLAFITNPINVI
VPIVATILKAKGTYDPNRLFGVTTLDVVRAQTFVADILNVDPQKVNIPVI
GGHTGRTILPILSQCDPPFKGTDKEREALIQRIQNAGTEVVNAKDGLGSA
TLSMAFAATQFVSSLIKGIKGSKDECIVECAYVESDVTEAQFFATPLILG
PQGVKENTGLPDLDDEERKALNGMLPILKESIAKGIKLGEGMICSCA*

MIP04419.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:13:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG10749-PA 347 CG10749-PA 1..347 1..347 1762 100 Plus
Mdh2-PA 336 CG7998-PA 26..331 29..336 898 57.5 Plus
CG10748-PA 349 CG10748-PA 17..333 22..340 831 52 Plus