Clone MIP04495 Report

Search the DGRC for MIP04495

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:44
Well:95
Vector:pOT2
Associated Gene/TranscriptCG14106-RA
Protein status:MIP04495.pep: gold
Sequenced Size:1118

Clone Sequence Records

MIP04495.complete Sequence

1118 bp assembled on 2009-04-09

GenBank Submission: BT082035.1

> MIP04495.complete
AAACAATAACCGACGTTCTTTGTTTTTATATTTGTTTCTTTTTCTTTTTC
ATCTCTTGTTTTGTTCGATTCTCGTGGCCATGAAACGGGCTTCGATGGGC
ACATCACGCAACTTTCTCCGCGAGAACCGGATGATGGTGAGCCAGGCGTC
TCCAAACTACCAGATGCCCACCGCCTCGTCCATGGCCAGATGCTGCGGAC
CAGTGAGGTTACTTTTGGCCGCTACTCAGAGGGGCTTGAATGGCGGAACA
GGGCCAAAAGTTGTTCCCAGTCAACGGAAGCTATCCGAGAAGCAGATTCA
AACGGAGGACATCAGCGATGAGCGGTTTCTCAGTGCCGCCCTGCTCAAGT
GCTCGGAGAAGACTCATACCCACTTGCAATCCCGCAGCGAGGGCGACGAT
CCTGCGGACGGCAGGGGAGGACAGTTTCTGGACGAAAGGCTACGACTGCG
ACGGACTGCGTCCAATTTTGAGTTGGGCAAAATGCCGGAACAACGCGATG
GCTATCAGCCGGGGCAATGCACAATGCACCGGCCGTTAGCTAACACGTTC
GGCATTTTGCCCGGCGGTTTAAATTACCTGGACAATTGTGTCTCTTCCAG
CCGAAAACAGGATGATGAGGCATCGATCTGCTCGCAATCCATCAAGGCAA
GTTCTCCAAGGGTCCGCCAAATGGACATTCCCGAGGTGGTGGATGTTAAC
CCAGACGATATACTAAGCTTACACTCGCAAGAGTCCTGTGCAGAGCTACC
AGTTGTAGAGGTCCAGCGGAATGAAGCGGAAGTCCAACTACCGGAGAATT
CTCAAACGGATTCACCTGAGGAATCCCAACCTATTCTGCTAACCAGTGAG
CAGAGAATGGTGCTAATGGATGCCGTCCGTAAGCGGCAAAATCAATTGAT
TGCGGAATACAACCGATTGCCACTTACCGTGGGCACATTGCGAGTCCGGA
ATCTCAAGAGACAACTGGAGCAGCAATTGGATGTGTTGGACTACGATCTC
AGCAGGCTATCACTGACGAATGTGTATTTGAAGCCAGAGTCACAATTTGG
AACAATCGCTTATCAAAAATTGCCAACAAATATAAATGCTTAGCTAAAAC
GAAAAAAAAAAAAAAAAA

MIP04495.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:30:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG14106-RA 1102 CG14106-RA 1..1102 1..1102 5510 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:23:20
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 13414818..13415918 1101..1 5475 99.8 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:03:30 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:23:18
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 13424569..13425671 1103..1 5515 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:46:42
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 13417669..13418771 1103..1 5515 100 Minus
Blast to na_te.dros performed on 2019-03-16 18:23:18 has no hits.

MIP04495.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:24:25 Download gff for MIP04495.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 13414818..13415918 1..1101 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:09:21 Download gff for MIP04495.complete
Subject Subject Range Query Range Percent Splice Strand
CG14106-RA 1..1014 80..1093 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:45:05 Download gff for MIP04495.complete
Subject Subject Range Query Range Percent Splice Strand
CG14106-RA 1..1014 80..1093 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:18:56 Download gff for MIP04495.complete
Subject Subject Range Query Range Percent Splice Strand
CG14106-RA 1..1014 80..1093 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:38:39 Download gff for MIP04495.complete
Subject Subject Range Query Range Percent Splice Strand
CG14106-RA 1..1014 80..1093 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-04-10 11:30:01 Download gff for MIP04495.complete
Subject Subject Range Query Range Percent Splice Strand
CG14106-RA 1..1098 4..1101 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:45:05 Download gff for MIP04495.complete
Subject Subject Range Query Range Percent Splice Strand
CG14106-RA 1..1101 1..1101 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:18:56 Download gff for MIP04495.complete
Subject Subject Range Query Range Percent Splice Strand
CG14106-RA 1..1101 1..1101 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:38:39 Download gff for MIP04495.complete
Subject Subject Range Query Range Percent Splice Strand
CG14106-RA 1..1101 1..1101 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:24:25 Download gff for MIP04495.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13424571..13425671 1..1101 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:24:25 Download gff for MIP04495.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13424571..13425671 1..1101 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:24:25 Download gff for MIP04495.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13424571..13425671 1..1101 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:18:56 Download gff for MIP04495.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 13417671..13418771 1..1101 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:20:19 Download gff for MIP04495.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13417671..13418771 1..1101 100   Minus

MIP04495.hyp Sequence

Translation from 0 to 1092

> MIP04495.hyp
NNNRRSLFLYLFLFLFHLLFCSILVAMKRASMGTSRNFLRENRMMVSQAS
PNYQMPTASSMARCCGPVRLLLAATQRGLNGGTGPKVVPSQRKLSEKQIQ
TEDISDERFLSAALLKCSEKTHTHLQSRSEGDDPADGRGGQFLDERLRLR
RTASNFELGKMPEQRDGYQPGQCTMHRPLANTFGILPGGLNYLDNCVSSS
RKQDDEASICSQSIKASSPRVRQMDIPEVVDVNPDDILSLHSQESCAELP
VVEVQRNEAEVQLPENSQTDSPEESQPILLTSEQRMVLMDAVRKRQNQLI
AEYNRLPLTVGTLRVRNLKRQLEQQLDVLDYDLSRLSLTNVYLKPESQFG
TIAYQKLPTNINA*

MIP04495.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:52:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG14106-PA 337 CG14106-PA 1..337 27..363 1720 100 Plus

MIP04495.pep Sequence

Translation from 1 to 1092

> MIP04495.pep
NNNRRSLFLYLFLFLFHLLFCSILVAMKRASMGTSRNFLRENRMMVSQAS
PNYQMPTASSMARCCGPVRLLLAATQRGLNGGTGPKVVPSQRKLSEKQIQ
TEDISDERFLSAALLKCSEKTHTHLQSRSEGDDPADGRGGQFLDERLRLR
RTASNFELGKMPEQRDGYQPGQCTMHRPLANTFGILPGGLNYLDNCVSSS
RKQDDEASICSQSIKASSPRVRQMDIPEVVDVNPDDILSLHSQESCAELP
VVEVQRNEAEVQLPENSQTDSPEESQPILLTSEQRMVLMDAVRKRQNQLI
AEYNRLPLTVGTLRVRNLKRQLEQQLDVLDYDLSRLSLTNVYLKPESQFG
TIAYQKLPTNINA*

MIP04495.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 16:24:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19513-PA 321 GF19513-PA 23..318 50..343 593 50.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 16:24:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13770-PA 337 GG13770-PA 1..337 27..363 1497 86.4 Plus
Dere\GG23280-PA 388 GG23280-PA 159..380 99..343 159 28.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 16:24:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24498-PA 306 GH24498-PA 8..291 36..338 305 33.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:54:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG14106-PA 337 CG14106-PA 1..337 27..363 1720 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 16:24:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15285-PA 343 GI15285-PA 4..331 27..344 504 43.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 16:24:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15124-PA 307 GL15124-PA 1..294 55..337 458 44.2 Plus
Dper\GL10503-PA 380 GL10503-PA 148..380 90..355 156 24.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 16:24:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22771-PA 350 GA22771-PA 8..337 34..337 500 43.4 Plus
Dpse\GA10774-PA 382 GA10774-PA 150..382 90..355 150 24.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 16:24:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24594-PA 330 GM24594-PA 1..330 27..363 1603 91.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 16:24:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12663-PA 334 GD12663-PA 1..334 27..363 1656 94.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 16:24:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16940-PA 376 GJ16940-PA 1..364 25..344 474 38.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 16:24:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25741-PA 360 GK25741-PA 13..360 24..344 445 37.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 16:24:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20065-PA 337 GE20065-PA 1..337 27..363 1532 84.9 Plus