Clone MIP04527 Report

Search the DGRC for MIP04527

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:45
Well:27
Vector:pOT2
Associated Gene/TranscriptCG11262-RA
Protein status:MIP04527.pep: gold
Sequenced Size:2272

Clone Sequence Records

MIP04527.complete Sequence

2272 bp assembled on 2009-04-30

GenBank Submission: BT082112.1

> MIP04527.complete
CTTAGACGTACCTTTCAAATGAAATTTCTGAGTGATATTTTTCGTGTAGC
AGATTTGTGCCAAATAGACGGAGTGCGCCAGGCATGGCCTTCGTCGCACC
AATCTAGCATTCCCCGTAGACTACGGATGCCTGAACAACCTGAACCGAAC
TACTTGGATGAGCCGGAGACAATCTCCGTCGGGCGATTCATCTTCAAGAT
CATAAGGATTGGTGCGCTTCTGCTGATTTGGGCTTTCTTTACTTACATTC
TGGTTCGGAATGCCACCACGCCGGATTTGACATCGGTGGTCACTGTGTTG
CCCAACGAGACTGTGCTCCGCCGCCTGTCCGTGCCCCATGATGCGACTCA
GATAACGCTGAAGGGTCCCATCGATTTGCAATTGCAGAAGCATGAAAGCG
TGATTATGGAGACGCCCCATGTGGGCGTACGCGTGGAGTGGCGGGATTCG
GAATTGAAAACCAAATTCTGGAGTTCGGATATGTGGATTGTCTATCTGGC
CGAGCAGAGTCAGGCTTTCACGAAGACGTCCAAAACCGTTCAGATCTCGG
AGGTTAGTAATGCCCAGGCGGTGATTTCGCTGGAGAGCAGAAGCGAGGAG
CCGGTGGCGCTGCTGATGGTGGTATCGGTGTATCCCTTGGTAACGGAAAA
TGGTGTACTCTATGCCGCTCTGCTGCTGATCGGTTTCTATATACTGATCG
TCTTCGAGCTTACGGATCGTACATTCGCTGCTCTTATGATGGCCACCACT
GGGATAGCGATTCTAACGGCGCTGGGAAATCGACCGACTCTGGAAACAAT
AATCTCCTGGATTGATTTCGAAACTCTAATACTGCTCCTCGGTATGATGA
TACTGGTGGCGATAATGTCCGAGACGGGTGTATTTGATTGGATGGCTGTG
CTGGCGTACCGAATATCCAAGGGTAATCCCTGGCCAATGCTCCTGCTGCT
CAGCTCAATTACCGCCATCATGTCCTGTATGCTCGATAATGTGACCATGC
TGCTTCTGATGGCGCCAATTGCGATCCGTTTGTGCGAAGCCATGGCCGTC
CAGACGCCACTTGTCCTGATAGTGGTGGTGATGTACTCAAATATCGGTGG
CACCCTCACGCCAGTGGGTGATCCACCCAATGTGATCATTGCCACCAATT
CGGAAGTGATCTCCGCCGGAGTGGATTTCCTCGATTTCACCATTCACATG
TTGCCTGGCGTTTTATTGGCGGCTGTAGCGGGCTATGCTGTCATGTATGT
GACCATGAGGAAATCTTTGTTTAAACTGGAGGAACAACAACTTGAGCTGG
CAGCTGAGCGGGAGAACAGTAGACGGCGATCGAGTGCGGATATTACGGCT
CGGGCAGAAGAAATGCGCATACGACAGCCGACGGGACGACAGTTACTGAA
GCCGGCCGAAAACTATTTTCAGACCCTGGCCCATTTGGAGGCACATCATC
GGATCCGGGACAAGACGCTGCTGATCAAGTGCCTCTTCACGCTGTGTTTT
GTGATCATATTTTTCCTGTTGCATTCACTGCCCTTTATGCACGGTGCCAC
ATTGGGTTGGGTGGCAATTTTGGCCGCCTTCCTGCTTCTCATTCTGGCCA
AGATGAACGACATTGAGGCGATACTTGACCAGGTCGAATGGTCAGCGCTG
CTCTTTCTGGCCGCTCTATTCGTGCTCACTGAGGCGGTGGATAAATTGGG
CTTCATTCGCTGGCTGTGTGATCTCACAGTCAAGGTGATCATGAGCGTCG
AGGAGCGTTATCAGACGACAGTGGCCATCCTGATAATCATCTGGATGTCC
GCCATTCTGGCGGCCTTTGTCGGCAATGTCCCGGTGACCACGATGCTGCT
GAGACTGAACATTGAGTTGCACCGTAACGATGCCATCAGCGTTCCATTAA
CGCCCCTCATTTGGGCTTTGTCATATGGCGCCTGTTTCGGTGGTAATGGC
ACCCTGATCGGGGCTTCGGCCAATGTTGTCGCAGCGGCAATCGCCCAACA
GTATGGCTATAAGATCTCCTTTGTGCAGTTCTTCATCTACGGCTTTCCCA
TGATGCTGACCAGTATTTTTCTCGCAACGGTTTACCTGCTCATCGCGCAC
TCGCTATTCGCGTGGCACAAGACGTAGTTTTCCAGGATACCAAGCCTCTG
GATGTTACTCCGATTCTAGCACATGGCTTCTGTAAGGAAGTGTATACATA
CATCCAAAATGTAAAGTAATTCGTCTTCCCCATTAAAGTTTACTATAGTT
TTTAAAAAAAAAAAAAAAAAAA

MIP04527.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:24:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG11262-RA 2158 CG11262-RA 32..2158 1..2127 10635 100 Plus
hoe1.b 2851 hoe1.b 1062..1154 808..900 165 78.4 Plus
hoe1.c 2856 hoe1.c 1067..1159 808..900 165 78.4 Plus
hoe1.b 2851 hoe1.b 2232..2281 1927..1976 145 86 Plus
hoe1.c 2856 hoe1.c 2237..2286 1927..1976 145 86 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:46:57
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 12985504..12987756 1..2253 11145 99.6 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:03:31 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:46:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12995166..12997421 1..2256 11265 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:19:09
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 12988266..12990521 1..2256 11265 99.9 Plus
Blast to na_te.dros performed 2019-03-16 07:46:56
Subject Length Description Subject Range Query Range Score Percent Strand
1731 4648 1731 DMTN1731 4648bp Derived from X07656 (g8700) (Rel. 36, Last updated, Version 6). 2636..2701 1067..1001 116 65.7 Minus

MIP04527.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:47:42 Download gff for MIP04527.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 12985504..12987756 1..2253 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:51:37 Download gff for MIP04527.complete
Subject Subject Range Query Range Percent Splice Strand
CG11262-RA 1..2109 19..2127 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:49:48 Download gff for MIP04527.complete
Subject Subject Range Query Range Percent Splice Strand
CG11262-RA 1..2109 19..2127 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:50:34 Download gff for MIP04527.complete
Subject Subject Range Query Range Percent Splice Strand
CG11262-RA 1..2109 19..2127 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:39:21 Download gff for MIP04527.complete
Subject Subject Range Query Range Percent Splice Strand
CG11262-RA 1..2109 19..2127 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-04-30 18:52:07 Download gff for MIP04527.complete
Subject Subject Range Query Range Percent Splice Strand
CG11262-RA 32..2158 1..2127 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:49:48 Download gff for MIP04527.complete
Subject Subject Range Query Range Percent Splice Strand
CG11262-RA 32..2284 1..2253 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:50:34 Download gff for MIP04527.complete
Subject Subject Range Query Range Percent Splice Strand
CG11262-RA 32..2284 1..2253 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:39:21 Download gff for MIP04527.complete
Subject Subject Range Query Range Percent Splice Strand
CG11262-RA 32..2284 1..2253 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:47:42 Download gff for MIP04527.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12995166..12997418 1..2253 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:47:42 Download gff for MIP04527.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12995166..12997418 1..2253 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:47:42 Download gff for MIP04527.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12995166..12997418 1..2253 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:50:34 Download gff for MIP04527.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 12988266..12990518 1..2253 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:40:41 Download gff for MIP04527.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12988266..12990518 1..2253 99   Plus

MIP04527.hyp Sequence

Translation from 0 to 2126

> MIP04527.hyp
LRRTFQMKFLSDIFRVADLCQIDGVRQAWPSSHQSSIPRRLRMPEQPEPN
YLDEPETISVGRFIFKIIRIGALLLIWAFFTYILVRNATTPDLTSVVTVL
PNETVLRRLSVPHDATQITLKGPIDLQLQKHESVIMETPHVGVRVEWRDS
ELKTKFWSSDMWIVYLAEQSQAFTKTSKTVQISEVSNAQAVISLESRSEE
PVALLMVVSVYPLVTENGVLYAALLLIGFYILIVFELTDRTFAALMMATT
GIAILTALGNRPTLETIISWIDFETLILLLGMMILVAIMSETGVFDWMAV
LAYRISKGNPWPMLLLLSSITAIMSCMLDNVTMLLLMAPIAIRLCEAMAV
QTPLVLIVVVMYSNIGGTLTPVGDPPNVIIATNSEVISAGVDFLDFTIHM
LPGVLLAAVAGYAVMYVTMRKSLFKLEEQQLELAAERENSRRRSSADITA
RAEEMRIRQPTGRQLLKPAENYFQTLAHLEAHHRIRDKTLLIKCLFTLCF
VIIFFLLHSLPFMHGATLGWVAILAAFLLLILAKMNDIEAILDQVEWSAL
LFLAALFVLTEAVDKLGFIRWLCDLTVKVIMSVEERYQTTVAILIIIWMS
AILAAFVGNVPVTTMLLRLNIELHRNDAISVPLTPLIWALSYGACFGGNG
TLIGASANVVAAAIAQQYGYKISFVQFFIYGFPMMLTSIFLATVYLLIAH
SLFAWHKT*

MIP04527.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:35:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG11262-PA 702 CG11262-PA 1..702 7..708 3530 100 Plus
CG31693-PA 688 CG31693-PA 1..683 7..706 1452 41.8 Plus
CG13801-PA 690 CG13801-PA 23..690 63..706 1449 43.5 Plus
CG31693-PB 607 CG31693-PB 1..602 96..706 1412 44.1 Plus
hoe1-PA 803 CG12787-PA 115..803 54..706 1368 43.2 Plus

MIP04527.pep Sequence

Translation from 0 to 2126

> MIP04527.pep
LRRTFQMKFLSDIFRVADLCQIDGVRQAWPSSHQSSIPRRLRMPEQPEPN
YLDEPETISVGRFIFKIIRIGALLLIWAFFTYILVRNATTPDLTSVVTVL
PNETVLRRLSVPHDATQITLKGPIDLQLQKHESVIMETPHVGVRVEWRDS
ELKTKFWSSDMWIVYLAEQSQAFTKTSKTVQISEVSNAQAVISLESRSEE
PVALLMVVSVYPLVTENGVLYAALLLIGFYILIVFELTDRTFAALMMATT
GIAILTALGNRPTLETIISWIDFETLILLLGMMILVAIMSETGVFDWMAV
LAYRISKGNPWPMLLLLSSITAIMSCMLDNVTMLLLMAPIAIRLCEAMAV
QTPLVLIVVVMYSNIGGTLTPVGDPPNVIIATNSEVISAGVDFLDFTIHM
LPGVLLAAVAGYAVMYVTMRKSLFKLEEQQLELAAERENSRRRSSADITA
RAEEMRIRQPTGRQLLKPAENYFQTLAHLEAHHRIRDKTLLIKCLFTLCF
VIIFFLLHSLPFMHGATLGWVAILAAFLLLILAKMNDIEAILDQVEWSAL
LFLAALFVLTEAVDKLGFIRWLCDLTVKVIMSVEERYQTTVAILIIIWMS
AILAAFVGNVPVTTMLLRLNIELHRNDAISVPLTPLIWALSYGACFGGNG
TLIGASANVVAAAIAQQYGYKISFVQFFIYGFPMMLTSIFLATVYLLIAH
SLFAWHKT*

MIP04527.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 15:56:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23750-PA 708 GF23750-PA 1..703 7..708 1888 55.7 Plus
Dana\GF21545-PA 847 GF21545-PA 148..847 45..706 1384 43.9 Plus
Dana\GF21513-PA 685 GF21513-PA 9..685 16..706 1193 35 Plus
Dana\GF21544-PA 852 GF21544-PA 306..852 179..706 977 39.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 15:56:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15613-PA 665 GG15613-PA 1..665 43..708 2701 83.9 Plus
Dere\GG21352-PA 637 GG21352-PA 4..637 73..706 1413 44.8 Plus
Dere\GG24342-PA 846 GG24342-PA 158..846 54..706 1386 43.2 Plus
Dere\GG14859-PA 681 GG14859-PA 14..681 63..706 1332 42.2 Plus
Dere\GG24341-PA 846 GG24341-PA 293..846 176..706 961 38.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 15:56:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10104-PA 855 GH10104-PA 156..855 45..706 1394 43.3 Plus
Dgri\GH13310-PA 1049 GH13310-PA 368..1049 62..706 1306 40.7 Plus
Dgri\GH13602-PA 711 GH13602-PA 12..707 30..708 1305 39.3 Plus
Dgri\GH10103-PA 881 GH10103-PA 345..880 186..705 944 37.7 Plus
Dgri\GH12246-PA 590 GH12246-PA 278..503 196..421 461 38.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:50:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG11262-PA 702 CG11262-PA 1..702 7..708 3530 100 Plus
CG31693-PA 688 CG31693-PA 1..683 7..706 1452 41.8 Plus
CG13801-PA 690 CG13801-PA 23..690 63..706 1449 43.5 Plus
CG31693-PB 607 CG31693-PB 1..602 96..706 1412 44.1 Plus
hoe1-PA 803 CG12787-PA 115..803 54..706 1368 43.2 Plus
hoe1-PI 812 CG12787-PI 124..812 54..706 1368 43.2 Plus
hoe1-PE 812 CG12787-PE 124..812 54..706 1368 43.2 Plus
hoe1-PD 812 CG12787-PD 124..812 54..706 1368 43.2 Plus
hoe1-PF 812 CG12787-PF 124..812 54..706 1368 43.2 Plus
hoe1-PB 812 CG12787-PB 124..812 54..706 1368 43.2 Plus
hoe1-PJ 846 CG12787-PJ 158..846 54..706 1368 43.2 Plus
hoe1-PC 846 CG12787-PC 158..846 54..706 1368 43.2 Plus
hoe1-PH 658 CG12787-PH 38..658 120..706 1327 45 Plus
hoe2-PA 846 CG15624-PA 293..846 176..706 1010 38.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 15:56:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14413-PA 805 GI14413-PA 106..805 45..706 1376 42.6 Plus
Dmoj\GI18174-PA 703 GI18174-PA 44..703 73..706 1233 38.8 Plus
Dmoj\GI14395-PA 852 GI14395-PA 340..852 212..706 918 38.8 Plus
Dmoj\GI18175-PA 692 GI18175-PA 10..688 50..706 816 30 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 15:56:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15458-PA 700 GL15458-PA 12..699 39..707 1705 50.1 Plus
Dper\GL19493-PA 860 GL19493-PA 161..860 45..706 1393 43 Plus
Dper\GL19492-PA 849 GL19492-PA 289..849 168..706 981 39 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 15:56:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA29039-PA 681 GA29039-PA 12..678 39..686 1631 50.1 Plus
Dpse\GA11811-PA 860 GA11811-PA 161..860 45..706 1391 43.3 Plus
Dpse\GA13854-PA 849 GA13854-PA 289..849 168..706 981 39 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 15:56:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25385-PA 702 GM25385-PA 1..702 7..708 3323 95.3 Plus
Dsec\GM14485-PA 690 GM14485-PA 12..690 52..706 1390 42.5 Plus
Dsec\GM18063-PA 847 GM18063-PA 159..847 54..706 1379 43 Plus
Dsec\GM16152-PA 573 GM16152-PA 1..573 96..706 1101 39.1 Plus
Dsec\GM18062-PA 846 GM18062-PA 293..846 176..706 956 38 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 15:56:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14418-PA 702 GD14418-PA 1..702 7..708 3328 95.4 Plus
Dsim\GD22681-PA 812 GD22681-PA 124..812 54..706 1388 43.2 Plus
Dsim\GD24340-PA 602 GD24340-PA 1..602 96..706 1385 44.3 Plus
Dsim\GD11986-PA 824 GD11986-PA 271..824 176..706 966 38.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 15:56:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16262-PA 850 GJ16262-PA 177..850 69..706 1394 43.3 Plus
Dvir\GJ14623-PA 1004 GJ14623-PA 378..1004 118..706 1371 45.6 Plus
Dvir\GJ14626-PA 712 GJ14626-PA 33..707 62..707 1302 42.1 Plus
Dvir\GJ16261-PA 849 GJ16261-PA 172..849 66..706 968 35.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 15:56:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19368-PA 660 GK19368-PA 7..660 73..706 1499 46.1 Plus
Dwil\GK24590-PA 824 GK24590-PA 151..824 69..706 1378 43.5 Plus
Dwil\GK24760-PA 502 GK24760-PA 1..502 204..706 1275 50.8 Plus
Dwil\GK24588-PA 865 GK24588-PA 345..865 204..706 982 39.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 15:56:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21939-PA 659 GE21939-PA 1..658 43..707 2678 83.6 Plus
Dyak\GE18721-PA 846 GE18721-PA 158..846 54..706 1385 43.2 Plus
Dyak\GE20316-PA 681 GE20316-PA 14..681 63..706 1272 41.7 Plus
Dyak\GE18720-PA 844 GE18720-PA 318..844 198..706 964 39.8 Plus
Dyak\GE12933-PA 454 GE12933-PA 172..428 431..689 563 46.9 Plus