Clone MIP04604 Report

Search the DGRC for MIP04604

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:46
Well:4
Vector:pOT2
Associated Gene/TranscriptCG14245-RA
Protein status:MIP04604.pep: gold
Sequenced Size:1596

Clone Sequence Records

MIP04604.complete Sequence

1596 bp assembled on 2009-03-19

GenBank Submission: BT072943.1

> MIP04604.complete
TCAGGCCCCCGAGCACATCAATAAGCGGCGAAAAAATACCATTCAATTGA
ATTTTTATTTCTCGCTTTCGGGGCGACGTGCGTGCGAGTGCCAACAAAAT
ATTTGCATGTAAAAGAATTTTCCGCCAGCCAAACGGCGAAACGAAGAGGC
AGCAGCGTGAATCAAAGGGAGAGGTATAAAAATTGTGAAATGAAATTTTA
GCATACGTGACGTATACGCAATATATTTAATTGCATTTCTGCCTCTTTGT
TTTCCATTCCGTTTAATACCGCTGCAAGTATGTTTTTAAAAGTGAGACGA
GAGTGAACAAAAAAGTGCGTCACATAATTGGGTTTCGGCATTTCGGAGTG
GTCGAATGAATTTTAAATCAGTGAACGGTGAGCCCTACCTGCGCTGTCTA
AAATAATGGCCTTGTCTTTGAAAATCTGAAAATACTCGGGGAAATGCTAC
AAATGCCACACGAATTAGCATAAATCACTGTGGCAAGGACAACGGCGGCA
GGAAGTGGGCATTTTGCAGCCAGCCAAGTGCCGTTCCTCCCGGTGGCTTC
ACTTAATGGCAGACATTAATAACCCGATTTAATTTATGGCCCAAAACTAA
CAAAAGCCCAATCCGCAAAACTGAGCAACAAAGGCCAAGGAGGCCTTTTC
CCAACTCCCGACTCCGACTGCACTGTGCAGTGCACTGGGGCAATTACTCA
AGTGCGCCAGGAGGACGAAGGACGTTGTGTGGCTTAAGGCGTACTCCTCC
TCCCACCGCGCAGCCAGGTGAAATTTGTTGGCCCAGCCCCAAAAATGCCT
TTGAGGCAGTGTTTTGAATTAATTAGCCAGCGTATCCAGCCGAGGCAACA
TCGTTGCTACTCCGCTTGTTTGCGGCCTGCCTCGGCTATCTCTGAAAATA
ATTTACAGCTGCCGTTGATGTCATGAATATGCAAGCAGGCCGACCGGGAT
GGGTACCCACCTGGACCCAACTGGCCAGCTCCTATCCAGCTCGGCTCGAG
CGGAAGAAACAGCAATCGGGCAAACAAACAGCGCTATAAAATGCGAAAAC
AGAGTGGGTTGCTGGGGGGTGGCAGGAAATACTAGATGAGCTTATCGCGA
CCACAGACAGCATCACACCTCAGTTCCGCTCGATAAGATTTCGGCTATTC
GTGGAGTGTATAAAAAGCTCGCCACCGATTAGCATAGGTCAGTCCAACGA
AAGCCACCCCTAGTTCAAGATGAAGTTCCTGCCTCTGTTCGCCTTTTTCC
TAATCCTCGGCTACTCCTCCTTCTGCAGCGGAGCTGCTGTGGCCAAGCCC
ACTGGTCAACCCGGTTGCCAAACGGCCGAGGAGCTGGAGGTGGCATTCTA
TGCCCACTTCTACCTGAAGAGCTCCTACTGGGTGTGCTCCACCCAGGGCG
TTCCCGCCACCCTCGCCCAGTGCCCCATTGCCTCCGCCTGGTTGGACTCC
GCCAAGGCCTGTGTTCCCTGGCCCCAGTGGGTGTGGTCGCCCACTGTCCA
GCCGCCCAGCCAACCCGAAGTTGCTGCATAGAATTGGAGATTTGACATAA
CAAAATAAAACAAATATGCAGTAATATTAAAAAAAAAAAAAAAAAA

MIP04604.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:27:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG14245-RA 1508 CG14245-RA 1..579 1002..1580 2895 100 Plus
CG14246-RA 1508 CG14246-RA 1..579 1002..1580 2895 100 Plus
CG14246.a 438 CG14246.a 68..154 291..377 435 100 Plus
CG14246.a 438 CG14246.a 1..69 105..173 345 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:47:59
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 22550651..22552228 1..1578 7845 99.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:03:40 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:47:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26727542..26729121 1..1580 7900 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:44:24
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 26468373..26469952 1..1580 7900 100 Plus
Blast to na_te.dros performed on 2019-03-15 18:47:57 has no hits.

MIP04604.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:49:05 Download gff for MIP04604.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 22550651..22552228 1..1578 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:07:30 Download gff for MIP04604.complete
Subject Subject Range Query Range Percent Splice Strand
CG14245-RA 1..312 1220..1531 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:41:24 Download gff for MIP04604.complete
Subject Subject Range Query Range Percent Splice Strand
CG14245-RA 1..312 1220..1531 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:31:44 Download gff for MIP04604.complete
Subject Subject Range Query Range Percent Splice Strand
CG14245-RA 1..312 1220..1531 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:01:13 Download gff for MIP04604.complete
Subject Subject Range Query Range Percent Splice Strand
CG14245-RA 1..312 1220..1531 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-03-19 15:50:38 Download gff for MIP04604.complete
Subject Subject Range Query Range Percent Splice Strand
CG14246-RA 1..577 1002..1578 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:41:24 Download gff for MIP04604.complete
Subject Subject Range Query Range Percent Splice Strand
CG14245-RA 1..577 1002..1578 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:31:44 Download gff for MIP04604.complete
Subject Subject Range Query Range Percent Splice Strand
CG14245-RA 1..393 1186..1578 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:01:13 Download gff for MIP04604.complete
Subject Subject Range Query Range Percent Splice Strand
CG14245-RA 1..393 1186..1578 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:49:05 Download gff for MIP04604.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26727542..26729119 1..1578 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:49:05 Download gff for MIP04604.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26727542..26729119 1..1578 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:49:05 Download gff for MIP04604.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26727542..26729119 1..1578 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:31:44 Download gff for MIP04604.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22553264..22554841 1..1578 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:15:56 Download gff for MIP04604.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26468373..26469950 1..1578 100   Plus

MIP04604.hyp Sequence

Translation from 1219 to 1530

> MIP04604.hyp
MKFLPLFAFFLILGYSSFCSGAAVAKPTGQPGCQTAEELEVAFYAHFYLK
SSYWVCSTQGVPATLAQCPIASAWLDSAKACVPWPQWVWSPTVQPPSQPE
VAA*

MIP04604.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:13:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG14245-PB 103 CG14245-PB 1..103 1..103 568 100 Plus
CG14245-PA 103 CG14245-PA 1..103 1..103 568 100 Plus
CG14645-PA 97 CG14645-PA 25..96 29..100 172 38.9 Plus
CG14300-PA 94 CG14300-PA 18..92 22..97 156 34.2 Plus
CG14246-PC 93 CG14246-PC 8..91 29..99 147 32.9 Plus

MIP04604.pep Sequence

Translation from 1219 to 1530

> MIP04604.pep
MKFLPLFAFFLILGYSSFCSGAAVAKPTGQPGCQTAEELEVAFYAHFYLK
SSYWVCSTQGVPATLAQCPIASAWLDSAKACVPWPQWVWSPTVQPPSQPE
VAA*

MIP04604.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 10:53:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16453-PA 104 GF16453-PA 1..103 1..103 343 61.2 Plus
Dana\GF18205-PA 97 GF18205-PA 14..96 18..100 168 37.3 Plus
Dana\GF16020-PA 95 GF16020-PA 22..94 28..100 157 39.7 Plus
Dana\GF16454-PA 79 GF16454-PA 7..78 28..100 152 37 Plus
Dana\GF18713-PA 99 GF18713-PA 19..90 28..100 147 37 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 10:53:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11498-PA 103 GG11498-PA 1..103 1..103 476 91.3 Plus
Dere\GG12307-PA 99 GG12307-PA 1..96 1..100 164 34.7 Plus
Dere\GG11500-PA 86 GG11500-PA 7..84 28..99 144 35.4 Plus
Dere\GG16351-PA 94 GG16351-PA 18..92 22..97 138 34.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 10:53:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18866-PA 98 GH18866-PA 1..94 1..98 168 37.8 Plus
Dgri\GH23828-PA 88 GH23828-PA 17..88 28..100 138 34.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:14:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG14245-PB 103 CG14245-PB 1..103 1..103 568 100 Plus
CG14245-PA 103 CG14245-PA 1..103 1..103 568 100 Plus
CG14645-PA 97 CG14645-PA 25..96 29..100 172 38.9 Plus
CG14300-PA 94 CG14300-PA 18..92 22..97 156 34.2 Plus
CG14246-PC 93 CG14246-PC 8..91 29..99 147 32.9 Plus
CG14246-PB 93 CG14246-PB 8..91 29..99 147 32.9 Plus
CG14246-PA 93 CG14246-PA 8..91 29..99 147 32.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 10:53:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22144-PA 99 GI22144-PA 4..97 6..99 279 57.4 Plus
Dmoj\GI24723-PA 97 GI24723-PA 15..94 19..98 171 40 Plus
Dmoj\GI24570-PA 89 GI24570-PA 17..88 28..100 141 32.9 Plus
Dmoj\GI22143-PA 104 GI22143-PA 7..97 6..99 140 38.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 10:53:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27219-PA 104 GL27219-PA 1..104 1..103 333 61.5 Plus
Dper\GL12319-PA 97 GL12319-PA 10..94 4..98 170 34.7 Plus
Dper\GL23592-PA 102 GL23592-PA 21..95 28..103 155 36.8 Plus
Dper\GL23111-PA 95 GL23111-PA 19..93 22..97 142 35.5 Plus
Dper\GL27220-PA 80 GL27220-PA 7..77 28..98 128 34.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 10:53:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26776-PA 104 GA26776-PA 1..104 1..103 333 61.5 Plus
Dpse\GA13143-PA 97 GA13143-PA 10..94 4..98 170 34.7 Plus
Dpse\GA17395-PA 102 GA17395-PA 21..95 28..103 155 36.8 Plus
Dpse\GA27144-PA 95 GA27144-PA 19..93 22..97 143 35.5 Plus
Dpse\GA17212-PA 80 GA17212-PA 7..78 28..99 135 35.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 10:53:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10341-PA 103 GM10341-PA 1..103 1..103 503 96.1 Plus
Dsec\GM10746-PA 97 GM10746-PA 15..96 19..100 172 37.8 Plus
Dsec\GM18688-PA 94 GM18688-PA 18..92 22..97 141 34.2 Plus
Dsec\GM10342-PA 89 GM10342-PA 7..88 28..100 136 33.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 10:53:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21301-PA 103 GD21301-PA 1..103 1..103 503 96.1 Plus
Dsim\GD19718-PA 97 GD19718-PA 1..96 1..100 169 33 Plus
Dsim\GD20155-PA 94 GD20155-PA 18..92 22..97 141 34.2 Plus
Dsim\GD21302-PA 91 GD21302-PA 7..89 28..99 140 33.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 10:53:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24263-PA 102 GJ24263-PA 1..101 1..103 289 57.3 Plus
Dvir\GJ14550-PA 97 GJ14550-PA 1..94 1..98 182 36.7 Plus
Dvir\GJ22636-PA 89 GJ22636-PA 17..88 28..100 144 35.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 10:53:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13541-PA 106 GK13541-PA 19..104 17..102 313 68.6 Plus
Dwil\GK11657-PA 99 GK11657-PA 11..97 4..100 172 35.1 Plus
Dwil\GK18958-PA 84 GK18958-PA 11..83 28..100 149 37.8 Plus
Dwil\GK11341-PA 97 GK11341-PA 21..95 28..103 147 35.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 10:53:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23689-PA 103 GE23689-PA 1..103 1..103 482 91.3 Plus
Dyak\GE25408-PA 97 GE25408-PA 1..96 1..100 171 34.7 Plus
Dyak\GE23690-PA 89 GE23690-PA 7..87 28..99 140 32.9 Plus
Dyak\GE25180-PA 94 GE25180-PA 18..92 22..97 139 34.2 Plus
Dyak\GE25179-PA 94 GE25179-PA 18..92 22..97 139 34.2 Plus