Clone Sequence Records
MIP04624.complete Sequence
1109 bp assembled on 2009-04-03
GenBank Submission: BT081391.1
> MIP04624.complete
TCAACCGCACCGCAATTTCATTTGGTTGGCCAATTGAATGATGTAAACAT
GTCTGCACATTACTGCGGCTACAACCCGCCGCCGCCGAACTTCAAAACCT
TTTTTCCCGAAAAATACAAGGACCGACTGCAGCGACTTCCCAATTTTGGA
AAATTGCGATCATCGTGGGAGATCCACAGGCGACCGACCCTCGTGGTTCT
TCATGTGTTTGCGGATGATATCGGTGCGCTAGACAAATGGATAGATGTGG
TATACCGACTAGCTGCCCCTGGGTTTCTTGGCGGCGAGATGGACTTTTTC
GTGGACGATCTGTGGCAGTCGTTCATCTTCAATGAGGATGACTTCAGCTT
CTCTCGGAGTGACGAAGGATGTACAGTGGACTCATTTCCCCTGATATACG
CCGCAAATTCAACTGGAAAGGTATTCTTCTTTGGGGATTTCACTGGGCCT
AAACTGCCCGACCTGGAGAGTCTAAGGGATTTCTGCGATCAGGTGATTAA
GGGGATAGCCGAGGAGCCCACTGCTAGAGATCCCAAGGTTGAGAATATAA
GCCTTGATAGCTGGAACGAACTTATGTACGCCAGTGATAATGATATAGCG
ATTTGCTTCTACAACTCCTTGCAAAATGGCGCTGAAGTCAATAGTAGTCT
TATGGCAAATCTGGATTGGCTGGCCGATAAACTGAAACAGGAGTCAGTGC
TTCTGTACAAGATGGATATACATGGATCTAGAATCCCAAAAAGTTCCTCG
TAGAGTCGCCACCCGACTTCTTCTTCCTCCAGGCAAACCAAAAGCATAAT
CCCTTGCGGTGCAAATATCAGCTGAACATGTGGACAATGCTGAGATTTGT
AGCCGAAAATTCTAGCAAGGAGCTTAGCTACTATAACCGTCGTGGAAATC
GAAAACTCCATGCTGATTTGTTAATCCATATAAAGGATTATTTTAATTTG
AGCAGGAATAAGACCCGTTATTAGTAGTGGGTATAACATTAAAACTTTGA
TATTTATCTTTATTTAACTGTGCATATAGACCTTTGTTTTTAATGACCTT
ACATCTTAGAGAATTGTAAAATTATAACTCAGTCGGTATTCAAAAAAAAA
AAAAAAAAA
MIP04624.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:28:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14906-RB | 2327 | CG14906-RB | 1..1093 | 1..1093 | 5465 | 100 | Plus |
CG14907-RB | 2327 | CG14907-RB | 1..1093 | 1..1093 | 5465 | 100 | Plus |
CG14907-RA | 1091 | CG14907-RA | 1..1091 | 1..1091 | 5455 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:32:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 12475779..12476869 | 1091..1 | 5455 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:03:43 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:32:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 16651215..16652307 | 1093..1 | 5465 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:45:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 16392046..16393138 | 1093..1 | 5465 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 17:32:39 has no hits.
MIP04624.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:33:39 Download gff for
MIP04624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 12475779..12476869 | 1..1091 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:08:15 Download gff for
MIP04624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14907-RB | 1..705 | 49..753 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:42:50 Download gff for
MIP04624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14907-RB | 1..705 | 49..753 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:34:59 Download gff for
MIP04624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14907-RA | 1..705 | 49..753 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:00:59 Download gff for
MIP04624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14907-RA | 1..705 | 49..753 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-04-03 09:27:30 Download gff for
MIP04624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14907-RB | 1..1059 | 33..1091 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:42:50 Download gff for
MIP04624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14906-RB | 1..1091 | 1..1091 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:34:59 Download gff for
MIP04624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14907-RA | 13..1103 | 1..1091 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:00:59 Download gff for
MIP04624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14907-RA | 13..1103 | 1..1091 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:33:39 Download gff for
MIP04624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 16651217..16652307 | 1..1091 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:33:39 Download gff for
MIP04624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 16651217..16652307 | 1..1091 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:33:39 Download gff for
MIP04624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 16651217..16652307 | 1..1091 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:34:59 Download gff for
MIP04624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 12476939..12478029 | 1..1091 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:17:43 Download gff for
MIP04624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 16392048..16393138 | 1..1091 | 100 | | Minus |
MIP04624.hyp Sequence
Translation from 0 to 752
> MIP04624.hyp
STAPQFHLVGQLNDVNMSAHYCGYNPPPPNFKTFFPEKYKDRLQRLPNFG
KLRSSWEIHRRPTLVVLHVFADDIGALDKWIDVVYRLAAPGFLGGEMDFF
VDDLWQSFIFNEDDFSFSRSDEGCTVDSFPLIYAANSTGKVFFFGDFTGP
KLPDLESLRDFCDQVIKGIAEEPTARDPKVENISLDSWNELMYASDNDIA
ICFYNSLQNGAEVNSSLMANLDWLADKLKQESVLLYKMDIHGSRIPKSSS
*
MIP04624.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:39:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14907-PA | 234 | CG14907-PA | 1..234 | 17..250 | 1258 | 100 | Plus |
MIP04624.pep Sequence
Translation from 0 to 752
> MIP04624.pep
STAPQFHLVGQLNDVNMSAHYCGYNPPPPNFKTFFPEKYKDRLQRLPNFG
KLRSSWEIHRRPTLVVLHVFADDIGALDKWIDVVYRLAAPGFLGGEMDFF
VDDLWQSFIFNEDDFSFSRSDEGCTVDSFPLIYAANSTGKVFFFGDFTGP
KLPDLESLRDFCDQVIKGIAEEPTARDPKVENISLDSWNELMYASDNDIA
ICFYNSLQNGAEVNSSLMANLDWLADKLKQESVLLYKMDIHGSRIPKSSS
*
MIP04624.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:58:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF17926-PA | 307 | GF17926-PA | 6..235 | 21..250 | 740 | 58.7 | Plus |
Dana\GF17927-PA | 462 | GF17927-PA | 3..129 | 68..201 | 258 | 41.8 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:58:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG16814-PA | 300 | GG16814-PA | 1..231 | 17..247 | 1111 | 87.4 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:58:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH17221-PA | 313 | GH17221-PA | 2..229 | 22..248 | 405 | 37.1 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:37:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14907-PA | 234 | CG14907-PA | 1..234 | 17..250 | 1258 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:58:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM15413-PA | 308 | GM15413-PA | 1..232 | 17..248 | 1163 | 92.7 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:58:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD20272-PA | 308 | GD20272-PA | 1..232 | 17..248 | 1173 | 93.1 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:58:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ23882-PA | 308 | GJ23882-PA | 6..227 | 29..247 | 373 | 34.5 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:58:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE26133-PA | 302 | GE26133-PA | 1..231 | 17..247 | 1059 | 81.8 | Plus |