Clone Sequence Records
MIP04749.complete Sequence
1918 bp assembled on 2009-04-04
GenBank Submission: BT081961.1
> MIP04749.complete
ACAGTCAATTCTGATAACGAACAGCAGCCTCAAAAATGCCGCCGAAAGTG
AAGAAGGAGAAGAAGGATGTGAACAAGGTGACCCAGGTGGACAGAACCTT
CTACGAGCTGACCATCACGGATCTCAACCAGAAACTAGCTCGACTGCGAT
CCCACGTGACCACCGTCGATGAGTCCAACATCACGCTGACCGAGAAACTC
AAGGAAGTGGAGGCCGATGGCGTCGACGTGGCCGCTCACTTGGAACGCAC
CCTGGCGGAGAGGAATAACTCGATCACCGAACTGGAGGAGCGCCTGGTAG
AGATCACCAAGGTGCGGGATGTGGAGAACCGCGTGGCACAGGAGAAGATC
GGCGACTTGGAGTCGAAATACAAGGCCATGCACGACCAGTTGACCTCCGA
AATAAAGCTGCTTAATGGCAAGCTGAATTCCCTCGACGAGTTCCGCATCC
AGAGGGATGTCCTGTTGGCCAAGTTCGATGAGCAGGAGGCGGATCTCAAT
GAGCGCGAGAAGGATCACAAGGAGGCGCTCTATAATATGGAACAACGAGC
TGTGGTGGAGAAGGATGCGCTAAAAAAGGAGGTCGAACAGAAGCTGCTGC
AAGTTTCCGAGGACTTCACCCGGTCCAGTGAGATCCGCAACGCTGGCTAC
ACCCGCCGCCTGATTCGTGAGAACATAGCCCTGCAAAAGGAGATCGATCT
ACTGGTCATGTCCCAGATAAAACTGCAGCAGGCATATACCAACCAGAAGT
CCAAGCACAAGGAGATGGAGGAGCAGTACAGTGCCCTCGATCAAATCAAA
AACGAGCTGGTCCGCAACTCCGTGAACAAGATCAAAATCATTGAGGGTCT
GACCAGGAACTACGAGAAACTGAAAGCCAAGTACGTGGAGGTACTGCGCT
ACAAGAAGGCCTATGAATCCCTTCTCCAAGCTGAAAAGTGCGAGAATGTC
AAGCAAAAGGATGCGGCCGGAAAACTCCGGACCCTGGCCAAGCGAATGGA
GATTTTGGATCTGGACAATCGAAATCTGGAGGTGGTCCATGCCCAGCACG
AGATCGAGATTACTCGACTGCGTGGAGTCATTCAAGAGATCAAGTGCACT
GTGCGGGATGCGATTGTGGCGGAGCAGGCAGCCAAGAAATTCCCGGAGAG
ATTAGTCGAGGCCAATGTGGATGATCCCGCAATGATAAATGAAGTTCGGG
AGGAGGCCATATCCCTTTGCAAGCTGAAACGCAGCGATTTGCTCTCCCAG
CTTATGAGCATCGTGAGCTCCCATTCGGAGGAGCTTCCGAAGACTCCATC
GATTGCCTCCATTGTCAGTGCCACCTCATCGCTGTATGCTCCAGGTAAAA
TGGGCTTCATGCCCACGAGACCCAAAGCAACGCCATTCGACGCCTTCCGC
AGCGAGGTCATCGAACAGGAGCCGGATCGCACCGTTCCGGAGGATCTGCA
AAAGCAGAAGATGCAGGATCGGCTAATGACCTCGTTGCGAGGTGACGAGA
ATACCATAATCGATGTGGAATTCGGCACTACTCTATACGTTTCATCATCG
CGCGAGGACGATCTCATTGAGGTGGAGGAGGAGCCACTGGAGGAGCCAGA
GGGTTCCACCAGCTCCATGTCTGTGAAGAAGGCCAGCAGTGAGGGTTCAG
TGGCTCCGCCCGAAACCGTACCGCTAGCCGTTTCCGCATCCTCGAAGGAC
ATCAAGGGTGCTCCCAGCATTGGGGCTCTGGACACACTGACGGCCACATC
CAAAATGACGGGTGTTACCAACGAGGACGAGGGCGAGGAGGAAGGCGAGG
AGGAGGACTTCGATGTGCAGTTCGTCTACTAGAGGGATATGAAAATTGAG
TTTACTTGTAGTTCCAATTTTGTTGAGTCTTGAATAAATATGTGCAAAGT
CAAAAAAAAAAAAAAAAA
MIP04749.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:29:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17122-RA | 1952 | CG17122-RA | 47..1952 | 1..1906 | 9530 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 15:02:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chr3L | 24539361 | chr3L | 20262541..20264441 | 1901..1 | 9445 | 99.8 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:03:53 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 15:02:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20273384..20275289 | 1906..1 | 9530 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:45:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28103327 | 3L | 20266484..20268389 | 1906..1 | 9530 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 15:02:11 has no hits.
MIP04749.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 15:03:14 Download gff for
MIP04749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chr3L | 20262541..20264441 | 1..1901 | 97 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:08:35 Download gff for
MIP04749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17122-RA | 1..1797 | 36..1832 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:43:31 Download gff for
MIP04749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17122-RA | 1..1797 | 36..1832 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:40:06 Download gff for
MIP04749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17122-RA | 1..1797 | 36..1832 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:39:42 Download gff for
MIP04749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17122-RA | 1..1797 | 36..1832 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-04-04 15:21:19 Download gff for
MIP04749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17122-RA | 47..1947 | 1..1901 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:43:31 Download gff for
MIP04749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17122-RA | 47..1947 | 1..1901 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:40:06 Download gff for
MIP04749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17122-RA | 47..1947 | 1..1901 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:39:42 Download gff for
MIP04749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17122-RA | 47..1947 | 1..1901 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:03:14 Download gff for
MIP04749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20273389..20275289 | 1..1901 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:03:14 Download gff for
MIP04749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20273389..20275289 | 1..1901 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:03:14 Download gff for
MIP04749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20273389..20275289 | 1..1901 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:40:06 Download gff for
MIP04749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20266489..20268389 | 1..1901 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:18:31 Download gff for
MIP04749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20266489..20268389 | 1..1901 | 100 | | Minus |
MIP04749.pep Sequence
Translation from 35 to 1831
> MIP04749.pep
MPPKVKKEKKDVNKVTQVDRTFYELTITDLNQKLARLRSHVTTVDESNIT
LTEKLKEVEADGVDVAAHLERTLAERNNSITELEERLVEITKVRDVENRV
AQEKIGDLESKYKAMHDQLTSEIKLLNGKLNSLDEFRIQRDVLLAKFDEQ
EADLNEREKDHKEALYNMEQRAVVEKDALKKEVEQKLLQVSEDFTRSSEI
RNAGYTRRLIRENIALQKEIDLLVMSQIKLQQAYTNQKSKHKEMEEQYSA
LDQIKNELVRNSVNKIKIIEGLTRNYEKLKAKYVEVLRYKKAYESLLQAE
KCENVKQKDAAGKLRTLAKRMEILDLDNRNLEVVHAQHEIEITRLRGVIQ
EIKCTVRDAIVAEQAAKKFPERLVEANVDDPAMINEVREEAISLCKLKRS
DLLSQLMSIVSSHSEELPKTPSIASIVSATSSLYAPGKMGFMPTRPKATP
FDAFRSEVIEQEPDRTVPEDLQKQKMQDRLMTSLRGDENTIIDVEFGTTL
YVSSSREDDLIEVEEEPLEEPEGSTSSMSVKKASSEGSVAPPETVPLAVS
ASSKDIKGAPSIGALDTLTATSKMTGVTNEDEGEEEGEEEDFDVQFVY*
MIP04749.pep Blast Records
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 16:14:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dgri\GH18006-PA | 897 | GH18006-PA | 1..110 | 439..547 | 168 | 57.4 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:24:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17122-PA | 598 | CG17122-PA | 1..598 | 1..598 | 2957 | 100 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 16:14:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dwil\GK18286-PA | 599 | GK18286-PA | 1..599 | 1..598 | 2063 | 71.1 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 16:14:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dyak\GE22754-PA | 1388 | GE22754-PA | 487..612 | 468..593 | 415 | 83.3 | Plus |
MIP04749.hyp Sequence
Translation from 35 to 1831
> MIP04749.hyp
MPPKVKKEKKDVNKVTQVDRTFYELTITDLNQKLARLRSHVTTVDESNIT
LTEKLKEVEADGVDVAAHLERTLAERNNSITELEERLVEITKVRDVENRV
AQEKIGDLESKYKAMHDQLTSEIKLLNGKLNSLDEFRIQRDVLLAKFDEQ
EADLNEREKDHKEALYNMEQRAVVEKDALKKEVEQKLLQVSEDFTRSSEI
RNAGYTRRLIRENIALQKEIDLLVMSQIKLQQAYTNQKSKHKEMEEQYSA
LDQIKNELVRNSVNKIKIIEGLTRNYEKLKAKYVEVLRYKKAYESLLQAE
KCENVKQKDAAGKLRTLAKRMEILDLDNRNLEVVHAQHEIEITRLRGVIQ
EIKCTVRDAIVAEQAAKKFPERLVEANVDDPAMINEVREEAISLCKLKRS
DLLSQLMSIVSSHSEELPKTPSIASIVSATSSLYAPGKMGFMPTRPKATP
FDAFRSEVIEQEPDRTVPEDLQKQKMQDRLMTSLRGDENTIIDVEFGTTL
YVSSSREDDLIEVEEEPLEEPEGSTSSMSVKKASSEGSVAPPETVPLAVS
ASSKDIKGAPSIGALDTLTATSKMTGVTNEDEGEEEGEEEDFDVQFVY*
MIP04749.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:28:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17122-PA | 598 | CG17122-PA | 1..598 | 1..598 | 2957 | 100 | Plus |
