Clone MIP04751 Report

Search the DGRC for MIP04751

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:47
Well:51
Vector:pOT2
Associated Gene/TranscriptCG17140-RA
Protein status:MIP04751.pep: gold
Sequenced Size:1224

Clone Sequence Records

MIP04751.complete Sequence

1224 bp assembled on 2009-09-15

GenBank Submission: BT099766.1

> MIP04751.complete
CAAAATTTTAAATTTATACCTATTTATTTTTGCTATTTTTTTAAAGTATT
TTCAAAATGACAAATATGAAGCAACGGCTGCGCAACTTGTTTCGCCGGAA
CAAAATGCGCGCACGGCCCACTACAGTGGCCAGTGATGCGAATAAGGAGC
AGCCGGAGCCACCTAAGCAGGAGCCAAGCAAACAGAAGAAAACTAAGCAG
GATGCCTCCAAGCAGGAGCCACCTAAGCAGGAAGAGCCCGAAAAGCCACC
CAAGGAAGTCGAAGTGGAGATAATACCCTCGCCAACGTCAGAGGGCGAAA
TGCCCACCTACTTCCATGTGGGCGCCTTGGCGAAGGATTGCCTCATCAAT
GGCTTCAAGATCGGCGCATGGCAGATGCACTGCAGCACGCGAACCGATAA
TGACTTCTATCTGAACACCTTCGGCGAGGGCTATCCCACCATGAAGAACG
TATTTGGCGGCATGGAGGTGTTCAAGGAAGTGGGCAACTACAGCACGTCC
CTCGGCTGGTTCACCAACAATGATCTTCTCTCGGAGATCGCTGTGCGCGG
CATGAACTTTGGCAGTCGATTGTATGGACTGCTCAAGTCAACAATTGGCA
CAAAAGACGAAGTGAGCTTTCAAACGAAGCTGAAGTGCGGGTTGGAGCGC
GATCCCGTGAAGGTGGAACTGGTGGTGCCTCTGTACAACGAACCCCTATT
TCTGGGCTATGTCCTGGTGGCGCCTGTAGAGAATTGGGTGCTGGGATATC
GAACGGAGTACAACTTTGACGAAAAGGGATTCGATAAGCACGCCCTGTGC
CTGGGCTACAATAATGGGAGGACCGAAGTGGGTCTAAAACTCGAGAATTT
CGAGGATCTTCGAGGCTCGATCTTCCAAAGGATCGGCGAAGCCTGGGCCT
TTGCCATCAAGACGAATCTCTACAGTTCGGAAAATGTGAAACAGTTTGCC
ATTGGGGTTCAGTACGACTTCCAGAATGGCACCATGGTGAAGGCCAAGCT
GCGGGAGGACTCCAGAATGGGGTTCGTCTACCAATCAAAGATTGGGGAGA
ACATCGATGTTGGCTATCACTTGGCCTTCGATGGAGTAGATCCCATTGGT
GGAGCCCATAGGATTGGCGTTTCCTGGGGTTTTCACTGTTGAAAAGAATG
GTTTACTATGTACTATGATTTTACTATACATGATTAATATAAATAAATAA
TTTGTAAAAAAAAAAAAAAAAAAA

MIP04751.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:28:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG17139-RA 2398 CG17139-RA 1190..2395 1..1206 6030 100 Plus
CG17140-RB 1263 CG17140-RB 55..1260 1..1206 6030 100 Plus
CG17140-RA 2398 CG17140-RA 1190..2395 1..1206 6030 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 13:53:41
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 10842509..10843118 610..1 3050 100 Minus
chr2L 23010047 chr2L 10841788..10842151 1205..842 1820 100 Minus
chr2L 23010047 chr2L 10842210..10842440 841..611 1155 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:03:54 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 13:53:39
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10843739..10844348 610..1 3050 100 Minus
2L 23513712 2L 10843017..10843381 1206..842 1825 100 Minus
2L 23513712 2L 10843440..10843670 841..611 1155 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:45:36
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10843739..10844348 610..1 3050 100 Minus
2L 23513712 2L 10843017..10843381 1206..842 1825 100 Minus
2L 23513712 2L 10843440..10843670 841..611 1155 100 Minus
2L 23513712 2L 10845283..10845380 436..339 145 76.5 Minus
Blast to na_te.dros performed on 2019-03-16 13:53:39 has no hits.

MIP04751.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 13:54:50 Download gff for MIP04751.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 10841812..10842151 842..1181 100 <- Minus
chr2L 10842210..10842440 611..841 100 <- Minus
chr2L 10842509..10843118 1..610 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:54:30 Download gff for MIP04751.complete
Subject Subject Range Query Range Percent Splice Strand
CG17140-RB 1..1086 57..1142 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:43:18 Download gff for MIP04751.complete
Subject Subject Range Query Range Percent Splice Strand
CG17140-RB 1..1086 57..1142 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:31:09 Download gff for MIP04751.complete
Subject Subject Range Query Range Percent Splice Strand
CG17140-RA 1..1086 57..1142 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:25:41 Download gff for MIP04751.complete
Subject Subject Range Query Range Percent Splice Strand
CG17140-RA 1..1086 57..1142 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-09-15 17:42:39 Download gff for MIP04751.complete
Subject Subject Range Query Range Percent Splice Strand
CG17139-RA 1190..2394 1..1205 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:43:18 Download gff for MIP04751.complete
Subject Subject Range Query Range Percent Splice Strand
CG17139-RA 1190..2394 1..1205 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:31:09 Download gff for MIP04751.complete
Subject Subject Range Query Range Percent Splice Strand
CG17140-RA 1190..2394 1..1205 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:25:41 Download gff for MIP04751.complete
Subject Subject Range Query Range Percent Splice Strand
CG17140-RA 1190..2394 1..1205 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:54:50 Download gff for MIP04751.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10843018..10843381 842..1205 100 <- Minus
2L 10843440..10843670 611..841 100 <- Minus
2L 10843739..10844348 1..610 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:54:50 Download gff for MIP04751.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10843018..10843381 842..1205 100 <- Minus
2L 10843440..10843670 611..841 100 <- Minus
2L 10843739..10844348 1..610 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:54:50 Download gff for MIP04751.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10843018..10843381 842..1205 100 <- Minus
2L 10843440..10843670 611..841 100 <- Minus
2L 10843739..10844348 1..610 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:31:09 Download gff for MIP04751.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10843440..10843670 611..841 100 <- Minus
arm_2L 10843739..10844348 1..610 100   Minus
arm_2L 10843018..10843381 842..1205 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:18:16 Download gff for MIP04751.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10843018..10843381 842..1205 100 <- Minus
2L 10843440..10843670 611..841 100 <- Minus
2L 10843739..10844348 1..610 100   Minus

MIP04751.hyp Sequence

Translation from 56 to 1141

> MIP04751.hyp
MTNMKQRLRNLFRRNKMRARPTTVASDANKEQPEPPKQEPSKQKKTKQDA
SKQEPPKQEEPEKPPKEVEVEIIPSPTSEGEMPTYFHVGALAKDCLINGF
KIGAWQMHCSTRTDNDFYLNTFGEGYPTMKNVFGGMEVFKEVGNYSTSLG
WFTNNDLLSEIAVRGMNFGSRLYGLLKSTIGTKDEVSFQTKLKCGLERDP
VKVELVVPLYNEPLFLGYVLVAPVENWVLGYRTEYNFDEKGFDKHALCLG
YNNGRTEVGLKLENFEDLRGSIFQRIGEAWAFAIKTNLYSSENVKQFAIG
VQYDFQNGTMVKAKLREDSRMGFVYQSKIGENIDVGYHLAFDGVDPIGGA
HRIGVSWGFHC*

MIP04751.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:43:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG17140-PB 361 CG17140-PB 1..361 1..361 1930 100 Plus
CG17140-PA 361 CG17140-PA 1..361 1..361 1930 100 Plus
CG17139-PA 340 CG17139-PA 3..339 4..360 916 47.6 Plus
porin-PE 282 CG6647-PE 4..276 83..355 283 26.2 Plus
porin-PD 282 CG6647-PD 4..276 83..355 283 26.2 Plus

MIP04751.pep Sequence

Translation from 56 to 1141

> MIP04751.pep
MTNMKQRLRNLFRRNKMRARPTTVASDANKEQPEPPKQEPSKQKKTKQDA
SKQEPPKQEEPEKPPKEVEVEIIPSPTSEGEMPTYFHVGALAKDCLINGF
KIGAWQMHCSTRTDNDFYLNTFGEGYPTMKNVFGGMEVFKEVGNYSTSLG
WFTNNDLLSEIAVRGMNFGSRLYGLLKSTIGTKDEVSFQTKLKCGLERDP
VKVELVVPLYNEPLFLGYVLVAPVENWVLGYRTEYNFDEKGFDKHALCLG
YNNGRTEVGLKLENFEDLRGSIFQRIGEAWAFAIKTNLYSSENVKQFAIG
VQYDFQNGTMVKAKLREDSRMGFVYQSKIGENIDVGYHLAFDGVDPIGGA
HRIGVSWGFHC*

MIP04751.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:00:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14062-PA 346 GF14062-PA 62..346 80..361 765 48.8 Plus
Dana\GF14063-PA 284 GF14063-PA 10..284 32..321 757 46.9 Plus
Dana\GF14061-PA 333 GF14061-PA 1..330 1..360 746 40.8 Plus
Dana\GF14059-PA 315 GF14059-PA 37..309 83..355 276 27.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:00:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10352-PA 358 GG10352-PA 1..358 1..361 1760 89.5 Plus
Dere\GG10351-PA 338 GG10351-PA 3..337 4..360 912 46.8 Plus
Dere\GG10349-PA 282 GG10349-PA 4..276 83..355 270 27.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:00:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13334-PA 335 GH13334-PA 2..335 10..361 628 36.1 Plus
Dgri\GH13331-PA 282 GH13331-PA 4..276 83..355 272 27.1 Plus
Dgri\GH14201-PA 283 GH14201-PA 5..283 83..361 195 24.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:04:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG17140-PB 361 CG17140-PB 1..361 1..361 1930 100 Plus
CG17140-PA 361 CG17140-PA 1..361 1..361 1930 100 Plus
CG17139-PA 340 CG17139-PA 3..339 4..360 916 47.6 Plus
porin-PE 282 CG6647-PE 4..276 83..355 283 26.2 Plus
porin-PD 282 CG6647-PD 4..276 83..355 283 26.2 Plus
porin-PC 282 CG6647-PC 4..276 83..355 283 26.2 Plus
porin-PB 282 CG6647-PB 4..276 83..355 283 26.2 Plus
porin-PA 282 CG6647-PA 4..276 83..355 283 26.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:00:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17809-PA 310 GI17809-PA 17..306 66..357 663 43.5 Plus
Dmoj\GI16915-PA 330 GI16915-PA 13..330 41..361 646 36.4 Plus
Dmoj\GI17807-PA 282 GI17807-PA 4..276 83..355 271 27.1 Plus
Dmoj\GI17808-PA 288 GI17808-PA 4..288 83..361 155 22.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:00:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26381-PA 348 GL26381-PA 3..348 5..361 962 50.4 Plus
Dper\GL26379-PA 282 GL26379-PA 4..276 83..355 265 27.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:00:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16423-PA 348 GA16423-PA 3..348 5..361 961 50.4 Plus
Dpse\GA19750-PA 282 GA19750-PA 4..276 83..355 265 27.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:00:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11391-PA 361 GM11391-PA 1..361 1..361 1797 95.8 Plus
Dsec\GM11380-PA 340 GM11380-PA 3..339 4..360 879 48.2 Plus
Dsec\GM11358-PA 282 GM11358-PA 4..276 83..355 271 27.1 Plus
Dsec\GM11369-PA 293 GM11369-PA 6..293 83..361 155 22.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:00:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22221-PA 361 GD22221-PA 1..361 1..361 1796 95.6 Plus
Dsim\GD22220-PA 340 GD22220-PA 3..339 4..360 884 49 Plus
Dsim\GD22218-PA 282 GD22218-PA 4..276 83..355 271 27.1 Plus
Dsim\GD22219-PA 293 GD22219-PA 6..293 83..361 154 22.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:00:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17636-PA 331 GJ17636-PA 24..327 49..357 729 44.7 Plus
Dvir\GJ17634-PA 320 GJ17634-PA 2..320 41..361 661 38.3 Plus
Dvir\GJ17637-PA 325 GJ17637-PA 2..320 33..356 658 38.6 Plus
Dvir\GJ17635-PA 309 GJ17635-PA 4..309 43..361 649 38.2 Plus
Dvir\GJ17632-PA 304 GJ17632-PA 26..298 83..355 273 27.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:00:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23977-PA 331 GK23977-PA 37..327 67..357 816 50.2 Plus
Dwil\GK23975-PA 502 GK23975-PA 190..498 49..357 772 44.7 Plus
Dwil\GK23974-PA 323 GK23974-PA 29..319 67..357 766 47.8 Plus
Dwil\GK23973-PA 282 GK23973-PA 4..276 83..355 257 27.2 Plus
Dwil\GK23976-PA 292 GK23976-PA 4..292 83..361 159 22.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:00:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13273-PA 359 GE13273-PA 1..359 1..361 1672 89.2 Plus
Dyak\GE13262-PA 342 GE13262-PA 3..341 4..360 912 46.4 Plus
Dyak\porin-PA 282 GE13240-PA 4..276 83..355 271 27.1 Plus