Clone Sequence Records
MIP04782.complete Sequence
1278 bp assembled on 2009-04-07
GenBank Submission: BT081996.1
> MIP04782.complete
TGAAAAAAAAAAATATGTTCGAATTGTCCAAGTTAAGTCATGGCTATGTT
TTCAATCTGGATATCAAACTTTCGATAAACCCATCAACAAATCCAAATTT
GTAGTTTCTCGGCGAGATTGTGGGAGATGTGCTGTGCACCGATGTGTGGG
CCCTCGGTCTGCGGGCCTTCGATGTGCAACCCGCCCGCTTGTCGTGTGCC
ACTGGAGCCACTGCATCCGTCAACAGTCTACCACTGCTGTCCGTCCACGA
AGTGCACGCTGTGCTGTAATAACGAATCAAAACACGAGTGCCACTGCACC
TGCCAGCGCAACAAGCACATCGTGGAGGCGTTCAGCTGCCTGTTCCGGGT
TAGCAAGTTCCAGATCCTGACCACCCTCTTTCTACTGGCCTATCATGAGA
GCAGACCGCTGCCGCGCTTTCCGCGCGATCGCAACTGGTCGGTGATGGAG
AACGTGAAGGCACCGTACTCGGAGTTGCACGACCTGAGGATCTACGACAG
CCTGTTCGATCGCTGTGGCAACCGCATCGATCCGCTCGACCAAAAGAACA
CGTACAAGCTGTTGCGCCTGATCTTTCTCGGTCCAGTGCTGGTGCCCGAT
CAGCAGGCACAGCTACTGGCCATGCTGTACACGCTAAATGCCCATGCCGT
CTGTCCCGTGGATCTCAATGGCCTGCTATCGGTACTGCAGTATGTGAAGC
TGGATGAGCTGGTGTGCGGCATCTTGGAGCAGGACGGACGAGCGAAACGT
TTCCACAGCGGGCGGCAGTGCTTGGAGCTGTGCAATCTCTACCAGAAAGT
GGTCGCCACGGACAAGGATGCGGTTATTAAAAAGCATCGCCGTCGCAAGG
AGAAGTCCAAGAGCAAGGATTCGGAGGCACAGAAGAAGCCGCGTAGAACC
ATCACCGCGCAGATATACTGCACGCGTCGCGTTCCGGAGCCCGAGGATGT
TAGCTCACGGATCGAGACTATCACTCCAATCGTACGCAGTACAGCCACCT
CGTTGCGTCGCTCCTCCAACAAGAAAAGCTGGATGCCGGTCAATCGGAGC
AGCATTAATAACTCGGAGAAGGGATCTCGCCGGGGTTCGCGCAATCTCGC
GGGTTCACCGAAGAGAAACAAGCCGGAAGTGTCCAATGTGGGAGTGCGAA
TGCAGGGCGGCGACCGCCAAAGAACGAAGTGAAGCCACAGTGATTTATAA
GTCTCCCCCATCTGTTTTTAATCTCGGTCCATCTACATTTACTAAATTCC
GTAATGCAAAAAAAAAAAAAAAAAAAAA
MIP04782.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:29:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2898-RA | 1255 | CG2898-RA | 1..1255 | 3..1257 | 6275 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:50:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 10266866..10268120 | 3..1257 | 6185 | 99.5 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:03:59 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:50:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 10375374..10376631 | 3..1260 | 6290 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:46:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 10383472..10384729 | 3..1260 | 6290 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-15 18:50:21 has no hits.
MIP04782.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:51:13 Download gff for
MIP04782.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 10266863..10268120 | 1..1257 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:08:56 Download gff for
MIP04782.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2898-RA | 1..1056 | 127..1182 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:44:18 Download gff for
MIP04782.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2898-RA | 1..1056 | 127..1182 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:33:49 Download gff for
MIP04782.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2898-RA | 1..1056 | 127..1182 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:02:55 Download gff for
MIP04782.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2898-RA | 1..1056 | 127..1182 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-04-07 16:19:50 Download gff for
MIP04782.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2898-RA | 1..1104 | 79..1182 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:44:17 Download gff for
MIP04782.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2898-RA | 1..1255 | 3..1257 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:33:49 Download gff for
MIP04782.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2898-RA | 1..1255 | 3..1257 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:02:55 Download gff for
MIP04782.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2898-RA | 1..1255 | 3..1257 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:51:13 Download gff for
MIP04782.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10375371..10376628 | 1..1257 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:51:13 Download gff for
MIP04782.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10375371..10376628 | 1..1257 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:51:13 Download gff for
MIP04782.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10375371..10376628 | 1..1257 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:33:49 Download gff for
MIP04782.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 10269404..10270661 | 1..1257 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:19:23 Download gff for
MIP04782.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10383469..10384726 | 1..1257 | 99 | | Plus |
MIP04782.pep Sequence
Translation from 126 to 1181
> MIP04782.pep
MCCAPMCGPSVCGPSMCNPPACRVPLEPLHPSTVYHCCPSTKCTLCCNNE
SKHECHCTCQRNKHIVEAFSCLFRVSKFQILTTLFLLAYHESRPLPRFPR
DRNWSVMENVKAPYSELHDLRIYDSLFDRCGNRIDPLDQKNTYKLLRLIF
LGPVLVPDQQAQLLAMLYTLNAHAVCPVDLNGLLSVLQYVKLDELVCGIL
EQDGRAKRFHSGRQCLELCNLYQKVVATDKDAVIKKHRRRKEKSKSKDSE
AQKKPRRTITAQIYCTRRVPEPEDVSSRIETITPIVRSTATSLRRSSNKK
SWMPVNRSSINNSEKGSRRGSRNLAGSPKRNKPEVSNVGVRMQGGDRQRT
K*
MIP04782.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:05:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2898-PA | 351 | CG2898-PA | 1..351 | 1..351 | 1885 | 100 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 16:18:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI15394-PA | 319 | GI15394-PA | 1..302 | 6..297 | 531 | 41.6 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 16:18:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL19295-PA | 326 | GL19295-PA | 32..322 | 37..345 | 486 | 37.7 | Plus |
Dper\GL26526-PA | 294 | GL26526-PA | 32..210 | 52..232 | 356 | 40.4 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 16:18:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA25903-PA | 321 | GA25903-PA | 27..317 | 37..345 | 483 | 37.7 | Plus |
Dpse\GA28969-PA | 429 | GA28969-PA | 28..201 | 57..232 | 352 | 40.4 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 16:18:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ14791-PA | 343 | GJ14791-PA | 79..303 | 59..277 | 489 | 44.4 | Plus |
MIP04782.hyp Sequence
Translation from 126 to 1181
> MIP04782.hyp
MCCAPMCGPSVCGPSMCNPPACRVPLEPLHPSTVYHCCPSTKCTLCCNNE
SKHECHCTCQRNKHIVEAFSCLFRVSKFQILTTLFLLAYHESRPLPRFPR
DRNWSVMENVKAPYSELHDLRIYDSLFDRCGNRIDPLDQKNTYKLLRLIF
LGPVLVPDQQAQLLAMLYTLNAHAVCPVDLNGLLSVLQYVKLDELVCGIL
EQDGRAKRFHSGRQCLELCNLYQKVVATDKDAVIKKHRRRKEKSKSKDSE
AQKKPRRTITAQIYCTRRVPEPEDVSSRIETITPIVRSTATSLRRSSNKK
SWMPVNRSSINNSEKGSRRGSRNLAGSPKRNKPEVSNVGVRMQGGDRQRT
K*
MIP04782.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:47:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2898-PA | 351 | CG2898-PA | 1..351 | 1..351 | 1885 | 100 | Plus |