Clone MIP04889 Report

Search the DGRC for MIP04889

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:48
Well:89
Vector:pOT2
Associated Gene/TranscriptCG30271-RF
Protein status:MIP04889.pep: gold
Sequenced Size:1607

Clone Sequence Records

MIP04889.complete Sequence

1607 bp assembled on 2011-09-06

GenBank Submission: BT128875.1

> MIP04889.complete
CACACACACACACACACTTTGGGTTATTTATTCATGTCAGAAGTTGGAAG
TGCGCGAACAGGACGCAATTATTCCTCCTTGCGACCCTTTGCTTTTGACC
ACAGCAACGGAGACCCGAATTCAACACCTTTCGACCTGGCCAAGAATTAG
TTTGCCAACGTGGCTCAAGCTAGCCAGACGCAAAAAGTACAAACAGTGAT
GCCCATGAATGGACAGGCGGGTGGACAAAATGGACGCAAGCGTCGGGACA
ACGAAGATTTCTCGGTGAAGTTATCCACCATCAGGATCTGGATTCACGAG
AAGGACATTGGCAAGTTGACGCGTATTTTATGGGGTGGCCAGGGCAACAG
ACTATGCCAACAGGCCAGCAACAATGGTCGAGTGAAGCGCTTCCTCGCAG
CCGTTCCCCATGTCATGAATGCCATCAAAGATCTGCACCAGGCGGTCATC
GACAACAATCTGGAGACCGTGCAGGCGCAGCTGGAGCCACCGGTGCCCAG
TGCACTGGTCACCTGCAAGGACGGCAATGGCTTGAACATCATACACAAGG
CCGCCGGACTGGGCCACACCAAGCTGCTGGAATACCTGGTGGGCATTTGG
CCCGAGGGCGCCCATGAGACGGACATTACCGGAAAGACGCCGCTCCACTG
GGCCGCCAGTGCCAAGAACAACATGCGATGCTACACACTGCTCACCCAAG
CGGGTTGCGACGAGGAGGCCGTCGATTATAAAATGAAGACCCCCTCATAC
TATCGCCACAAGCCGCACGAAATCGAGCGCGCCTTCCTGGTTTATGTGCC
GGATGCACCTCGCGTCTCCCCCGACAGCGCCACCGATTGGGACGCCTTGT
GCGATGAGAGTGGAGTGGACAACGGAGCGGGGGGCGATGCCAGCTCCAAG
AAACTGGACATCAAGGTGCCGCCTTCTGTGAATGGCCGAAAATCGCTGGA
CGACAGCCTTGAGAACACCTCGGAGCTAGACACCAACGACGGAATATTGG
AAGAGCTGTAAGCGCGAATGGAGGCGGAGAGGCAGAGGAAAACGGAGTTG
GGCAGGACGAAGGAGGCGGAGGAGATGCGGTAATCGTGGAGAATGGCGAA
GTTCGCGAGGAGGCTCCGGAGGAGGATCAGCCAACAGAGCCCGAGGACGT
GGGAAAACCCGAGGAGTCTGCTACTGAGAGTGAGCTTGAAGGAAACAAAA
AGACTGAAGTGGAGCCAGAGGAGCCAGAGGAGCCAGTGGAGCATGTGGAG
CATGTGGAGCAGGCGGTGGAACAGGCGGAGCAGGTGGAACAGGCGGAGCA
GGTGGAACAGGCGGAGCAGGTGGAACAGGCGGAGCAGGTGGAGCATGAGA
AGCAGGAGACAGTGGATGAGCCGGAGAGCAACGCTAAGGATGAAGCGGAT
CCGGAAGTTGCCGCCATGTCCGTCGAAGAAAGGGAACCAGAGTCAGAGAA
CGATAACGATGACGATGATGAGGTACAGATGGGCGTGCTCTAAGTGTCCG
CAAACGTTTTGTAGTTTATTCACGTTTGTTGTGTGTGCCGTTTGCTCAAC
CCATTTACCCCTCTTCAATGTGAACCTCTAAAATGAAACGCAAAAAAAAA
AAAAAAA

MIP04889.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:55:47
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 18707703..18708320 992..1591 2785 97.1 Plus
chr2R 21145070 chr2R 18706197..18706509 417..729 1565 100 Plus
chr2R 21145070 chr2R 18705138..18705333 1..196 980 100 Plus
chr2R 21145070 chr2R 18706715..18706885 730..900 825 98.8 Plus
chr2R 21145070 chr2R 18705977..18706139 255..417 815 100 Plus
chr2R 21145070 chr2R 18706941..18707034 899..992 470 100 Plus
chr2R 21145070 chr2R 18705461..18705523 194..256 315 100 Plus
chr2R 21145070 chr2R 18707976..18708031 1301..1356 220 92.9 Plus
chr2R 21145070 chr2R 18708030..18708085 1265..1320 220 92.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:55:45
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22821148..22821763 992..1607 3035 99.5 Plus
2R 25286936 2R 22819641..22819953 417..729 1565 100 Plus
2R 25286936 2R 22818582..22818777 1..196 980 100 Plus
2R 25286936 2R 22820159..22820329 730..900 855 100 Plus
2R 25286936 2R 22819421..22819583 255..417 815 100 Plus
2R 25286936 2R 22820385..22820478 899..992 470 100 Plus
2R 25286936 2R 22818905..22818967 194..256 315 100 Plus
2R 25286936 2R 22821421..22821476 1301..1356 220 92.9 Plus
2R 25286936 2R 22821457..22821512 1265..1320 220 92.9 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:01:22
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 22822347..22822962 992..1607 3035 99.5 Plus
2R 25260384 2R 22820840..22821152 417..729 1565 100 Plus
2R 25260384 2R 22819781..22819976 1..196 980 100 Plus
2R 25260384 2R 22821358..22821528 730..900 855 100 Plus
2R 25260384 2R 22820620..22820782 255..417 815 100 Plus
2R 25260384 2R 22821584..22821677 899..992 470 100 Plus
2R 25260384 2R 22820104..22820166 194..256 315 100 Plus
Blast to na_te.dros performed on 2019-03-15 10:55:45 has no hits.

MIP04889.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:56:55 Download gff for MIP04889.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 18705138..18705333 1..196 100 -> Plus
chr2R 18705464..18705523 197..256 100 -> Plus
chr2R 18705979..18706139 257..417 100 -> Plus
chr2R 18706198..18706509 418..729 100 -> Plus
chr2R 18706715..18706885 730..900 98 -> Plus
chr2R 18706943..18707034 901..992 100 -> Plus
chr2R 18707704..18707921 993..1210 100 == Plus
chr2R 18708106..18708320 1377..1591 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-09-06 14:01:44 Download gff for MIP04889.complete
Subject Subject Range Query Range Percent Splice Strand
CG30271-RD 17..814 194..991 100 -> Plus
CG30271-RD 962..1326 992..1355 98 -> Plus
CG30271-RD 1345..1482 1356..1493 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:29:09 Download gff for MIP04889.complete
Subject Subject Range Query Range Percent Splice Strand
CG30271-RF 1..813 199..1011 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:15:35 Download gff for MIP04889.complete
Subject Subject Range Query Range Percent Splice Strand
CG30271-RF 1..813 199..1011 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-06 14:01:43 Download gff for MIP04889.complete
Subject Subject Range Query Range Percent Splice Strand
CG30271-RD 102..899 194..991 100 -> Plus
CG30271-RD 1047..1411 992..1355 98 -> Plus
CG30271-RD 1430..1665 1356..1591 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:29:09 Download gff for MIP04889.complete
Subject Subject Range Query Range Percent Splice Strand
CG30271-RF 1..1337 1..1337 100 -> Plus
CG30271-RF 1356..1609 1338..1591 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:15:35 Download gff for MIP04889.complete
Subject Subject Range Query Range Percent Splice Strand
CG30271-RF 1..1591 1..1591 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:56:55 Download gff for MIP04889.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22820159..22820329 730..900 100 -> Plus
2R 22820387..22820478 901..992 100 -> Plus
2R 22818582..22818777 1..196 100 -> Plus
2R 22818908..22818967 197..256 100 -> Plus
2R 22819423..22819583 257..417 100 -> Plus
2R 22819642..22819953 418..729 100 -> Plus
2R 22821149..22821747 993..1591 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:56:55 Download gff for MIP04889.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22820159..22820329 730..900 100 -> Plus
2R 22820387..22820478 901..992 100 -> Plus
2R 22818582..22818777 1..196 100 -> Plus
2R 22818908..22818967 197..256 100 -> Plus
2R 22819423..22819583 257..417 100 -> Plus
2R 22819642..22819953 418..729 100 -> Plus
2R 22821149..22821747 993..1591 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:56:55 Download gff for MIP04889.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22820159..22820329 730..900 100 -> Plus
2R 22820387..22820478 901..992 100 -> Plus
2R 22818582..22818777 1..196 100 -> Plus
2R 22818908..22818967 197..256 100 -> Plus
2R 22819423..22819583 257..417 100 -> Plus
2R 22819642..22819953 418..729 100 -> Plus
2R 22821149..22821747 993..1591 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:29:09 Download gff for MIP04889.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18706087..18706282 1..196 100 -> Plus
arm_2R 18706413..18706472 197..256 100 -> Plus
arm_2R 18706928..18707088 257..417 100 -> Plus
arm_2R 18707147..18707458 418..729 100 -> Plus
arm_2R 18707664..18707834 730..900 100 -> Plus
arm_2R 18707892..18707983 901..992 100 -> Plus
arm_2R 18708654..18708998 993..1337 100 -> Plus
arm_2R 18709017..18709270 1338..1591 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:47:55 Download gff for MIP04889.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22821358..22821528 730..900 100 -> Plus
2R 22821586..22821677 901..992 100 -> Plus
2R 22820841..22821152 418..729 100 -> Plus
2R 22819781..22819976 1..196 100 -> Plus
2R 22820107..22820166 197..256 100 -> Plus
2R 22820622..22820782 257..417 100 -> Plus
2R 22822348..22822692 993..1337 100 -> Plus
2R 22822711..22822964 1338..1591 100   Plus

MIP04889.hyp Sequence

Translation from 198 to 1010

> MIP04889.hyp
MPMNGQAGGQNGRKRRDNEDFSVKLSTIRIWIHEKDIGKLTRILWGGQGN
RLCQQASNNGRVKRFLAAVPHVMNAIKDLHQAVIDNNLETVQAQLEPPVP
SALVTCKDGNGLNIIHKAAGLGHTKLLEYLVGIWPEGAHETDITGKTPLH
WAASAKNNMRCYTLLTQAGCDEEAVDYKMKTPSYYRHKPHEIERAFLVYV
PDAPRVSPDSATDWDALCDESGVDNGAGGDASSKKLDIKVPPSVNGRKSL
DDSLENTSELDTNDGILEEL*

MIP04889.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:19:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG30271-PF 270 CG30271-PF 1..270 1..270 1439 100 Plus
CG30271-PH 487 CG30271-PH 8..272 1..265 1417 100 Plus
CG30271-PI 501 CG30271-PI 22..286 1..265 1417 100 Plus
CG30271-PG 501 CG30271-PG 22..286 1..265 1417 100 Plus
CG42284-PD 657 CG42284-PD 67..243 19..188 200 29.9 Plus

MIP04889.pep Sequence

Translation from 198 to 1010

> MIP04889.pep
MPMNGQAGGQNGRKRRDNEDFSVKLSTIRIWIHEKDIGKLTRILWGGQGN
RLCQQASNNGRVKRFLAAVPHVMNAIKDLHQAVIDNNLETVQAQLEPPVP
SALVTCKDGNGLNIIHKAAGLGHTKLLEYLVGIWPEGAHETDITGKTPLH
WAASAKNNMRCYTLLTQAGCDEEAVDYKMKTPSYYRHKPHEIERAFLVYV
PDAPRVSPDSATDWDALCDESGVDNGAGGDASSKKLDIKVPPSVNGRKSL
DDSLENTSELDTNDGILEEL*

MIP04889.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 19:33:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13539-PA 472 GF13539-PA 8..273 1..265 1322 91 Plus
Dana\GF13540-PA 222 GF13540-PA 12..185 19..185 203 31.1 Plus
Dana\GF13542-PA 367 GF13542-PA 219..349 55..185 156 30.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:33:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22795-PA 481 GG22795-PA 1..265 1..265 1398 96.6 Plus
Dere\GG22796-PA 306 GG22796-PA 12..188 19..188 204 29.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 19:33:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19788-PA 470 GH19788-PA 1..270 1..265 1221 83.5 Plus
Dgri\GH19790-PA 202 GH19790-PA 3..149 39..185 213 34.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:20:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG30271-PF 270 CG30271-PF 1..270 1..270 1439 100 Plus
CG30271-PI 501 CG30271-PI 22..286 1..265 1417 100 Plus
CG30271-PH 487 CG30271-PH 8..272 1..265 1417 100 Plus
CG30271-PG 501 CG30271-PG 22..286 1..265 1417 100 Plus
CG42284-PD 657 CG42284-PD 67..243 19..188 200 29.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 19:33:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20328-PA 689 GI20328-PA 8..274 1..265 1204 83.6 Plus
Dmoj\GI20328-PA 689 GI20328-PA 472..625 32..185 227 35 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 19:33:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11382-PA 461 GL11382-PA 1..264 1..265 1295 88.7 Plus
Dper\GL11383-PA 218 GL11383-PA 12..188 19..188 221 31.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 19:33:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15740-PA 464 GA15740-PA 1..264 1..265 1298 89.1 Plus
Dpse\GA15736-PA 228 GA15736-PA 12..188 19..188 221 31.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:33:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15953-PA 477 GM15953-PA 8..272 1..265 1431 98.1 Plus
Dsec\GM15954-PA 292 GM15954-PA 12..188 19..188 204 29.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:33:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11706-PA 453 GD11706-PA 1..260 6..265 1398 98.8 Plus
Dsim\GD11707-PA 292 GD11707-PA 12..188 19..188 204 29.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 19:33:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22052-PA 632 GJ22052-PA 8..276 1..265 1234 84.5 Plus
Dvir\GJ22052-PA 632 GJ22052-PA 431..584 32..185 222 33.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 19:33:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21458-PA 455 GK21458-PA 8..267 1..266 1171 82.8 Plus
Dwil\GK21457-PA 275 GK21457-PA 65..239 18..185 230 32 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:33:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14025-PA 473 GE14025-PA 8..273 1..266 1427 98.1 Plus